Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00079

Experiment: PYE with Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.03 mg/ml
82,418	-		CCNA_00078	0.49	+1.3
82,418	-		CCNA_00078	0.49	+1.4
82,459	+		CCNA_00078	0.52	-0.6
82,476	+		CCNA_00078	0.53	-1.7
82,510	+		CCNA_00078	0.54	-0.4
82,619	-		CCNA_00078	0.61	+1.0
82,637	+		CCNA_00078	0.62	+0.3
82,679	-		CCNA_00078	0.64	+1.9
82,682	+		CCNA_00078	0.64	+1.8
82,690	-		CCNA_00078	0.64	+2.3
82,690	-		CCNA_00078	0.64	+1.5
82,710	+		CCNA_00078	0.66	+1.4
82,715	+		CCNA_00078	0.66	+1.5
82,718	-		CCNA_00078	0.66	+1.8
82,718	-		CCNA_00078	0.66	+1.9
82,742	-		CCNA_00078	0.67	+1.6
82,793	-		CCNA_00078	0.70	+2.0
82,802	+		CCNA_00078	0.71	+2.1
82,802	+		CCNA_00078	0.71	+0.8
82,802	+		CCNA_00078	0.71	-0.2
82,810	-		CCNA_00078	0.71	-0.1
82,810	-		CCNA_00078	0.71	+1.9
82,810	-		CCNA_00078	0.71	+1.4
82,810	-		CCNA_00078	0.71	+1.5
82,828	-		CCNA_00078	0.72	+1.3
82,828	-		CCNA_00078	0.72	+1.5
82,939	+		CCNA_00078	0.78	+1.0
82,947	-		CCNA_00078	0.79	+0.0
83,004	-		CCNA_00078	0.82	+1.7
83,004	-		CCNA_00078	0.82	+0.8
83,043	-		CCNA_00078	0.84	+1.9
83,060	-		CCNA_00078	0.85	+0.7
83,074	+		CCNA_00078	0.86	+0.9
83,112	+		CCNA_00078	0.88	+0.5
83,118	-		CCNA_00078	0.88	+1.7
83,121	+		CCNA_00078	0.89	-0.1
83,127	-		CCNA_00078	0.89	+1.4
83,181	+				+0.4
83,189	-				+1.5
83,189	-				+1.5
83,189	-				+1.2
83,208	-				+1.8
83,218	-				+0.1
83,271	-				+0.1
83,287	+				+0.0
83,287	+				+1.0
83,287	+				-0.7
83,287	+				+2.0
83,295	-				+2.0
83,295	-				+1.4
83,295	-				+1.6
83,296	-				+2.0
83,333	+				+0.5
83,341	-				-1.5
83,341	-				+0.9
83,389	-				+1.3
83,469	-		CCNA_00079	0.11	+1.1
83,494	-		CCNA_00079	0.17	+3.4
83,494	-		CCNA_00079	0.17	+2.3
83,502	-		CCNA_00079	0.18	+2.7
83,579	+		CCNA_00079	0.34	+0.1
83,587	-		CCNA_00079	0.36	+1.7
83,597	+		CCNA_00079	0.38	-1.1
83,612	-		CCNA_00079	0.41	+1.8
83,630	+		CCNA_00079	0.45	+1.2
83,638	-		CCNA_00079	0.47	+2.7
83,762	+		CCNA_00079	0.72	-2.9
83,770	-		CCNA_00079	0.74	+2.2
83,770	-		CCNA_00079	0.74	+1.2
83,783	+		CCNA_00079	0.77	-0.8
83,791	-		CCNA_00079	0.79	+2.4
83,805	+		CCNA_00079	0.81	+0.4
83,837	-		CCNA_00079	0.88	+1.3
83,882	-				+1.4
83,903	+				-1.3
83,949	-				+0.7
83,960	+				+3.5
83,968	-				-0.7
83,968	-				+0.6
84,015	-				-0.5
84,022	-				-1.9
84,046	+				+1.6
84,046	+				-1.8
84,549	-		CCNA_00080	0.72	+1.5
84,551	+		CCNA_00080	0.72	+0.5
84,594	+		CCNA_00080	0.79	-0.4
84,645	+		CCNA_00080	0.87	+0.4
84,645	+		CCNA_00080	0.87	+3.5
84,653	-		CCNA_00080	0.88	-0.0
84,745	+				+0.5
84,753	-				+1.0
84,758	-				-0.0
84,759	+				+1.2
84,761	+				+0.6
84,761	+				+1.1
84,769	-				+0.8
84,769	-				+1.2
84,769	-				-1.7
84,830	+		CCNA_00081	0.32	-1.5
84,830	+		CCNA_00081	0.32	+0.0
84,838	-		CCNA_00081	0.36	-0.0
84,838	-		CCNA_00081	0.36	+2.0
84,840	+		CCNA_00081	0.37	-0.3
84,843	-		CCNA_00081	0.38	-0.1
84,863	+		CCNA_00081	0.48	-0.2
84,873	+		CCNA_00081	0.52	+0.2
84,878	+		CCNA_00081	0.55	+0.7
84,878	+		CCNA_00081	0.55	+1.1
84,878	+		CCNA_00081	0.55	-0.0
84,878	+		CCNA_00081	0.55	-0.6
84,884	+		CCNA_00081	0.58	+0.3
84,886	-		CCNA_00081	0.59	+0.0
84,886	-		CCNA_00081	0.59	+1.1