Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01297

Experiment: PYE with Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.03 mg/ml
1,421,157	+		CCNA_01296	0.54	-0.7
1,421,157	+		CCNA_01296	0.54	-1.2
1,421,157	+		CCNA_01296	0.54	-0.5
1,421,164	-		CCNA_01296	0.54	-0.1
1,421,218	+		CCNA_01296	0.57	+0.0
1,421,219	+		CCNA_01296	0.57	-0.7
1,421,226	-		CCNA_01296	0.57	+0.5
1,421,231	+		CCNA_01296	0.58	+0.6
1,421,238	-		CCNA_01296	0.58	+0.6
1,421,239	-		CCNA_01296	0.58	+0.8
1,421,268	-		CCNA_01296	0.60	-1.2
1,421,337	-		CCNA_01296	0.63	-1.4
1,421,369	-		CCNA_01296	0.65	+1.5
1,421,373	-		CCNA_01296	0.65	+0.6
1,421,390	+		CCNA_01296	0.66	-0.7
1,421,390	+		CCNA_01296	0.66	+1.0
1,421,437	-		CCNA_01296	0.68	+0.8
1,421,526	-		CCNA_01296	0.73	+1.1
1,421,547	+		CCNA_01296	0.74	+2.0
1,421,547	+		CCNA_01296	0.74	+1.6
1,421,547	+		CCNA_01296	0.74	+0.5
1,421,547	+		CCNA_01296	0.74	+0.9
1,421,555	-		CCNA_01296	0.74	-1.6
1,421,555	-		CCNA_01296	0.74	+1.1
1,421,600	-		CCNA_01296	0.77	+0.6
1,421,600	-		CCNA_01296	0.77	+0.9
1,421,616	+		CCNA_01296	0.78	-0.9
1,421,621	+		CCNA_01296	0.78	-0.2
1,421,626	+		CCNA_01296	0.78	-1.6
1,421,631	+		CCNA_01296	0.78	-2.7
1,421,634	-		CCNA_01296	0.79	+0.5
1,421,639	-		CCNA_01296	0.79	+1.1
1,421,643	+		CCNA_01296	0.79	+3.1
1,421,649	+		CCNA_01296	0.79	-1.7
1,421,651	-		CCNA_01296	0.79	+1.6
1,421,651	-		CCNA_01296	0.79	+0.1
1,421,697	+		CCNA_01296	0.82	-2.0
1,421,705	-		CCNA_01296	0.82	-1.3
1,421,724	+		CCNA_01296	0.83	-0.3
1,421,724	+		CCNA_01296	0.83	+0.3
1,421,724	+		CCNA_01296	0.83	+0.0
1,421,732	-		CCNA_01296	0.84	+0.8
1,421,732	-		CCNA_01296	0.84	+0.3
1,421,757	+		CCNA_01296	0.85	-1.8
1,421,757	+		CCNA_01296	0.85	-0.1
1,421,757	+		CCNA_01296	0.85	-1.3
1,421,757	+		CCNA_01296	0.85	-1.1
1,421,757	+		CCNA_01296	0.85	-0.6
1,421,764	-		CCNA_01296	0.85	+0.7
1,421,765	-		CCNA_01296	0.85	-0.4
1,421,765	-		CCNA_01296	0.85	-0.2
1,421,813	-		CCNA_01296	0.88	-0.8
1,421,817	+		CCNA_01296	0.88	-0.1
1,421,822	+		CCNA_01296	0.88	-1.6
1,421,825	-		CCNA_01296	0.88	+0.9
1,421,825	-		CCNA_01296	0.88	-0.6
1,421,825	-		CCNA_01296	0.88	-1.1
1,421,830	-		CCNA_01296	0.89	+3.4
1,421,835	-		CCNA_01296	0.89	+0.7
1,421,860	-				-1.0
1,421,883	-				+0.9
1,421,911	-				+2.9
1,421,955	-				+0.9
1,422,034	-				+0.9
1,422,199	-				+2.4
1,422,225	-				-2.9
1,422,226	+				-1.1
1,422,272	+		CCNA_01297	0.14	-0.1
1,422,325	-		CCNA_01297	0.20	+0.5
1,422,363	-		CCNA_01297	0.25	-0.3
1,422,395	+		CCNA_01297	0.29	+0.1
1,422,400	+		CCNA_01297	0.29	-1.8
1,422,405	+		CCNA_01297	0.30	+0.4
1,422,434	+		CCNA_01297	0.33	-1.2
1,422,458	+		CCNA_01297	0.36	-0.8
1,422,458	+		CCNA_01297	0.36	-1.8
1,422,459	-		CCNA_01297	0.36	+0.6
1,422,487	+		CCNA_01297	0.40	+0.2
1,422,512	-		CCNA_01297	0.43	+0.0
1,422,536	-		CCNA_01297	0.46	+0.3
1,422,537	-		CCNA_01297	0.46	-1.3
1,422,542	+		CCNA_01297	0.46	-0.3
1,422,588	+		CCNA_01297	0.52	-2.0
1,422,600	+		CCNA_01297	0.53	+1.3
1,422,608	-		CCNA_01297	0.54	-1.1
1,422,657	+		CCNA_01297	0.60	-0.3
1,422,665	-		CCNA_01297	0.61	+0.0
1,422,680	+		CCNA_01297	0.63	-0.1
1,422,681	-		CCNA_01297	0.63	-2.3
1,422,691	-		CCNA_01297	0.64	-0.6
1,422,723	+		CCNA_01297	0.68	-1.1
1,422,724	+		CCNA_01297	0.68	+0.6
1,422,724	+		CCNA_01297	0.68	-0.3
1,422,732	-		CCNA_01297	0.69	+1.6
1,422,742	-		CCNA_01297	0.70	+0.8
1,422,749	+		CCNA_01297	0.71	-0.1
1,422,808	+		CCNA_01297	0.78	-0.7
1,422,886	+		CCNA_01297	0.87	-0.1
1,422,894	-		CCNA_01297	0.88	+1.2
1,422,894	-		CCNA_01297	0.88	-0.8
1,422,894	-		CCNA_01297	0.88	+0.6
1,423,289	+				+2.5
1,423,297	-				-0.2
1,423,444	+				+1.5
1,423,478	+				+1.8
1,423,478	+				+1.7
1,423,486	-				+2.8