Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02551

Experiment: PYE with Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.03 mg/ml
2,698,263	-		CCNA_02550	0.22	+1.6
2,698,270	+		CCNA_02550	0.23	+0.6
2,698,320	-		CCNA_02550	0.27	+1.4
2,698,342	-		CCNA_02550	0.29	-0.9
2,698,343	-		CCNA_02550	0.29	-1.0
2,698,345	+		CCNA_02550	0.29	-0.1
2,698,348	+		CCNA_02550	0.29	+0.3
2,698,348	+		CCNA_02550	0.29	-1.2
2,698,361	-		CCNA_02550	0.30	+1.4
2,698,388	-		CCNA_02550	0.32	+2.0
2,698,390	+		CCNA_02550	0.32	+1.3
2,698,390	+		CCNA_02550	0.32	+1.3
2,698,390	+		CCNA_02550	0.32	-0.4
2,698,390	+		CCNA_02550	0.32	+1.0
2,698,398	-		CCNA_02550	0.33	-0.8
2,698,398	-		CCNA_02550	0.33	-1.8
2,698,398	-		CCNA_02550	0.33	+1.6
2,698,405	+		CCNA_02550	0.34	-0.1
2,698,428	+		CCNA_02550	0.35	+0.4
2,698,436	-		CCNA_02550	0.36	-1.3
2,698,436	-		CCNA_02550	0.36	-0.2
2,698,453	-		CCNA_02550	0.37	+0.7
2,698,458	-		CCNA_02550	0.38	-0.4
2,698,487	-		CCNA_02550	0.40	+0.6
2,698,541	+		CCNA_02550	0.44	+0.6
2,698,544	-		CCNA_02550	0.45	-1.0
2,698,554	-		CCNA_02550	0.45	+1.6
2,698,561	-		CCNA_02550	0.46	+0.2
2,698,612	+		CCNA_02550	0.50	-0.4
2,698,647	+		CCNA_02550	0.53	-0.2
2,698,647	-		CCNA_02550	0.53	+0.6
2,698,657	+		CCNA_02550	0.54	-1.3
2,698,667	+		CCNA_02550	0.54	-1.8
2,698,703	-		CCNA_02550	0.57	-2.4
2,698,721	+		CCNA_02550	0.59	-1.4
2,698,763	+		CCNA_02550	0.62	-0.4
2,698,771	-		CCNA_02550	0.63	-0.4
2,698,776	-		CCNA_02550	0.63	-1.2
2,698,820	-		CCNA_02550	0.67	+1.1
2,698,863	-		CCNA_02550	0.70	-0.7
2,698,996	+		CCNA_02550	0.81	-1.0
2,698,996	+		CCNA_02550	0.81	+1.4
2,698,996	+		CCNA_02550	0.81	+1.3
2,699,004	-				+3.5
2,699,004	-		CCNA_02550	0.81	+0.6
2,699,014	-		CCNA_02550	0.82	+1.4
2,699,014	-		CCNA_02550	0.82	-0.0
2,699,015	-		CCNA_02550	0.82	-0.8
2,699,017	+		CCNA_02550	0.82	+1.2
2,699,017	+		CCNA_02550	0.82	+1.0
2,699,025	-		CCNA_02550	0.83	-1.0
2,699,051	-		CCNA_02550	0.85	+2.1
2,699,058	+		CCNA_02550	0.86	-1.4
2,699,058	+		CCNA_02550	0.86	-0.4
2,699,060	+		CCNA_02550	0.86	-1.1
2,699,066	-		CCNA_02550	0.86	+0.6
2,699,069	+		CCNA_02550	0.86	-0.3
2,699,087	-		CCNA_02550	0.88	-1.2
2,699,092	-		CCNA_02550	0.88	+0.7
2,699,092	-		CCNA_02550	0.88	-0.8
2,699,150	+				-1.0
2,699,151	-				-1.2
2,699,206	+				-2.1
2,699,246	+				-0.1
2,699,254	-				-1.8
2,699,254	-				-1.0
2,699,254	-				+0.3
2,699,254	-				-2.1
2,699,254	-				-2.4
2,699,261	+		CCNA_02551	0.13	-1.6
2,699,269	-				+2.9
2,699,282	-		CCNA_02551	0.24	+1.2
2,699,309	+		CCNA_02551	0.37	+2.3
2,699,309	+		CCNA_02551	0.37	+1.9
2,699,309	+		CCNA_02551	0.37	+3.2
2,699,369	+		CCNA_02551	0.68	+2.5
2,699,374	+		CCNA_02551	0.71	+0.7
2,699,382	-		CCNA_02551	0.75	+3.1
2,699,382	-		CCNA_02551	0.75	+0.5
2,699,384	+		CCNA_02551	0.76	+1.0
2,699,385	+		CCNA_02551	0.76	+0.3
2,699,393	-		CCNA_02551	0.81	+0.9
2,699,442	+				+0.3
2,699,442	+				-1.4
2,699,455	-				-0.8
2,699,491	+		CCNA_02552	0.10	+2.9
2,699,491	+		CCNA_02552	0.10	+3.4
2,699,499	-		CCNA_02552	0.13	+1.6
2,699,499	-		CCNA_02552	0.13	+0.6
2,699,671	+		CCNA_02552	0.65	+3.6
2,699,696	-		CCNA_02552	0.72	+1.5
2,699,711	+		CCNA_02552	0.77	+2.7
2,699,762	+				+3.2
2,699,780	+				+2.0
2,699,780	+				+2.1
2,699,788	-				+0.5
2,699,788	-				+2.0
2,699,794	+				+2.7
2,699,799	+				+3.0
2,699,819	+				+0.5
2,699,819	+				+2.1
2,699,819	+				+2.6
2,699,819	+				+1.4
2,699,827	-				+1.2
2,699,827	-				-0.7
2,699,828	+				+2.1
2,699,828	+				+2.0
2,699,829	+				+2.7
2,699,829	+				+2.7
2,699,829	+				+2.1
2,699,830	+				+2.3
2,699,838	-				+1.0
2,699,860	-				+2.2
2,699,862	+				+1.4
2,699,891	+				+2.3
2,699,937	-				-0.3
2,699,965	+				+2.5
2,699,975	-				-0.9
2,699,982	-				+1.5
2,699,998	+				+2.9
2,700,148	+		CCNA_02553	0.15	+2.5
2,700,183	+		CCNA_02553	0.16	+2.6
2,700,191	-		CCNA_02553	0.17	-0.8
2,700,195	+		CCNA_02553	0.17	+2.8
2,700,203	-		CCNA_02553	0.17	-0.5
2,700,261	+		CCNA_02553	0.20	+3.0
2,700,269	-		CCNA_02553	0.20	+0.7
2,700,280	+		CCNA_02553	0.21	+1.6
2,700,312	+		CCNA_02553	0.22	+3.6
2,700,353	+		CCNA_02553	0.24	+2.7
2,700,361	-		CCNA_02553	0.24	+0.3
2,700,381	+		CCNA_02553	0.25	+3.5
2,700,389	-		CCNA_02553	0.25	+2.5
2,700,430	+		CCNA_02553	0.27	+3.2
2,700,430	+		CCNA_02553	0.27	+2.7