Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01643

Experiment: PYE with Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.03 mg/ml
1,762,786	+		CCNA_01641	0.88	+0.6
1,762,791	+		CCNA_01641	0.89	+0.4
1,762,808	-				+0.5
1,762,899	+				+0.7
1,762,899	+				-2.5
1,762,942	+				-0.2
1,762,942	+				-1.2
1,762,983	+				-1.4
1,763,115	-		CCNA_01642	0.27	-1.3
1,763,125	+		CCNA_01642	0.28	-1.5
1,763,133	-		CCNA_01642	0.29	+0.3
1,763,238	+		CCNA_01642	0.43	-0.2
1,763,284	-		CCNA_01642	0.49	+0.3
1,763,295	-		CCNA_01642	0.50	-0.3
1,763,307	-		CCNA_01642	0.52	+1.0
1,763,314	+		CCNA_01642	0.53	-0.7
1,763,314	+		CCNA_01642	0.53	+0.3
1,763,314	+		CCNA_01642	0.53	-0.2
1,763,314	+		CCNA_01642	0.53	+1.4
1,763,314	+		CCNA_01642	0.53	-0.2
1,763,322	-		CCNA_01642	0.54	-1.5
1,763,372	-		CCNA_01642	0.60	-0.5
1,763,400	+		CCNA_01642	0.64	-0.5
1,763,418	+		CCNA_01642	0.66	-0.9
1,763,426	-		CCNA_01642	0.67	-0.2
1,763,438	-		CCNA_01642	0.69	-0.5
1,763,445	-		CCNA_01642	0.70	-1.9
1,763,513	-		CCNA_01642	0.79	-0.1
1,763,526	+		CCNA_01642	0.80	-0.9
1,763,546	-		CCNA_01642	0.83	-1.8
1,763,580	-		CCNA_01642	0.87	+0.3
1,763,714	+				-0.5
1,763,722	-				+0.9
1,763,792	-				+1.8
1,763,792	-				+1.1
1,763,912	-		CCNA_01643	0.23	+2.1
1,763,924	+		CCNA_01643	0.25	-1.2
1,763,924	+		CCNA_01643	0.25	+0.3
1,763,924	+		CCNA_01643	0.25	-2.9
1,763,927	-		CCNA_01643	0.25	+2.8
1,763,931	-		CCNA_01643	0.26	+2.2
1,763,932	-		CCNA_01643	0.26	+2.5
1,763,944	-		CCNA_01643	0.27	+2.7
1,763,965	-		CCNA_01643	0.30	+1.9
1,764,031	-		CCNA_01643	0.38	+2.1
1,764,064	+		CCNA_01643	0.41	+3.6
1,764,072	-		CCNA_01643	0.42	+2.1
1,764,117	+		CCNA_01643	0.48	+1.0
1,764,130	-		CCNA_01643	0.49	+2.2
1,764,167	-		CCNA_01643	0.54	+2.0
1,764,183	-		CCNA_01643	0.56	+2.1
1,764,221	+		CCNA_01643	0.60	+1.1
1,764,229	-		CCNA_01643	0.61	+1.7
1,764,230	-		CCNA_01643	0.61	+1.6
1,764,248	+		CCNA_01643	0.63	-2.0
1,764,313	+		CCNA_01643	0.71	-0.6
1,764,313	+		CCNA_01643	0.71	+1.2
1,764,321	-		CCNA_01643	0.72	+1.7
1,764,375	-		CCNA_01643	0.78	+2.0
1,764,380	+		CCNA_01643	0.79	+0.9
1,764,396	+		CCNA_01643	0.81	+0.3
1,764,411	+		CCNA_01643	0.83	-0.2
1,764,419	-		CCNA_01643	0.84	+3.8
1,764,419	-		CCNA_01643	0.84	+1.5
1,764,421	+		CCNA_01643	0.84	-0.1
1,764,450	+		CCNA_01643	0.87	-0.2
1,764,464	+		CCNA_01643	0.89	+1.9
1,764,500	+				+0.0
1,764,500	+				+0.0
1,764,555	+				+0.5
1,764,555	+				+1.5
1,764,555	+				-1.2
1,764,560	+				+0.5
1,764,563	-				-1.2
1,764,563	-				-1.4
1,764,563	-				-0.5
1,764,588	-				+0.3
1,764,629	+				+0.7
1,764,663	-				+0.6
1,764,671	-				-0.5
1,764,673	+				-0.5
1,764,738	+				-0.4
1,764,748	+		CCNA_01644	0.10	-2.0
1,764,753	+		CCNA_01644	0.11	+1.5
1,764,756	-		CCNA_01644	0.11	+1.8
1,764,761	-		CCNA_01644	0.12	+0.5
1,764,761	-		CCNA_01644	0.12	+0.6
1,764,796	+		CCNA_01644	0.16	-0.5
1,764,885	+		CCNA_01644	0.26	-1.4
1,764,922	-		CCNA_01644	0.30	+0.6
1,764,922	-		CCNA_01644	0.30	+1.3
1,764,933	+		CCNA_01644	0.31	+2.0
1,764,950	+		CCNA_01644	0.33	-1.3
1,764,978	-		CCNA_01644	0.36	+2.0
1,765,010	+		CCNA_01644	0.39	+0.0
1,765,012	+		CCNA_01644	0.40	+1.4
1,765,036	+		CCNA_01644	0.42	+0.8
1,765,064	-		CCNA_01644	0.45	+1.1
1,765,064	-		CCNA_01644	0.45	+1.8
1,765,084	+		CCNA_01644	0.48	-1.6
1,765,092	-		CCNA_01644	0.49	+2.7
1,765,094	+		CCNA_01644	0.49	-0.7
1,765,094	+				+2.3
1,765,102	-		CCNA_01644	0.50	+0.1
1,765,102	-		CCNA_01644	0.50	+0.5
1,765,102	-		CCNA_01644	0.50	+0.1
1,765,120	+		CCNA_01644	0.52	+1.8
1,765,123	-		CCNA_01644	0.52	-0.0
1,765,129	+		CCNA_01644	0.53	-0.9
1,765,138	-		CCNA_01644	0.54	+0.5
1,765,147	-		CCNA_01644	0.55	-1.0
1,765,171	+		CCNA_01644	0.57	-0.5
1,765,211	+		CCNA_01644	0.62	-0.3
1,765,219	-		CCNA_01644	0.63	+1.5
1,765,219	-		CCNA_01644	0.63	-0.1
1,765,224	-		CCNA_01644	0.63	+0.5
1,765,231	+		CCNA_01644	0.64	+0.8
1,765,238	+		CCNA_01644	0.65	+0.7
1,765,240	-		CCNA_01644	0.65	+0.6
1,765,349	+		CCNA_01644	0.77	+1.0
1,765,374	+		CCNA_01644	0.80	-0.4
1,765,382	-		CCNA_01644	0.81	+0.7
1,765,390	+		CCNA_01644	0.82	-2.2
1,765,395	+		CCNA_01644	0.82	+1.5
1,765,462	-		CCNA_01644	0.90	+1.2
1,765,514	-				+0.1
1,765,546	+				+2.2