Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00103

Experiment: PYE with Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.03 mg/ml
112,473	-		CCNA_00101	0.56	+1.7
112,494	-		CCNA_00101	0.58	-2.2
112,494	-		CCNA_00101	0.58	+0.3
112,496	+		CCNA_00101	0.58	+1.5
112,496	+		CCNA_00101	0.58	-1.7
112,515	+		CCNA_00101	0.60	-1.3
112,532	+		CCNA_00101	0.61	-0.5
112,624	-		CCNA_00101	0.68	-1.8
112,667	+		CCNA_00101	0.71	+1.0
112,667	+		CCNA_00101	0.71	+0.0
112,667	+		CCNA_00101	0.71	-2.3
112,672	+		CCNA_00101	0.72	+0.4
112,675	-		CCNA_00101	0.72	-0.7
112,675	-		CCNA_00101	0.72	-1.5
112,675	-		CCNA_00101	0.72	+0.2
112,726	+		CCNA_00101	0.76	-0.4
112,727	-		CCNA_00101	0.76	-1.3
112,744	+		CCNA_00101	0.77	-2.8
112,760	-		CCNA_00101	0.79	+1.1
112,760	-		CCNA_00101	0.79	-0.8
112,760	-		CCNA_00101	0.79	-0.2
112,765	+		CCNA_00101	0.79	-0.1
112,766	-		CCNA_00101	0.79	+1.1
112,825	-		CCNA_00101	0.84	-0.1
112,838	-		CCNA_00101	0.85	-0.9
112,851	+		CCNA_00101	0.86	-1.5
112,851	+		CCNA_00101	0.86	-1.4
112,858	-		CCNA_00101	0.86	-2.0
112,859	-		CCNA_00101	0.86	-1.0
112,859	-		CCNA_00101	0.86	+0.3
112,859	-		CCNA_00101	0.86	-0.5
112,859	-		CCNA_00101	0.86	-0.5
112,859	-		CCNA_00101	0.86	+0.7
112,859	-		CCNA_00101	0.86	-0.8
112,859	-		CCNA_00101	0.86	-0.2
112,859	-		CCNA_00101	0.86	-0.5
112,871	+		CCNA_00101	0.87	-3.5
112,871	+		CCNA_00101	0.87	-0.6
112,871	+		CCNA_00101	0.87	-2.2
112,871	+		CCNA_00101	0.87	-2.1
112,871	+		CCNA_00101	0.87	-0.9
112,871	+		CCNA_00101	0.87	-1.4
112,879	-		CCNA_00101	0.88	-1.0
112,879	-		CCNA_00101	0.88	+0.1
112,879	-		CCNA_00101	0.88	-1.1
112,879	-		CCNA_00101	0.88	-0.1
112,879	-		CCNA_00101	0.88	-1.0
112,879	-		CCNA_00101	0.88	-1.5
112,879	-		CCNA_00101	0.88	-3.1
112,879	-		CCNA_00101	0.88	+0.1
112,879	-		CCNA_00101	0.88	-1.0
112,906	-				-0.3
112,908	+				+0.8
112,908	+				-1.3
112,916	-				-2.4
112,916	-				-2.9
112,916	-				+0.7
112,916	-				+0.0
112,916	-				-2.9
112,916	-				-2.8
112,944	+				+0.2
112,953	-				+0.4
112,963	+				-1.0
112,968	+				-1.1
112,984	+				+0.4
112,984	+				-0.6
112,991	-				-0.1
112,991	-				-0.8
112,997	-				-2.8
113,018	-				-0.2
113,022	+				-0.3
113,022	+				-1.0
113,030	-				-1.6
113,030	-				-0.4
113,030	-				-2.2
113,030	-				+1.7
113,054	-				-2.9
113,077	-				-0.4
113,080	+				+0.4
113,099	+				-0.2
113,176	-		CCNA_00102	0.11	-1.7
113,185	+		CCNA_00102	0.15	-0.2
113,201	-		CCNA_00102	0.22	+0.5
113,217	+		CCNA_00102	0.29	-2.1
113,218	-		CCNA_00102	0.30	-2.2
113,225	-		CCNA_00102	0.33	-1.4
113,225	-		CCNA_00102	0.33	-1.5
113,225	-		CCNA_00102	0.33	+0.2
113,225	-		CCNA_00102	0.33	-1.7
113,225	-		CCNA_00102	0.33	-1.3
113,225	-		CCNA_00102	0.33	+0.0
113,280	+		CCNA_00102	0.57	+0.4
113,317	+		CCNA_00102	0.74	+0.6
113,317	+		CCNA_00102	0.74	-1.3
113,317	+		CCNA_00102	0.74	-0.9
113,317	+		CCNA_00102	0.74	-2.3
113,377	+				-0.1
113,389	+				+0.5
113,461	+				-0.3
113,469	-				-1.5
113,469	-				+2.0
113,478	+				+0.2
113,585	+				-0.2
113,590	+				+0.2
113,658	+		CCNA_00103	0.11	+1.2
113,681	+		CCNA_00103	0.13	+0.3
113,682	+		CCNA_00103	0.13	-0.5
113,750	+		CCNA_00103	0.17	-0.2
113,758	+		CCNA_00103	0.17	-2.0
113,766	-		CCNA_00103	0.18	-0.9
113,770	-		CCNA_00103	0.18	-1.2
113,797	-		CCNA_00103	0.20	+6.8
113,800	+		CCNA_00103	0.20	-2.6
113,828	+		CCNA_00103	0.21	+0.0
113,828	+		CCNA_00103	0.21	+1.8
113,828	+		CCNA_00103	0.21	+0.3
113,836	-		CCNA_00103	0.22	-0.9
113,836	-		CCNA_00103	0.22	-0.1
113,854	+		CCNA_00103	0.23	+1.8
113,880	+		CCNA_00103	0.25	+0.1
113,896	+		CCNA_00103	0.26	+1.1
113,899	-		CCNA_00103	0.26	-1.5
113,899	-		CCNA_00103	0.26	-2.2
113,904	-		CCNA_00103	0.26	-0.4
113,915	-		CCNA_00103	0.27	-0.8
113,921	+		CCNA_00103	0.27	-0.9
113,929	-		CCNA_00103	0.27	+0.4
113,929	-		CCNA_00103	0.27	+0.2
113,929	-		CCNA_00103	0.27	-0.5
113,929	-		CCNA_00103	0.27	-0.4
113,934	+		CCNA_00103	0.28	+1.0
113,934	+		CCNA_00103	0.28	-0.2
113,942	-		CCNA_00103	0.28	+0.5
113,954	-		CCNA_00103	0.29	-0.2
113,982	-		CCNA_00103	0.31	-0.4
114,015	+		CCNA_00103	0.33	-0.0
114,038	+		CCNA_00103	0.34	-2.4
114,059	+		CCNA_00103	0.35	-1.3
114,086	+		CCNA_00103	0.37	+1.8
114,103	+		CCNA_00103	0.38	-0.6
114,103	+		CCNA_00103	0.38	-2.5
114,111	-		CCNA_00103	0.38	+1.5
114,117	+		CCNA_00103	0.39	-0.0
114,146	+		CCNA_00103	0.40	-1.3
114,146	+		CCNA_00103	0.40	-0.3
114,146	+		CCNA_00103	0.40	-1.7
114,154	-		CCNA_00103	0.41	-1.1
114,188	-		CCNA_00103	0.43	+0.9
114,211	+		CCNA_00103	0.44	-1.4
114,211	+		CCNA_00103	0.44	-1.0
114,214	-		CCNA_00103	0.44	-0.2
114,257	-		CCNA_00103	0.47	-2.7
114,271	+		CCNA_00103	0.48	+0.3
114,271	+		CCNA_00103	0.48	+1.0
114,271	+		CCNA_00103	0.48	+0.5
114,271	+		CCNA_00103	0.48	-1.5
114,271	+		CCNA_00103	0.48	-1.5
114,271	+		CCNA_00103	0.48	+0.2
114,276	+		CCNA_00103	0.48	+1.0
114,279	-		CCNA_00103	0.48	-1.4
114,286	+		CCNA_00103	0.48	-0.0
114,309	-		CCNA_00103	0.50	+0.2
114,329	+		CCNA_00103	0.51	-1.9
114,348	-		CCNA_00103	0.52	-0.2
114,367	+		CCNA_00103	0.53	-0.3
114,367	-		CCNA_00103	0.53	-2.5
114,372	+		CCNA_00103	0.54	+0.3
114,372	+		CCNA_00103	0.54	+1.2
114,372	+		CCNA_00103	0.54	-2.5
114,372	+		CCNA_00103	0.54	-0.9
114,398	-		CCNA_00103	0.55	+1.0
114,399	-		CCNA_00103	0.55	-1.4
114,430	-		CCNA_00103	0.57	+0.1
114,505	-		CCNA_00103	0.61	+1.0
114,522	-		CCNA_00103	0.62	+0.7
114,548	+		CCNA_00103	0.64	-0.8
114,556	-		CCNA_00103	0.64	+0.5
114,556	-		CCNA_00103	0.64	-0.5
114,556	-		CCNA_00103	0.64	+0.9
114,578	+		CCNA_00103	0.66	-0.3
114,634	+		CCNA_00103	0.69	-0.2
114,634	+		CCNA_00103	0.69	-0.3
114,634	+		CCNA_00103	0.69	+0.9
114,634	+		CCNA_00103	0.69	+0.7
114,639	+		CCNA_00103	0.69	-0.3
114,642	-		CCNA_00103	0.69	-1.8
114,663	+		CCNA_00103	0.71	-1.7
114,671	+		CCNA_00103	0.71	+0.5
114,679	-		CCNA_00103	0.72	+0.1
114,684	+		CCNA_00103	0.72	-0.7
114,692	-		CCNA_00103	0.72	+0.4
114,721	-		CCNA_00103	0.74	-1.0
114,732	-		CCNA_00103	0.75	+0.5
114,821	+		CCNA_00103	0.80	+0.3
114,891	-		CCNA_00103	0.84	-0.8
114,906	+		CCNA_00103	0.85	-1.6
114,922	-		CCNA_00103	0.86	-2.4
114,926	-		CCNA_00103	0.86	-1.0
114,966	-		CCNA_00103	0.89	-0.6
115,004	-				+0.1
115,005	-				-0.5
115,007	+				-0.3
115,010	-				+1.5
115,019	+				+1.2
115,019	+				-2.3
115,020	-				-0.8
115,043	+				+1.2
115,043	+				-0.2
115,092	+				-0.4
115,092	+				+0.3
115,108	-				-1.3
115,112	+				+0.9
115,138	+				-1.6
115,138	+				-1.0
115,138	+				-0.4
115,138	+				-0.2
115,138	+				+0.3
115,138	+				-2.9
115,146	-				+2.0
115,146	-				+0.4
115,176	+				+0.4
115,176	+				+1.4
115,176	+				+0.4
115,176	+				+1.2
115,176	+				+0.9
115,176	+				+0.8
115,176	+				+0.4
115,184	-				-0.8
115,184	-				+1.4
115,184	-				-0.2
115,184	-				-0.7
115,184	-				-0.8
115,184	-				-0.3
115,184	-				+0.2
115,212	-				-0.8
115,255	-				-1.2
115,282	+				+0.7
115,289	-				+0.8
115,375	-		CCNA_00104	0.12	+1.4
115,395	+		CCNA_00104	0.15	-0.4
115,448	-		CCNA_00104	0.23	+2.0
115,508	+		CCNA_00104	0.31	+0.3
115,508	+		CCNA_00104	0.31	+0.6
115,508	+		CCNA_00104	0.31	+1.5
115,516	-		CCNA_00104	0.32	-0.9
115,516	-		CCNA_00104	0.32	-0.6
115,549	-		CCNA_00104	0.37	+1.1
115,551	+		CCNA_00104	0.37	+0.5
115,551	+		CCNA_00104	0.37	+1.2
115,556	+		CCNA_00104	0.38	-1.6
115,556	+		CCNA_00104	0.38	+1.5
115,559	-		CCNA_00104	0.38	+1.2
115,562	+		CCNA_00104	0.39	-0.8
115,564	-		CCNA_00104	0.39	+0.5
115,564	-		CCNA_00104	0.39	+1.5
115,577	+		CCNA_00104	0.41	-0.2
115,618	-		CCNA_00104	0.47	+1.1
115,651	-		CCNA_00104	0.52	-1.5
115,651	-		CCNA_00104	0.52	+2.4
115,651	-		CCNA_00104	0.52	+1.1
115,667	-		CCNA_00104	0.54	+0.3
115,731	+		CCNA_00104	0.63	+1.0
115,739	-		CCNA_00104	0.64	+0.5
115,746	-		CCNA_00104	0.65	-2.0
115,756	+		CCNA_00104	0.67	-0.6
115,760	+		CCNA_00104	0.67	-0.9
115,760	+		CCNA_00104	0.67	+0.7
115,762	-		CCNA_00104	0.67	+1.2
115,763	-		CCNA_00104	0.68	+1.0
115,768	-		CCNA_00104	0.68	+2.1
115,780	-		CCNA_00104	0.70	-0.0
115,802	-		CCNA_00104	0.73	+0.8
115,827	+		CCNA_00104	0.77	+0.4
115,852	+		CCNA_00104	0.80	+0.1
115,884	-		CCNA_00104	0.85	-0.0
115,916	-		CCNA_00104	0.89	-1.1
115,954	+				-1.8
115,955	-				+1.5
115,967	+				-2.1
115,978	+				+0.9
115,986	-				+1.2
116,018	+				-1.2
116,025	-				+1.0
116,039	+				-1.1
116,064	-				-0.9