Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02644

Experiment: PYE with Paraquat dichloride 0.03 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_02643 and CCNA_02644 overlap by 4 nucleotidesCCNA_02644 and CCNA_02645 overlap by 4 nucleotidesCCNA_02645 and CCNA_02646 overlap by 4 nucleotides CCNA_02643: CCNA_02643 - penicillin-binding protein FtsI, at 2,796,353 to 2,798,122 _02643 CCNA_02644: CCNA_02644 - cell division protein FtsL, at 2,798,119 to 2,798,562 _02644 CCNA_02645: CCNA_02645 - S-adenosyl-methyltransferase MraW, at 2,798,559 to 2,799,494 _02645 CCNA_02646: CCNA_02646 - cell division protein MraZ, at 2,799,491 to 2,799,961 _02646 Position (kb) 2798 2799Strain fitness (log2 ratio) -1 0 1 2at 2798.117 kb on + strandat 2798.205 kb on - strand, within CCNA_02644at 2798.576 kb on + strandat 2798.580 kb on - strandat 2799.358 kb on - strand, within CCNA_02645at 2799.438 kb on - strandat 2799.477 kb on - strandat 2799.534 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction PYE with Paraquat dichloride 0.03 mg/ml
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2,798,117 + +1.5
2,798,205 - CCNA_02644 0.19 +1.7
2,798,576 + +0.0
2,798,580 - +2.2
2,799,358 - CCNA_02645 0.85 +0.6
2,799,438 - -0.9
2,799,477 - +0.2
2,799,534 - +1.2

Or see this region's nucleotide sequence