Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02171

Experiment: PYE with Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.03 mg/ml
2,322,308	+		CCNA_02169	0.58	+0.2
2,322,316	+		CCNA_02169	0.60	+0.5
2,322,318	+		CCNA_02169	0.60	-1.7
2,322,348	+		CCNA_02169	0.67	-0.9
2,322,398	+		CCNA_02169	0.78	+0.4
2,322,435	-		CCNA_02169	0.86	+1.0
2,322,439	-		CCNA_02169	0.87	-1.0
2,322,442	+		CCNA_02169	0.88	+0.7
2,322,442	+		CCNA_02169	0.88	-0.2
2,322,450	-		CCNA_02169	0.89	-1.5
2,322,450	-		CCNA_02169	0.89	-2.3
2,322,453	+				+0.6
2,322,453	+				-0.2
2,322,471	-				-1.9
2,322,481	-				-1.4
2,322,524	+				-0.1
2,322,571	+				+0.5
2,322,579	-				-0.2
2,322,579	-				-1.9
2,322,579	-				+0.7
2,322,579	-				-0.3
2,322,581	+				-1.4
2,322,581	+				-0.1
2,322,581	+				-0.2
2,322,581	+				+0.3
2,322,581	+				-2.1
2,322,581	+				+1.3
2,322,583	-				+0.2
2,322,589	-				+0.3
2,322,589	-				-1.5
2,322,589	-				+0.0
2,322,589	-				-2.2
2,322,589	-				-2.1
2,322,589	-				-1.4
2,322,589	-				-3.3
2,322,589	-				-0.0
2,322,589	-				+0.9
2,322,611	+				-0.7
2,322,619	-				-0.1
2,322,620	+				-0.2
2,322,683	-		CCNA_02170	0.11	-0.5
2,322,698	-		CCNA_02170	0.13	-0.0
2,322,808	+		CCNA_02170	0.31	-0.1
2,322,808	+		CCNA_02170	0.31	-1.8
2,322,816	-		CCNA_02170	0.32	-1.2
2,322,816	-		CCNA_02170	0.32	+0.4
2,322,816	-		CCNA_02170	0.32	+1.1
2,322,816	-		CCNA_02170	0.32	+0.2
2,322,895	+		CCNA_02170	0.45	-1.6
2,323,005	-		CCNA_02170	0.63	+0.0
2,323,010	-		CCNA_02170	0.63	-0.7
2,323,010	-		CCNA_02170	0.63	+0.5
2,323,066	+		CCNA_02170	0.72	+0.7
2,323,066	+		CCNA_02170	0.72	-0.3
2,323,067	-		CCNA_02170	0.73	-0.0
2,323,074	-		CCNA_02170	0.74	+0.9
2,323,129	-		CCNA_02170	0.83	-2.0
2,323,153	-		CCNA_02170	0.86	+1.0
2,323,172	+		CCNA_02170	0.89	-0.2
2,323,204	+				-3.0
2,323,204	+				+1.0
2,323,212	-				+0.1
2,323,296	-				+1.9
2,323,390	-				+2.6
2,323,484	+		CCNA_02171	0.14	+2.5
2,323,492	-		CCNA_02171	0.15	+2.7
2,323,497	-		CCNA_02171	0.15	+2.6
2,323,497	-		CCNA_02171	0.15	+1.0
2,323,508	+		CCNA_02171	0.16	-1.7
2,323,516	+		CCNA_02171	0.17	-0.5
2,323,531	-		CCNA_02171	0.18	+2.2
2,323,532	+		CCNA_02171	0.18	-1.5
2,323,540	-		CCNA_02171	0.19	+1.4
2,323,575	+		CCNA_02171	0.21	-1.1
2,323,603	+		CCNA_02171	0.24	-1.6
2,323,631	+		CCNA_02171	0.26	-2.5
2,323,631	+		CCNA_02171	0.26	-1.0
2,323,631	+		CCNA_02171	0.26	-0.9
2,323,644	-		CCNA_02171	0.27	+2.2
2,323,664	-		CCNA_02171	0.28	+1.9
2,323,664	-		CCNA_02171	0.28	+1.9
2,323,716	-		CCNA_02171	0.32	+0.6
2,323,732	+		CCNA_02171	0.34	-0.9
2,323,732	+		CCNA_02171	0.34	+0.9
2,323,740	-		CCNA_02171	0.34	+1.4
2,323,750	+		CCNA_02171	0.35	-0.3
2,323,755	+		CCNA_02171	0.36	+0.2
2,323,763	-		CCNA_02171	0.36	+1.4
2,323,763	-		CCNA_02171	0.36	+2.1
2,323,763	-		CCNA_02171	0.36	+2.2
2,323,788	-		CCNA_02171	0.38	+2.6
2,323,796	-		CCNA_02171	0.39	+2.1
2,323,825	+		CCNA_02171	0.41	-1.0
2,323,832	+		CCNA_02171	0.42	+2.2
2,323,833	-		CCNA_02171	0.42	+0.9
2,323,833	-		CCNA_02171	0.42	+2.6
2,323,845	-		CCNA_02171	0.43	+2.0
2,323,851	+		CCNA_02171	0.43	-0.0
2,323,859	-		CCNA_02171	0.44	+3.0
2,323,867	+		CCNA_02171	0.44	-0.1
2,323,938	-		CCNA_02171	0.50	+1.8
2,323,939	+		CCNA_02171	0.50	+1.9
2,323,958	+		CCNA_02171	0.51	-1.5
2,323,963	+		CCNA_02171	0.52	+0.5
2,323,963	+		CCNA_02171	0.52	+0.1
2,323,983	-		CCNA_02171	0.53	+1.9
2,323,988	-		CCNA_02171	0.54	+2.1
2,323,988	-		CCNA_02171	0.54	+2.5
2,323,993	+		CCNA_02171	0.54	-1.5
2,324,016	-		CCNA_02171	0.56	+0.7
2,324,029	-		CCNA_02171	0.57	+1.7
2,324,041	+		CCNA_02171	0.58	+1.9
2,324,044	+		CCNA_02171	0.58	+0.7
2,324,049	-		CCNA_02171	0.58	+2.1
2,324,089	+		CCNA_02171	0.62	-0.2
2,324,104	-		CCNA_02171	0.63	+1.5
2,324,126	+		CCNA_02171	0.64	+0.0
2,324,131	+		CCNA_02171	0.65	+0.8
2,324,179	+		CCNA_02171	0.69	+0.3
2,324,185	+		CCNA_02171	0.69	+1.9
2,324,185	+				+2.5
2,324,188	-		CCNA_02171	0.69	+2.6
2,324,226	-		CCNA_02171	0.72	+2.8
2,324,245	-		CCNA_02171	0.74	+1.5
2,324,252	-		CCNA_02171	0.74	+0.6
2,324,252	-		CCNA_02171	0.74	+2.3
2,324,314	-		CCNA_02171	0.79	+2.4
2,324,314	-		CCNA_02171	0.79	+1.7
2,324,314	-		CCNA_02171	0.79	+2.5
2,324,314	-		CCNA_02171	0.79	+1.4
2,324,314	-		CCNA_02171	0.79	+1.2
2,324,355	-		CCNA_02171	0.82	+2.2
2,324,356	+		CCNA_02171	0.82	-2.1
2,324,356	+		CCNA_02171	0.82	+0.0
2,324,370	-		CCNA_02171	0.84	+2.6
2,324,377	+		CCNA_02171	0.84	-0.1
2,324,385	-		CCNA_02171	0.85	+2.3
2,324,385	-		CCNA_02171	0.85	+1.5
2,324,385	-		CCNA_02171	0.85	+1.9
2,324,414	-		CCNA_02171	0.87	+1.8
2,324,417	+		CCNA_02171	0.87	-1.4
2,324,425	-		CCNA_02171	0.88	+1.5
2,324,446	-		CCNA_02171	0.89	+1.5
2,324,483	+				-1.2
2,324,484	-				+2.0
2,324,496	-				+2.3
2,324,526	+				-1.6
2,324,526	+				-0.2
2,324,526	+				+0.3
2,324,528	+				-1.2
2,324,529	-				+2.2
2,324,534	-				+0.9
2,324,534	-				+1.3
2,324,534	-				+1.3
2,324,534	-				+2.0
2,324,534	-				+3.6
2,324,536	-				+1.7
2,324,539	+				+0.7
2,324,547	-				+1.9
2,324,554	+				+0.5
2,324,554	+				-1.6
2,324,562	-				+1.3
2,324,592	-				+3.4
2,324,624	+				-1.3
2,324,624	+				+1.2
2,324,645	-				-0.0
2,324,649	+				+2.3
2,324,692	-				+1.2
2,324,718	+				-1.4
2,324,718	+				-0.2
2,324,719	-				+1.9
2,324,730	-				+1.2
2,324,785	-				+0.3
2,324,815	+				+0.3
2,324,845	+				-0.1
2,324,853	-				-0.9
2,324,874	+				+0.9
2,324,902	-				-1.3
2,324,950	+				-1.0
2,324,968	+				+0.3
2,324,985	+				-0.9
2,325,012	+		CCNA_02172	0.10	+0.9
2,325,020	-		CCNA_02172	0.11	-2.1
2,325,022	+		CCNA_02172	0.11	-0.4
2,325,079	+		CCNA_02172	0.16	-1.3
2,325,079	+		CCNA_02172	0.16	+0.2
2,325,088	+		CCNA_02172	0.16	+0.5
2,325,089	-		CCNA_02172	0.17	-1.3
2,325,110	+		CCNA_02172	0.18	-1.5
2,325,123	+		CCNA_02172	0.19	-1.2
2,325,123	+		CCNA_02172	0.19	-0.5
2,325,131	-		CCNA_02172	0.20	+0.3
2,325,143	-		CCNA_02172	0.21	+0.8
2,325,157	+		CCNA_02172	0.22	+0.3
2,325,210	+		CCNA_02172	0.27	-1.0
2,325,215	+		CCNA_02172	0.27	+0.2
2,325,218	-		CCNA_02172	0.27	+2.2
2,325,218	-				+1.2
2,325,247	+		CCNA_02172	0.30	+1.0
2,325,255	-		CCNA_02172	0.30	+0.8
2,325,360	+		CCNA_02172	0.39	-1.0
2,325,360	+		CCNA_02172	0.39	-1.0
2,325,362	-		CCNA_02172	0.39	-0.8
2,325,367	+		CCNA_02172	0.40	-0.2
2,325,375	-		CCNA_02172	0.40	+1.4
2,325,378	+		CCNA_02172	0.40	-0.1
2,325,385	-		CCNA_02172	0.41	-2.4
2,325,396	+		CCNA_02172	0.42	-1.3
2,325,402	-		CCNA_02172	0.42	-1.0
2,325,414	-		CCNA_02172	0.43	-1.1
2,325,422	+		CCNA_02172	0.44	-2.3
2,325,441	-		CCNA_02172	0.46	-2.3
2,325,442	+		CCNA_02172	0.46	+0.6
2,325,491	+		CCNA_02172	0.50	+0.7
2,325,501	+		CCNA_02172	0.51	-1.5
2,325,546	+		CCNA_02172	0.54	-0.1
2,325,554	-		CCNA_02172	0.55	-1.1