Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00102

Experiment: PYE with Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.03 mg/ml
112,156	-		CCNA_00101	0.32	-0.5
112,211	-		CCNA_00101	0.36	-1.4
112,247	+		CCNA_00101	0.39	-0.8
112,255	-		CCNA_00101	0.40	-1.5
112,301	+		CCNA_00101	0.43	+0.2
112,369	+		CCNA_00101	0.48	-1.5
112,369	+		CCNA_00101	0.48	+0.1
112,369	+		CCNA_00101	0.48	+0.6
112,429	-		CCNA_00101	0.53	+1.3
112,434	+		CCNA_00101	0.53	-1.3
112,458	-		CCNA_00101	0.55	-0.8
112,458	-		CCNA_00101	0.55	-0.2
112,473	-		CCNA_00101	0.56	+1.7
112,494	-		CCNA_00101	0.58	-2.2
112,494	-		CCNA_00101	0.58	+0.3
112,496	+		CCNA_00101	0.58	+1.5
112,496	+		CCNA_00101	0.58	-1.7
112,515	+		CCNA_00101	0.60	-1.3
112,532	+		CCNA_00101	0.61	-0.5
112,624	-		CCNA_00101	0.68	-1.8
112,667	+		CCNA_00101	0.71	+1.0
112,667	+		CCNA_00101	0.71	+0.0
112,667	+		CCNA_00101	0.71	-2.3
112,672	+		CCNA_00101	0.72	+0.4
112,675	-		CCNA_00101	0.72	-0.7
112,675	-		CCNA_00101	0.72	-1.5
112,675	-		CCNA_00101	0.72	+0.2
112,726	+		CCNA_00101	0.76	-0.4
112,727	-		CCNA_00101	0.76	-1.3
112,744	+		CCNA_00101	0.77	-2.8
112,760	-		CCNA_00101	0.79	+1.1
112,760	-		CCNA_00101	0.79	-0.8
112,760	-		CCNA_00101	0.79	-0.2
112,765	+		CCNA_00101	0.79	-0.1
112,766	-		CCNA_00101	0.79	+1.1
112,825	-		CCNA_00101	0.84	-0.1
112,838	-		CCNA_00101	0.85	-0.9
112,851	+		CCNA_00101	0.86	-1.5
112,851	+		CCNA_00101	0.86	-1.4
112,858	-		CCNA_00101	0.86	-2.0
112,859	-		CCNA_00101	0.86	-1.0
112,859	-		CCNA_00101	0.86	+0.3
112,859	-		CCNA_00101	0.86	-0.5
112,859	-		CCNA_00101	0.86	-0.5
112,859	-		CCNA_00101	0.86	+0.7
112,859	-		CCNA_00101	0.86	-0.8
112,859	-		CCNA_00101	0.86	-0.2
112,859	-		CCNA_00101	0.86	-0.5
112,871	+		CCNA_00101	0.87	-3.5
112,871	+		CCNA_00101	0.87	-0.6
112,871	+		CCNA_00101	0.87	-2.2
112,871	+		CCNA_00101	0.87	-2.1
112,871	+		CCNA_00101	0.87	-0.9
112,871	+		CCNA_00101	0.87	-1.4
112,879	-		CCNA_00101	0.88	-1.0
112,879	-		CCNA_00101	0.88	+0.1
112,879	-		CCNA_00101	0.88	-1.1
112,879	-		CCNA_00101	0.88	-0.1
112,879	-		CCNA_00101	0.88	-1.0
112,879	-		CCNA_00101	0.88	-1.5
112,879	-		CCNA_00101	0.88	-3.1
112,879	-		CCNA_00101	0.88	+0.1
112,879	-		CCNA_00101	0.88	-1.0
112,906	-				-0.3
112,908	+				+0.8
112,908	+				-1.3
112,916	-				-2.4
112,916	-				-2.9
112,916	-				+0.7
112,916	-				+0.0
112,916	-				-2.9
112,916	-				-2.8
112,944	+				+0.2
112,953	-				+0.4
112,963	+				-1.0
112,968	+				-1.1
112,984	+				+0.4
112,984	+				-0.6
112,991	-				-0.1
112,991	-				-0.8
112,997	-				-2.8
113,018	-				-0.2
113,022	+				-0.3
113,022	+				-1.0
113,030	-				-1.6
113,030	-				-0.4
113,030	-				-2.2
113,030	-				+1.7
113,054	-				-2.9
113,077	-				-0.4
113,080	+				+0.4
113,099	+				-0.2
113,176	-		CCNA_00102	0.11	-1.7
113,185	+		CCNA_00102	0.15	-0.2
113,201	-		CCNA_00102	0.22	+0.5
113,217	+		CCNA_00102	0.29	-2.1
113,218	-		CCNA_00102	0.30	-2.2
113,225	-		CCNA_00102	0.33	-1.4
113,225	-		CCNA_00102	0.33	-1.5
113,225	-		CCNA_00102	0.33	+0.2
113,225	-		CCNA_00102	0.33	-1.7
113,225	-		CCNA_00102	0.33	-1.3
113,225	-		CCNA_00102	0.33	+0.0
113,280	+		CCNA_00102	0.57	+0.4
113,317	+		CCNA_00102	0.74	+0.6
113,317	+		CCNA_00102	0.74	-1.3
113,317	+		CCNA_00102	0.74	-0.9
113,317	+		CCNA_00102	0.74	-2.3
113,377	+				-0.1
113,389	+				+0.5
113,461	+				-0.3
113,469	-				-1.5
113,469	-				+2.0
113,478	+				+0.2
113,585	+				-0.2
113,590	+				+0.2
113,658	+		CCNA_00103	0.11	+1.2
113,681	+		CCNA_00103	0.13	+0.3
113,682	+		CCNA_00103	0.13	-0.5
113,750	+		CCNA_00103	0.17	-0.2
113,758	+		CCNA_00103	0.17	-2.0
113,766	-		CCNA_00103	0.18	-0.9
113,770	-		CCNA_00103	0.18	-1.2
113,797	-		CCNA_00103	0.20	+6.8
113,800	+		CCNA_00103	0.20	-2.6
113,828	+		CCNA_00103	0.21	+0.0
113,828	+		CCNA_00103	0.21	+1.8
113,828	+		CCNA_00103	0.21	+0.3
113,836	-		CCNA_00103	0.22	-0.9
113,836	-		CCNA_00103	0.22	-0.1
113,854	+		CCNA_00103	0.23	+1.8
113,880	+		CCNA_00103	0.25	+0.1
113,896	+		CCNA_00103	0.26	+1.1
113,899	-		CCNA_00103	0.26	-1.5
113,899	-		CCNA_00103	0.26	-2.2
113,904	-		CCNA_00103	0.26	-0.4
113,915	-		CCNA_00103	0.27	-0.8
113,921	+		CCNA_00103	0.27	-0.9
113,929	-		CCNA_00103	0.27	+0.4
113,929	-		CCNA_00103	0.27	+0.2
113,929	-		CCNA_00103	0.27	-0.5
113,929	-		CCNA_00103	0.27	-0.4
113,934	+		CCNA_00103	0.28	+1.0
113,934	+		CCNA_00103	0.28	-0.2
113,942	-		CCNA_00103	0.28	+0.5
113,954	-		CCNA_00103	0.29	-0.2
113,982	-		CCNA_00103	0.31	-0.4
114,015	+		CCNA_00103	0.33	-0.0
114,038	+		CCNA_00103	0.34	-2.4
114,059	+		CCNA_00103	0.35	-1.3
114,086	+		CCNA_00103	0.37	+1.8
114,103	+		CCNA_00103	0.38	-0.6
114,103	+		CCNA_00103	0.38	-2.5
114,111	-		CCNA_00103	0.38	+1.5
114,117	+		CCNA_00103	0.39	-0.0
114,146	+		CCNA_00103	0.40	-1.3
114,146	+		CCNA_00103	0.40	-0.3
114,146	+		CCNA_00103	0.40	-1.7
114,154	-		CCNA_00103	0.41	-1.1
114,188	-		CCNA_00103	0.43	+0.9
114,211	+		CCNA_00103	0.44	-1.4
114,211	+		CCNA_00103	0.44	-1.0
114,214	-		CCNA_00103	0.44	-0.2
114,257	-		CCNA_00103	0.47	-2.7
114,271	+		CCNA_00103	0.48	+0.3
114,271	+		CCNA_00103	0.48	+1.0
114,271	+		CCNA_00103	0.48	+0.5
114,271	+		CCNA_00103	0.48	-1.5
114,271	+		CCNA_00103	0.48	-1.5
114,271	+		CCNA_00103	0.48	+0.2
114,276	+		CCNA_00103	0.48	+1.0
114,279	-		CCNA_00103	0.48	-1.4
114,286	+		CCNA_00103	0.48	-0.0
114,309	-		CCNA_00103	0.50	+0.2
114,329	+		CCNA_00103	0.51	-1.9
114,348	-		CCNA_00103	0.52	-0.2
114,367	+		CCNA_00103	0.53	-0.3
114,367	-		CCNA_00103	0.53	-2.5
114,372	+		CCNA_00103	0.54	+0.3
114,372	+		CCNA_00103	0.54	+1.2
114,372	+		CCNA_00103	0.54	-2.5
114,372	+		CCNA_00103	0.54	-0.9