Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08815

Experiment: soil sample 6; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil sample 6; outgrowth in LB
1,870,364	+		ABZR87_RS08805	0.11	+0.4
1,870,364	+		ABZR87_RS08805	0.11	+0.1
1,870,445	+		ABZR87_RS08805	0.21	-0.7
1,870,445	+		ABZR87_RS08805	0.21	-0.6
1,870,445	+		ABZR87_RS08805	0.21	+0.1
1,870,446	-		ABZR87_RS08805	0.21	+0.1
1,870,446	-		ABZR87_RS08805	0.21	-1.1
1,870,475	+		ABZR87_RS08805	0.25	+0.1
1,870,476	-		ABZR87_RS08805	0.25	+0.1
1,870,476	-		ABZR87_RS08805	0.25	-0.9
1,870,854	-		ABZR87_RS08805	0.74	-1.0
1,870,854	-		ABZR87_RS08805	0.74	-1.4
1,870,854	-		ABZR87_RS08805	0.74	+0.6
1,870,854	-		ABZR87_RS08805	0.74	-0.7
1,870,854	-		ABZR87_RS08805	0.74	+0.0
1,870,854	-		ABZR87_RS08805	0.74	-0.6
1,870,854	-		ABZR87_RS08805	0.74	+0.4
1,870,905	+		ABZR87_RS08805	0.80	+0.1
1,870,906	-		ABZR87_RS08805	0.81	-0.5
1,870,989	+				+0.9
1,870,989	+				-1.4
1,871,175	+		ABZR87_RS08810	0.45	+0.2
1,871,176	-		ABZR87_RS08810	0.46	-0.5
1,871,176	-		ABZR87_RS08810	0.46	+1.3
1,871,188	+		ABZR87_RS08810	0.62	-0.3
1,871,189	-		ABZR87_RS08810	0.64	+0.9
1,871,189	-		ABZR87_RS08810	0.64	-0.1
1,871,193	+		ABZR87_RS08810	0.69	+0.2
1,871,194	-		ABZR87_RS08810	0.70	-0.8
1,871,194	-		ABZR87_RS08810	0.70	-1.1
1,871,194	-		ABZR87_RS08810	0.70	-0.8
1,871,194	-		ABZR87_RS08810	0.70	+1.0
1,871,196	+		ABZR87_RS08810	0.73	+0.1
1,871,196	+		ABZR87_RS08810	0.73	+0.2
1,871,196	+		ABZR87_RS08810	0.73	-0.4
1,871,196	+		ABZR87_RS08810	0.73	-1.3
1,871,196	+		ABZR87_RS08810	0.73	+0.5
1,871,197	-		ABZR87_RS08810	0.74	-0.6
1,871,197	-		ABZR87_RS08810	0.74	+0.2
1,871,202	+		ABZR87_RS08810	0.81	+0.9
1,871,202	+		ABZR87_RS08810	0.81	-0.1
1,871,203	-		ABZR87_RS08810	0.82	+0.3
1,871,204	+		ABZR87_RS08810	0.84	+0.4
1,871,204	+		ABZR87_RS08810	0.84	-0.3
1,871,204	+		ABZR87_RS08810	0.84	-0.2
1,871,204	+		ABZR87_RS08810	0.84	+2.3
1,871,205	-		ABZR87_RS08810	0.85	-0.3
1,871,205	-		ABZR87_RS08810	0.85	-0.7
1,871,230	+				+0.3
1,871,230	+				-0.6
1,871,308	-				+0.1
1,871,308	-				+0.6
1,871,308	-				-0.6
1,871,396	-		ABZR87_RS08815	0.14	+0.6
1,871,396	-		ABZR87_RS08815	0.14	+0.1
1,871,396	-		ABZR87_RS08815	0.14	-0.4
1,871,430	+		ABZR87_RS08815	0.19	+0.3
1,871,430	+		ABZR87_RS08815	0.19	-0.0
1,871,430	+		ABZR87_RS08815	0.19	+0.1
1,871,431	-		ABZR87_RS08815	0.19	-0.0
1,871,431	-		ABZR87_RS08815	0.19	-0.5
1,871,431	-		ABZR87_RS08815	0.19	-0.2
1,871,439	+		ABZR87_RS08815	0.20	+0.2
1,871,440	-		ABZR87_RS08815	0.21	+2.9
1,871,440	-		ABZR87_RS08815	0.21	-0.7
1,871,440	-		ABZR87_RS08815	0.21	-1.3
1,871,440	-		ABZR87_RS08815	0.21	+0.6
1,871,582	+		ABZR87_RS08815	0.42	+1.0
1,871,583	-		ABZR87_RS08815	0.43	-0.1
1,871,583	-		ABZR87_RS08815	0.43	+0.2
1,871,583	-		ABZR87_RS08815	0.43	+0.3
1,871,583	-		ABZR87_RS08815	0.43	-0.4
1,871,643	+		ABZR87_RS08815	0.52	+0.3
1,871,644	-		ABZR87_RS08815	0.52	+1.0
1,871,644	-		ABZR87_RS08815	0.52	+0.8
1,871,644	-		ABZR87_RS08815	0.52	+0.1
1,871,644	-		ABZR87_RS08815	0.52	+1.8
1,871,644	-		ABZR87_RS08815	0.52	-0.9
1,871,644	-		ABZR87_RS08815	0.52	-0.3
1,871,644	-		ABZR87_RS08815	0.52	+0.2
1,871,681	+		ABZR87_RS08815	0.58	+0.6
1,871,681	+		ABZR87_RS08815	0.58	+0.3
1,871,681	+		ABZR87_RS08815	0.58	-0.2
1,871,681	+		ABZR87_RS08815	0.58	+0.5
1,871,682	-		ABZR87_RS08815	0.58	-0.5
1,871,682	-		ABZR87_RS08815	0.58	-0.6
1,871,682	-		ABZR87_RS08815	0.58	-0.7
1,871,682	-		ABZR87_RS08815	0.58	+0.6
1,871,750	-		ABZR87_RS08815	0.68	-1.1
1,871,804	-		ABZR87_RS08815	0.76	+1.6
1,871,854	+		ABZR87_RS08815	0.84	-0.8
1,871,855	-		ABZR87_RS08815	0.84	+0.5
1,871,855	-		ABZR87_RS08815	0.84	+0.1
1,871,913	+				-0.3
1,871,914	-				+0.5
1,871,914	-				-0.1
1,871,914	-				-0.0
1,871,916	+				-0.3
1,871,917	-				+0.1
1,871,917	-				+0.3
1,871,917	-				-0.4
1,871,926	+				+0.7
1,871,927	-				+0.6
1,872,001	+				+0.3
1,872,001	+				-1.2
1,872,002	-				-0.3
1,872,059	+				-0.9
1,872,059	+				-0.9
1,872,059	+				+1.3
1,872,059	+				-0.4
1,872,059	+				-0.6
1,872,059	+				+0.5
1,872,059	+				-0.5
1,872,059	+				+0.2
1,872,059	+				+0.5
1,872,059	+				+0.4
1,872,060	-				-0.1
1,872,060	-				-0.5
1,872,060	-				-0.1
1,872,060	-				+0.2
1,872,060	-				-0.1
1,872,060	-				+0.1
1,872,085	+				+0.3
1,872,085	+				-0.8
1,872,086	-				-0.5
1,872,086	-				-0.5
1,872,086	-				-0.1
1,872,086	-				+0.3
1,872,092	+				-0.4
1,872,092	+				+0.1
1,872,093	-				-0.0
1,872,093	-				-0.2
1,872,120	-				-0.1
1,872,120	-				-0.5
1,872,148	+				+0.1
1,872,149	-				+0.1
1,872,149	-				+0.1
1,872,149	-				+0.2
1,872,156	-				-0.4
1,872,156	-				-0.5
1,872,238	+				+0.5
1,872,238	+				-0.8
1,872,238	+				-0.3
1,872,238	+				+0.4
1,872,238	+				+1.0
1,872,238	+				-0.1
1,872,239	-				-0.5
1,872,239	-				-0.4
1,872,239	-				-0.5
1,872,239	-				+1.5
1,872,292	-				-0.8
1,872,301	+				+0.4
1,872,301	+				-2.0
1,872,302	-				-0.2
1,872,302	-				+0.3
1,872,302	-				-0.3
1,872,302	-				+0.1
1,872,475	+		ABZR87_RS08820	0.32	-0.9
1,872,475	+		ABZR87_RS08820	0.32	-0.9
1,872,475	+		ABZR87_RS08820	0.32	-0.2
1,872,476	-		ABZR87_RS08820	0.33	+0.4
1,872,476	-		ABZR87_RS08820	0.33	-1.0
1,872,476	-		ABZR87_RS08820	0.33	-0.3
1,872,476	-		ABZR87_RS08820	0.33	+0.4
1,872,476	-		ABZR87_RS08820	0.33	+1.2
1,872,511	+		ABZR87_RS08820	0.39	-0.0
1,872,512	-		ABZR87_RS08820	0.40	-0.5
1,872,535	+		ABZR87_RS08820	0.44	+0.4
1,872,535	+		ABZR87_RS08820	0.44	-1.2
1,872,535	+		ABZR87_RS08820	0.44	-0.7
1,872,535	+		ABZR87_RS08820	0.44	-0.6
1,872,535	+		ABZR87_RS08820	0.44	-0.2
1,872,536	-		ABZR87_RS08820	0.44	+1.3
1,872,536	-		ABZR87_RS08820	0.44	-0.7
1,872,536	-		ABZR87_RS08820	0.44	+0.1
1,872,536	-		ABZR87_RS08820	0.44	+0.4
1,872,617	+		ABZR87_RS08820	0.60	-0.0
1,872,618	-		ABZR87_RS08820	0.60	-0.1
1,872,618	-		ABZR87_RS08820	0.60	+1.2
1,872,646	+		ABZR87_RS08820	0.66	+0.2
1,872,646	+		ABZR87_RS08820	0.66	-0.0
1,872,646	+		ABZR87_RS08820	0.66	+0.5
1,872,647	-		ABZR87_RS08820	0.66	-0.4
1,872,673	+		ABZR87_RS08820	0.71	+0.3
1,872,674	-		ABZR87_RS08820	0.71	+0.0
1,872,815	+				+1.6
1,872,816	-				-0.2
1,872,816	-				+0.4
1,872,859	+				-0.3
1,872,860	-				+0.1
1,872,860	-				-0.2
1,872,860	-				-1.1
1,872,877	+				-0.4
1,872,877	+				-0.7
1,872,878	-				+0.5
1,872,878	-				-0.3
1,872,886	-				+0.3
1,872,886	-				-1.4
1,872,889	-				+0.0
1,872,897	+				+0.6