Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01061

Experiment: PYE with Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.03 mg/ml
1,163,863	+		CCNA_01060	0.49	+3.5
1,164,163	+		CCNA_01060	0.66	+3.6
1,164,355	+		CCNA_01060	0.77	+3.5
1,164,416	+		CCNA_01060	0.81	+3.6
1,164,441	+		CCNA_01060	0.82	+3.0
1,164,548	+		CCNA_01060	0.88	+2.9
1,164,696	-				+1.6
1,164,696	-				+0.2
1,164,734	+				+1.3
1,164,773	+				+0.7
1,164,773	+				+0.8
1,164,892	+				+3.3
1,164,918	-				+1.8
1,164,944	+				+2.9
1,164,992	+		CCNA_01061	0.13	+3.5
1,165,050	+		CCNA_01061	0.18	+4.3
1,165,087	+		CCNA_01061	0.20	+2.7
1,165,166	+		CCNA_01061	0.26	+3.5
1,165,204	-		CCNA_01061	0.29	+2.3
1,165,293	-		CCNA_01061	0.36	+0.1
1,165,367	+		CCNA_01061	0.42	+3.7
1,165,518	+		CCNA_01061	0.53	+3.5
1,165,526	-		CCNA_01061	0.54	+2.6
1,165,559	-		CCNA_01061	0.56	-1.2
1,165,559	-		CCNA_01061	0.56	+0.5
1,165,705	+		CCNA_01061	0.68	+3.9
1,165,713	-		CCNA_01061	0.68	+0.3
1,165,891	+		CCNA_01061	0.82	+2.6
1,166,068	+				+2.4
1,166,133	-				-0.2
1,166,137	+				+1.5
1,166,137	+				+1.8
1,166,154	-				-1.8
1,166,205	+				+1.0
1,166,230	+				+1.4
1,166,230	+				+1.0
1,166,238	-				-1.8
1,166,290	-				-1.4
1,166,308	+				+1.6
1,166,316	-				-1.1
1,166,316	-				+1.3
1,166,321	-				+0.1
1,166,338	+				+2.0
1,166,344	+				+1.5
1,166,344	+				+0.8
1,166,344	+				+1.6
1,166,344	+				+0.9
1,166,344	+				+0.8
1,166,352	-				+0.7
1,166,352	-				+0.9
1,166,352	-				-0.9
1,166,386	-		CCNA_01062	0.12	+0.7
1,166,420	-		CCNA_01062	0.15	+0.4
1,166,452	+		CCNA_01062	0.19	+1.4
1,166,468	+		CCNA_01062	0.20	+1.5
1,166,506	+		CCNA_01062	0.24	+1.3
1,166,507	+		CCNA_01062	0.24	+2.4
1,166,515	-		CCNA_01062	0.25	-0.7
1,166,522	+		CCNA_01062	0.26	+2.1
1,166,522	+		CCNA_01062	0.26	+1.6
1,166,522	+		CCNA_01062	0.26	+1.9
1,166,543	+		CCNA_01062	0.28	+1.4
1,166,579	+		CCNA_01062	0.32	+0.4
1,166,587	-		CCNA_01062	0.32	-2.0
1,166,599	+		CCNA_01062	0.34	+1.5
1,166,635	+		CCNA_01062	0.37	+1.0
1,166,667	+		CCNA_01062	0.41	+0.3
1,166,675	-		CCNA_01062	0.41	-0.7
1,166,675	-		CCNA_01062	0.41	-0.3
1,166,704	+		CCNA_01062	0.44	+1.1
1,166,712	-		CCNA_01062	0.45	-0.6
1,166,737	+		CCNA_01062	0.48	+2.1
1,166,737	+		CCNA_01062	0.48	+2.1
1,166,737	+		CCNA_01062	0.48	+1.4
1,166,737	+		CCNA_01062	0.48	+1.2
1,166,737	+		CCNA_01062	0.48	+1.8
1,166,737	+		CCNA_01062	0.48	+1.4
1,166,737	+		CCNA_01062	0.48	+1.5
1,166,737	+		CCNA_01062	0.48	+2.0
1,166,737	+		CCNA_01062	0.48	+3.5
1,166,745	-		CCNA_01062	0.49	+1.7
1,166,745	-		CCNA_01062	0.49	+0.5
1,166,745	-		CCNA_01062	0.49	-1.2
1,166,745	-		CCNA_01062	0.49	-2.6
1,166,751	+		CCNA_01062	0.49	+1.1
1,166,755	-		CCNA_01062	0.50	+1.2
1,166,759	-		CCNA_01062	0.50	+0.5
1,166,761	+		CCNA_01062	0.50	+2.0
1,166,775	+		CCNA_01062	0.52	+1.2
1,166,775	+		CCNA_01062	0.52	+1.3
1,166,775	+		CCNA_01062	0.52	+0.9
1,166,783	-		CCNA_01062	0.52	+0.3
1,166,898	+		CCNA_01062	0.64	+1.5
1,166,898	-		CCNA_01062	0.64	+1.2
1,166,934	-		CCNA_01062	0.68	-0.3
1,166,947	+		CCNA_01062	0.69	+2.6
1,166,947	+		CCNA_01062	0.69	+1.6
1,166,947	+		CCNA_01062	0.69	+0.7
1,166,947	+		CCNA_01062	0.69	+1.1
1,166,955	-		CCNA_01062	0.70	-0.3
1,166,955	-		CCNA_01062	0.70	-0.3
1,166,955	-		CCNA_01062	0.70	-0.7
1,166,955	-		CCNA_01062	0.70	-0.6
1,166,962	-		CCNA_01062	0.71	-0.5
1,166,988	-		CCNA_01062	0.73	-0.6
1,167,014	+		CCNA_01062	0.76	+1.9
1,167,019	+		CCNA_01062	0.77	+1.7
1,167,019	+		CCNA_01062	0.77	+1.1
1,167,019	+		CCNA_01062	0.77	+1.9
1,167,019	+		CCNA_01062	0.77	+1.2
1,167,019	+		CCNA_01062	0.77	+1.4
1,167,019	+		CCNA_01062	0.77	+1.6
1,167,019	+		CCNA_01062	0.77	+0.6
1,167,019	+		CCNA_01062	0.77	+1.9
1,167,019	+		CCNA_01062	0.77	+0.4
1,167,022	-		CCNA_01062	0.77	-0.5
1,167,027	-		CCNA_01062	0.77	+1.6
1,167,027	-		CCNA_01062	0.77	-1.1
1,167,027	-		CCNA_01062	0.77	+1.8
1,167,027	-		CCNA_01062	0.77	-0.5
1,167,027	-		CCNA_01062	0.77	-0.7
1,167,027	-		CCNA_01062	0.77	-0.5
1,167,027	-		CCNA_01062	0.77	-1.5
1,167,027	-		CCNA_01062	0.77	-1.8
1,167,027	-		CCNA_01062	0.77	-1.1
1,167,037	+		CCNA_01062	0.78	+1.2
1,167,039	+		CCNA_01062	0.79	+0.3
1,167,065	+		CCNA_01062	0.81	+3.0
1,167,083	-		CCNA_01062	0.83	-0.4