Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08730

Experiment: soil sample 6; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil sample 6; outgrowth in LB
1,853,623	+		ABZR87_RS08725	0.15	-2.3
1,853,623	+		ABZR87_RS08725	0.15	-2.3
1,853,623	+		ABZR87_RS08725	0.15	-1.7
1,853,623	+		ABZR87_RS08725	0.15	-4.4
1,853,623	+		ABZR87_RS08725	0.15	-1.2
1,853,623	+		ABZR87_RS08725	0.15	-3.7
1,853,623	+		ABZR87_RS08725	0.15	-1.3
1,853,623	+		ABZR87_RS08725	0.15	+1.0
1,853,623	+		ABZR87_RS08725	0.15	-1.0
1,853,623	+		ABZR87_RS08725	0.15	-1.2
1,853,624	-		ABZR87_RS08725	0.15	-1.3
1,853,624	-		ABZR87_RS08725	0.15	-1.2
1,853,624	-		ABZR87_RS08725	0.15	-2.6
1,853,624	-		ABZR87_RS08725	0.15	-1.2
1,853,624	-		ABZR87_RS08725	0.15	-2.3
1,853,624	-		ABZR87_RS08725	0.15	-4.0
1,853,705	+		ABZR87_RS08725	0.22	-1.0
1,853,705	+		ABZR87_RS08725	0.22	-2.0
1,853,706	-		ABZR87_RS08725	0.22	-3.0
1,853,706	-		ABZR87_RS08725	0.22	-0.8
1,853,706	-		ABZR87_RS08725	0.22	-1.1
1,853,716	+		ABZR87_RS08725	0.23	-2.4
1,853,716	+		ABZR87_RS08725	0.23	-1.9
1,853,717	-		ABZR87_RS08725	0.23	-1.8
1,853,801	+		ABZR87_RS08725	0.31	-3.5
1,853,802	-		ABZR87_RS08725	0.31	-0.7
1,853,945	+		ABZR87_RS08725	0.43	-1.3
1,853,946	-		ABZR87_RS08725	0.43	-0.8
1,853,946	-		ABZR87_RS08725	0.43	-1.7
1,853,946	-		ABZR87_RS08725	0.43	-0.6
1,853,946	-		ABZR87_RS08725	0.43	-0.4
1,853,946	-		ABZR87_RS08725	0.43	-1.2
1,853,946	-		ABZR87_RS08725	0.43	-1.4
1,853,946	-		ABZR87_RS08725	0.43	-3.6
1,853,993	+		ABZR87_RS08725	0.47	-3.2
1,853,993	+		ABZR87_RS08725	0.47	-1.4
1,853,993	+		ABZR87_RS08725	0.47	-0.5
1,853,993	+		ABZR87_RS08725	0.47	-2.7
1,853,994	-		ABZR87_RS08725	0.47	-2.0
1,853,994	-		ABZR87_RS08725	0.47	-0.9
1,853,994	-		ABZR87_RS08725	0.47	-1.9
1,853,994	-		ABZR87_RS08725	0.47	-2.6
1,854,060	-		ABZR87_RS08725	0.53	-0.8
1,854,060	-		ABZR87_RS08725	0.53	-2.2
1,854,060	-		ABZR87_RS08725	0.53	-1.3
1,854,060	-		ABZR87_RS08725	0.53	-1.1
1,854,060	-		ABZR87_RS08725	0.53	-2.0
1,854,060	-		ABZR87_RS08725	0.53	-2.8
1,854,060	-		ABZR87_RS08725	0.53	-1.7
1,854,090	+		ABZR87_RS08725	0.55	-0.6
1,854,090	+		ABZR87_RS08725	0.55	-1.5
1,854,090	+		ABZR87_RS08725	0.55	-1.7
1,854,090	+		ABZR87_RS08725	0.55	-2.3
1,854,090	+		ABZR87_RS08725	0.55	-2.5
1,854,091	-		ABZR87_RS08725	0.55	-1.6
1,854,091	-		ABZR87_RS08725	0.55	-1.7
1,854,091	-		ABZR87_RS08725	0.55	-0.5
1,854,091	-		ABZR87_RS08725	0.55	-0.3
1,854,091	-		ABZR87_RS08725	0.55	-1.6
1,854,091	-		ABZR87_RS08725	0.55	-0.3
1,854,091	-		ABZR87_RS08725	0.55	-1.9
1,854,091	-		ABZR87_RS08725	0.55	-2.3
1,854,091	-		ABZR87_RS08725	0.55	-2.6
1,854,091	-		ABZR87_RS08725	0.55	-2.1
1,854,091	-		ABZR87_RS08725	0.55	-2.4
1,854,102	+		ABZR87_RS08725	0.56	-2.4
1,854,102	+		ABZR87_RS08725	0.56	-2.1
1,854,102	+		ABZR87_RS08725	0.56	-2.4
1,854,102	+		ABZR87_RS08725	0.56	-2.0
1,854,102	+		ABZR87_RS08725	0.56	-2.2
1,854,103	-		ABZR87_RS08725	0.56	-1.8
1,854,283	+		ABZR87_RS08725	0.72	-0.0
1,854,283	+		ABZR87_RS08725	0.72	-2.5
1,854,283	+		ABZR87_RS08725	0.72	-3.5
1,854,283	+		ABZR87_RS08725	0.72	-0.8
1,854,284	-		ABZR87_RS08725	0.72	-2.1
1,854,289	+		ABZR87_RS08725	0.72	-3.6
1,854,308	+		ABZR87_RS08725	0.74	-1.7
1,854,308	+		ABZR87_RS08725	0.74	-2.4
1,854,308	+		ABZR87_RS08725	0.74	-0.7
1,854,309	-		ABZR87_RS08725	0.74	-2.8
1,854,309	-		ABZR87_RS08725	0.74	-1.0
1,854,309	-		ABZR87_RS08725	0.74	-1.3
1,854,324	+		ABZR87_RS08725	0.75	-1.6
1,854,324	+		ABZR87_RS08725	0.75	-3.7
1,854,324	+		ABZR87_RS08725	0.75	-3.0
1,854,325	-		ABZR87_RS08725	0.75	-1.2
1,854,325	-		ABZR87_RS08725	0.75	+0.5
1,854,325	-		ABZR87_RS08725	0.75	-4.3
1,854,325	-		ABZR87_RS08725	0.75	-0.7
1,854,325	-		ABZR87_RS08725	0.75	-2.3
1,854,333	+		ABZR87_RS08725	0.76	-1.5
1,854,334	-		ABZR87_RS08725	0.76	-1.0
1,854,334	-		ABZR87_RS08725	0.76	-0.6
1,854,334	-		ABZR87_RS08725	0.76	-2.8
1,854,339	+		ABZR87_RS08725	0.76	-1.3
1,854,339	+		ABZR87_RS08725	0.76	-2.7
1,854,339	+		ABZR87_RS08725	0.76	-0.9
1,854,340	-		ABZR87_RS08725	0.76	-2.5
1,854,340	-		ABZR87_RS08725	0.76	-0.7
1,854,340	-		ABZR87_RS08725	0.76	-1.2
1,854,358	+		ABZR87_RS08725	0.78	-1.4
1,854,358	+		ABZR87_RS08725	0.78	-0.9
1,854,358	+		ABZR87_RS08725	0.78	-1.5
1,854,359	-		ABZR87_RS08725	0.78	-3.2
1,854,359	-		ABZR87_RS08725	0.78	-2.5
1,854,420	+		ABZR87_RS08725	0.83	-0.1
1,854,420	+		ABZR87_RS08725	0.83	-1.2
1,854,420	+		ABZR87_RS08725	0.83	-2.0
1,854,420	+		ABZR87_RS08725	0.83	-2.3
1,854,420	+		ABZR87_RS08725	0.83	-2.3
1,854,420	+		ABZR87_RS08725	0.83	+0.8
1,854,421	-		ABZR87_RS08725	0.83	-2.4
1,854,421	-		ABZR87_RS08725	0.83	-2.5
1,854,421	-		ABZR87_RS08725	0.83	-2.5
1,854,421	-		ABZR87_RS08725	0.83	-2.1
1,854,444	+		ABZR87_RS08725	0.85	-1.6
1,854,444	+		ABZR87_RS08725	0.85	-1.2
1,854,444	+		ABZR87_RS08725	0.85	-1.8
1,854,444	+		ABZR87_RS08725	0.85	-2.7
1,854,444	+		ABZR87_RS08725	0.85	-1.3
1,854,444	+		ABZR87_RS08725	0.85	-2.8
1,854,444	+		ABZR87_RS08725	0.85	-0.7
1,854,444	+		ABZR87_RS08725	0.85	-3.1
1,854,445	-		ABZR87_RS08725	0.85	-0.7
1,854,445	-		ABZR87_RS08725	0.85	-2.3
1,854,445	-		ABZR87_RS08725	0.85	-1.0
1,854,445	-		ABZR87_RS08725	0.85	-2.4
1,854,493	+		ABZR87_RS08725	0.89	+0.1
1,854,569	+				-1.5
1,854,569	+				-3.1
1,854,569	+				-1.1
1,854,569	+				-0.2
1,854,569	+				-3.1
1,854,569	+				-1.4
1,854,570	-				-1.0
1,854,570	-				-1.6
1,854,570	-				-1.7
1,854,570	-				-1.8
1,854,570	-				-0.3
1,854,595	+				-2.8
1,854,595	+				-2.2
1,854,596	-				-2.0
1,854,596	-				-0.8
1,854,596	-				-1.0
1,854,596	-				-1.1
1,854,596	-				-2.2
1,854,596	-				-1.8
1,854,625	+				-1.0
1,854,625	+				-1.3
1,854,625	+				-1.0
1,854,625	+				-0.8
1,854,625	+				-1.7
1,854,625	+				-1.6
1,854,625	+				-1.4
1,854,626	-				-3.1
1,854,626	-				-0.4
1,854,626	-				-1.7
1,854,626	-				-2.7
1,854,626	-				-2.5
1,854,626	-				-2.4
1,854,669	+				-0.1
1,854,670	-				-4.0
1,854,670	-				-2.8
1,854,670	-				-0.6
1,854,670	-				-0.5
1,854,690	+				-2.7
1,854,690	+				-3.6
1,854,690	+				-1.9
1,854,691	-				-2.4
1,854,691	-				-0.9
1,854,722	+				-1.5
1,854,722	+				-2.0
1,854,722	+				-2.2
1,854,722	+				-1.8
1,854,723	-				-1.7
1,854,723	-				-1.2
1,854,723	-				-0.1
1,854,747	+				-1.5
1,854,747	+				-1.4
1,854,748	-				-2.1
1,854,810	+		ABZR87_RS08730	0.10	-1.7
1,854,811	-		ABZR87_RS08730	0.10	-1.9
1,854,811	-		ABZR87_RS08730	0.10	-1.6
1,854,822	+		ABZR87_RS08730	0.11	-2.0
1,854,822	+		ABZR87_RS08730	0.11	-1.7
1,854,822	+		ABZR87_RS08730	0.11	-1.1
1,854,823	-		ABZR87_RS08730	0.11	-2.0
1,854,823	-		ABZR87_RS08730	0.11	-0.8
1,854,825	-		ABZR87_RS08730	0.11	-2.1
1,854,842	+		ABZR87_RS08730	0.12	-0.4
1,854,842	+		ABZR87_RS08730	0.12	-0.9
1,854,843	-		ABZR87_RS08730	0.12	-1.0
1,854,850	+		ABZR87_RS08730	0.12	-1.7
1,854,850	+		ABZR87_RS08730	0.12	-0.4
1,854,851	-		ABZR87_RS08730	0.12	-0.1
1,854,851	-		ABZR87_RS08730	0.12	-1.7
1,854,851	-		ABZR87_RS08730	0.12	-2.7
1,854,890	+		ABZR87_RS08730	0.14	-2.3
1,854,890	+		ABZR87_RS08730	0.14	-1.5
1,854,890	+		ABZR87_RS08730	0.14	-1.4
1,854,891	-		ABZR87_RS08730	0.14	-0.7
1,854,891	-		ABZR87_RS08730	0.14	-0.7
1,854,891	-		ABZR87_RS08730	0.14	+0.3
1,854,891	-		ABZR87_RS08730	0.14	-1.4
1,854,891	-		ABZR87_RS08730	0.14	-2.7
1,854,891	-		ABZR87_RS08730	0.14	-0.6
1,854,891	-		ABZR87_RS08730	0.14	-1.1
1,854,897	+		ABZR87_RS08730	0.15	-1.5
1,854,897	+		ABZR87_RS08730	0.15	-2.2
1,854,897	+		ABZR87_RS08730	0.15	-2.0
1,854,897	+		ABZR87_RS08730	0.15	-1.4
1,854,898	-		ABZR87_RS08730	0.15	-1.8
1,854,898	-		ABZR87_RS08730	0.15	-0.4
1,854,898	-		ABZR87_RS08730	0.15	-1.2
1,854,898	-		ABZR87_RS08730	0.15	-2.0
1,854,913	+		ABZR87_RS08730	0.15	-1.3
1,854,913	+		ABZR87_RS08730	0.15	-3.0
1,854,913	+		ABZR87_RS08730	0.15	-0.8
1,854,914	-		ABZR87_RS08730	0.15	-1.1
1,854,914	-		ABZR87_RS08730	0.15	-2.2
1,854,960	+		ABZR87_RS08730	0.18	-1.7
1,854,960	+		ABZR87_RS08730	0.18	-1.4
1,854,960	+		ABZR87_RS08730	0.18	-1.5
1,854,960	+		ABZR87_RS08730	0.18	-2.6
1,854,960	+		ABZR87_RS08730	0.18	-1.0
1,854,960	+		ABZR87_RS08730	0.18	-1.2
1,854,960	+		ABZR87_RS08730	0.18	-2.0
1,854,961	-		ABZR87_RS08730	0.18	-1.7
1,854,961	-		ABZR87_RS08730	0.18	-2.8
1,854,961	-		ABZR87_RS08730	0.18	-1.9
1,854,961	-		ABZR87_RS08730	0.18	-2.4
1,854,961	-		ABZR87_RS08730	0.18	-1.7
1,854,961	-		ABZR87_RS08730	0.18	-2.7
1,854,961	-		ABZR87_RS08730	0.18	-1.2
1,854,961	-		ABZR87_RS08730	0.18	-2.7
1,854,961	-		ABZR87_RS08730	0.18	-1.5
1,854,961	-		ABZR87_RS08730	0.18	-1.3
1,854,961	-		ABZR87_RS08730	0.18	-1.9
1,854,961	-		ABZR87_RS08730	0.18	-3.3
1,854,961	-		ABZR87_RS08730	0.18	-1.3
1,854,961	-		ABZR87_RS08730	0.18	-2.6
1,854,967	+		ABZR87_RS08730	0.18	-2.9
1,854,967	+		ABZR87_RS08730	0.18	-2.3
1,854,967	+		ABZR87_RS08730	0.18	-0.9
1,854,967	+		ABZR87_RS08730	0.18	-1.1
1,854,967	+		ABZR87_RS08730	0.18	-4.2
1,854,967	+		ABZR87_RS08730	0.18	-2.7
1,854,968	-		ABZR87_RS08730	0.18	-1.2
1,854,968	-		ABZR87_RS08730	0.18	-1.8
1,854,968	-		ABZR87_RS08730	0.18	-1.9
1,854,968	-		ABZR87_RS08730	0.18	-4.0
1,854,984	+		ABZR87_RS08730	0.19	-1.8
1,854,984	+		ABZR87_RS08730	0.19	-0.4
1,854,984	+		ABZR87_RS08730	0.19	-1.6
1,854,984	+		ABZR87_RS08730	0.19	-2.0
1,854,985	-		ABZR87_RS08730	0.19	-2.1
1,854,985	-		ABZR87_RS08730	0.19	-1.3
1,854,985	-		ABZR87_RS08730	0.19	-3.1
1,854,985	-		ABZR87_RS08730	0.19	-0.6
1,854,994	+		ABZR87_RS08730	0.20	-3.8
1,854,994	+		ABZR87_RS08730	0.20	-1.9
1,854,995	-		ABZR87_RS08730	0.20	-2.8
1,854,995	-		ABZR87_RS08730	0.20	-2.5
1,854,995	-		ABZR87_RS08730	0.20	-2.7
1,854,995	-		ABZR87_RS08730	0.20	-3.7
1,855,073	+		ABZR87_RS08730	0.24	-1.2
1,855,073	+		ABZR87_RS08730	0.24	-1.2
1,855,073	+		ABZR87_RS08730	0.24	-1.2
1,855,073	+		ABZR87_RS08730	0.24	-0.8
1,855,074	-		ABZR87_RS08730	0.24	-1.2
1,855,074	-		ABZR87_RS08730	0.24	-2.1
1,855,119	+		ABZR87_RS08730	0.26	-1.2
1,855,119	+		ABZR87_RS08730	0.26	-0.0
1,855,120	-		ABZR87_RS08730	0.26	-0.4
1,855,120	-		ABZR87_RS08730	0.26	-0.3
1,855,146	-		ABZR87_RS08730	0.27	-1.3
1,855,147	+		ABZR87_RS08730	0.27	-1.7
1,855,183	+		ABZR87_RS08730	0.29	-1.2
1,855,240	+		ABZR87_RS08730	0.32	-1.8
1,855,240	+		ABZR87_RS08730	0.32	-1.7
1,855,240	+		ABZR87_RS08730	0.32	-1.1
1,855,241	-		ABZR87_RS08730	0.32	-0.6
1,855,241	-		ABZR87_RS08730	0.32	-2.7
1,855,241	-		ABZR87_RS08730	0.32	-1.0
1,855,241	-		ABZR87_RS08730	0.32	-0.9
1,855,250	-		ABZR87_RS08730	0.33	-0.9
1,855,250	-		ABZR87_RS08730	0.33	-2.3
1,855,250	-		ABZR87_RS08730	0.33	-2.8
1,855,250	-		ABZR87_RS08730	0.33	-2.6
1,855,288	+		ABZR87_RS08730	0.35	-4.0
1,855,288	+		ABZR87_RS08730	0.35	-0.2
1,855,288	+		ABZR87_RS08730	0.35	-1.7
1,855,288	+		ABZR87_RS08730	0.35	-2.3
1,855,288	+		ABZR87_RS08730	0.35	+0.8
1,855,288	+		ABZR87_RS08730	0.35	-2.8
1,855,289	-		ABZR87_RS08730	0.35	-1.3
1,855,289	-		ABZR87_RS08730	0.35	-1.4
1,855,289	-		ABZR87_RS08730	0.35	-1.2
1,855,289	-		ABZR87_RS08730	0.35	-1.4
1,855,317	+		ABZR87_RS08730	0.36	-2.2
1,855,317	+		ABZR87_RS08730	0.36	+2.3
1,855,333	+		ABZR87_RS08730	0.37	-0.5
1,855,333	+		ABZR87_RS08730	0.37	-1.5
1,855,333	+		ABZR87_RS08730	0.37	-1.2
1,855,333	+		ABZR87_RS08730	0.37	-1.8
1,855,333	+		ABZR87_RS08730	0.37	-2.1
1,855,334	-		ABZR87_RS08730	0.37	-1.0
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