Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05295

Experiment: soil sample 6; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil sample 6; outgrowth in LB
1,112,934	+				-0.5
1,112,935	+				-0.2
1,112,935	+				-1.2
1,112,935	+				+1.1
1,112,935	+				+0.3
1,112,935	+				-0.6
1,112,935	+				-0.8
1,112,935	+				+1.5
1,112,935	+				+0.4
1,112,935	+				+0.0
1,112,935	+				+0.3
1,112,936	-				-1.2
1,112,936	-				+0.2
1,112,936	-				+0.9
1,112,936	-				+0.1
1,112,936	-				-0.1
1,112,936	-				+0.0
1,113,022	+		ABZR87_RS05290	0.18	+0.4
1,113,022	+		ABZR87_RS05290	0.18	-0.3
1,113,022	+		ABZR87_RS05290	0.18	-0.1
1,113,022	+		ABZR87_RS05290	0.18	+0.1
1,113,022	+		ABZR87_RS05290	0.18	-0.8
1,113,022	+		ABZR87_RS05290	0.18	-0.3
1,113,023	-		ABZR87_RS05290	0.18	+0.3
1,113,023	-		ABZR87_RS05290	0.18	+0.1
1,113,023	-		ABZR87_RS05290	0.18	-0.1
1,113,023	-		ABZR87_RS05290	0.18	-1.8
1,113,023	-		ABZR87_RS05290	0.18	-0.5
1,113,023	-		ABZR87_RS05290	0.18	+0.6
1,113,113	+		ABZR87_RS05290	0.29	+0.5
1,113,113	+		ABZR87_RS05290	0.29	-0.5
1,113,114	-		ABZR87_RS05290	0.29	-0.2
1,113,517	+		ABZR87_RS05290	0.74	-0.8
1,113,517	+		ABZR87_RS05290	0.74	+0.2
1,113,517	+		ABZR87_RS05290	0.74	+0.8
1,113,517	+		ABZR87_RS05290	0.74	+0.9
1,113,517	+		ABZR87_RS05290	0.74	+1.1
1,113,517	+		ABZR87_RS05290	0.74	-0.8
1,113,518	-		ABZR87_RS05290	0.74	-1.1
1,113,518	-		ABZR87_RS05290	0.74	-0.5
1,113,518	-		ABZR87_RS05290	0.74	-0.0
1,113,518	-		ABZR87_RS05290	0.74	-0.1
1,113,518	-		ABZR87_RS05290	0.74	+0.0
1,113,529	+		ABZR87_RS05290	0.75	+0.1
1,113,529	+		ABZR87_RS05290	0.75	+0.8
1,113,529	+		ABZR87_RS05290	0.75	-0.7
1,113,529	+		ABZR87_RS05290	0.75	+0.1
1,113,530	-		ABZR87_RS05290	0.75	-0.2
1,113,530	-		ABZR87_RS05290	0.75	+0.4
1,113,530	-		ABZR87_RS05290	0.75	-0.9
1,113,530	-		ABZR87_RS05290	0.75	-0.6
1,113,733	+				-0.1
1,113,733	+				-0.6
1,113,733	+				+0.8
1,113,733	+				-1.6
1,113,733	+				+0.5
1,113,733	+				-0.6
1,113,733	+				+0.0
1,113,734	-				+0.9
1,113,734	-				-0.7
1,113,734	-				+0.7
1,113,734	-				-0.6
1,113,769	-				-1.2
1,113,769	-				-2.1
1,113,769	-				+0.9
1,113,769	-				+0.6
1,113,802	-				+0.1
1,113,802	-				-0.6
1,113,852	+				-0.1
1,113,852	+				+0.8
1,113,853	-				-0.1
1,113,853	-				-0.6
1,113,853	-				+1.4
1,114,019	+		ABZR87_RS05295	0.12	+0.0
1,114,019	+		ABZR87_RS05295	0.12	+0.2
1,114,019	+		ABZR87_RS05295	0.12	+0.1
1,114,019	+		ABZR87_RS05295	0.12	+0.7
1,114,019	+		ABZR87_RS05295	0.12	+1.0
1,114,019	+		ABZR87_RS05295	0.12	+1.3
1,114,020	-		ABZR87_RS05295	0.12	-0.2
1,114,020	-		ABZR87_RS05295	0.12	-1.0
1,114,020	-		ABZR87_RS05295	0.12	-0.7
1,114,020	-		ABZR87_RS05295	0.12	-0.0
1,114,020	-		ABZR87_RS05295	0.12	+0.1
1,114,020	-		ABZR87_RS05295	0.12	-1.9
1,114,020	-		ABZR87_RS05295	0.12	-0.9
1,114,281	+		ABZR87_RS05295	0.30	+0.2
1,114,281	+		ABZR87_RS05295	0.30	-0.6
1,114,281	+		ABZR87_RS05295	0.30	+0.4
1,114,281	+		ABZR87_RS05295	0.30	-1.9
1,114,281	+		ABZR87_RS05295	0.30	-0.7
1,114,281	+		ABZR87_RS05295	0.30	-0.8
1,114,282	-		ABZR87_RS05295	0.30	-0.7
1,114,282	-		ABZR87_RS05295	0.30	-0.8
1,114,369	+		ABZR87_RS05295	0.36	-1.6
1,114,527	+		ABZR87_RS05295	0.47	+0.6
1,114,527	+		ABZR87_RS05295	0.47	+0.3
1,114,528	-		ABZR87_RS05295	0.47	+0.3
1,114,528	-		ABZR87_RS05295	0.47	-0.4
1,115,394	+				-0.3
1,115,469	+				+0.5
1,115,469	+				+0.1
1,115,469	+				+0.4
1,115,469	+				+0.3
1,115,470	-				+0.6
1,115,470	-				+0.6
1,115,470	-				-0.0
1,115,470	-				-1.2
1,115,470	-				-0.1
1,115,470	-				-0.1
1,115,470	-				-0.4
1,115,470	-				-0.1
1,115,499	+		ABZR87_RS05300	0.12	+0.7
1,115,499	+		ABZR87_RS05300	0.12	-0.1
1,115,499	+		ABZR87_RS05300	0.12	-0.5
1,115,499	+		ABZR87_RS05300	0.12	+0.0
1,115,499	+		ABZR87_RS05300	0.12	-0.9
1,115,500	-		ABZR87_RS05300	0.12	-0.0
1,115,537	+		ABZR87_RS05300	0.16	+0.4
1,115,537	+		ABZR87_RS05300	0.16	-0.3
1,115,537	+		ABZR87_RS05300	0.16	-0.1
1,115,537	+		ABZR87_RS05300	0.16	+0.8
1,115,537	+		ABZR87_RS05300	0.16	+0.6
1,115,538	-		ABZR87_RS05300	0.16	+0.1
1,115,538	-		ABZR87_RS05300	0.16	+0.2
1,115,538	-		ABZR87_RS05300	0.16	+0.3
1,115,538	-		ABZR87_RS05300	0.16	-0.4
1,115,538	-		ABZR87_RS05300	0.16	-1.7
1,115,538	-		ABZR87_RS05300	0.16	+0.3
1,115,541	+		ABZR87_RS05300	0.17	-1.1
1,115,541	+		ABZR87_RS05300	0.17	-0.2
1,115,541	+		ABZR87_RS05300	0.17	-1.2
1,115,541	+		ABZR87_RS05300	0.17	+0.3
1,115,541	+		ABZR87_RS05300	0.17	-0.6
1,115,542	-		ABZR87_RS05300	0.17	-0.4
1,115,542	-		ABZR87_RS05300	0.17	+0.3
1,115,542	-		ABZR87_RS05300	0.17	-0.3
1,115,542	-		ABZR87_RS05300	0.17	+0.5
1,115,542	-		ABZR87_RS05300	0.17	+0.5
1,115,589	+		ABZR87_RS05300	0.22	-0.6
1,115,590	-		ABZR87_RS05300	0.22	+1.0
1,115,590	-		ABZR87_RS05300	0.22	+0.8
1,115,590	-		ABZR87_RS05300	0.22	+0.1
1,115,590	-		ABZR87_RS05300	0.22	+0.3
1,115,871	+		ABZR87_RS05300	0.53	-1.4
1,115,871	+		ABZR87_RS05300	0.53	+0.5
1,115,871	+		ABZR87_RS05300	0.53	+1.3
1,115,871	+		ABZR87_RS05300	0.53	-0.3
1,115,871	+		ABZR87_RS05300	0.53	-1.9
1,115,871	+		ABZR87_RS05300	0.53	-0.4
1,115,871	+		ABZR87_RS05300	0.53	+0.8
1,115,872	-		ABZR87_RS05300	0.54	-0.1
1,115,872	-		ABZR87_RS05300	0.54	-0.9
1,115,872	-		ABZR87_RS05300	0.54	-0.1
1,115,872	-		ABZR87_RS05300	0.54	-0.3
1,115,872	-		ABZR87_RS05300	0.54	-1.2
1,115,872	-		ABZR87_RS05300	0.54	+0.6
1,115,872	-		ABZR87_RS05300	0.54	+0.7
1,115,872	-		ABZR87_RS05300	0.54	+0.2
1,115,872	-		ABZR87_RS05300	0.54	+0.1
1,115,923	+		ABZR87_RS05300	0.59	+0.2
1,115,924	-		ABZR87_RS05300	0.59	-0.5
1,115,924	-		ABZR87_RS05300	0.59	+0.4
1,116,009	+		ABZR87_RS05300	0.69	-0.2
1,116,010	-		ABZR87_RS05300	0.69	-1.0
1,116,010	-		ABZR87_RS05300	0.69	-0.9
1,116,010	-		ABZR87_RS05300	0.69	+0.5
1,116,018	+		ABZR87_RS05300	0.70	-0.5
1,116,018	+		ABZR87_RS05300	0.70	+0.2
1,116,018	+		ABZR87_RS05300	0.70	+0.5
1,116,019	-		ABZR87_RS05300	0.70	-0.1
1,116,019	-		ABZR87_RS05300	0.70	-0.1
1,116,019	-		ABZR87_RS05300	0.70	+0.4
1,116,019	-		ABZR87_RS05300	0.70	+0.5
1,116,096	+		ABZR87_RS05300	0.79	-0.2
1,116,096	+		ABZR87_RS05300	0.79	+0.0
1,116,097	-		ABZR87_RS05300	0.79	+0.2
1,116,097	-		ABZR87_RS05300	0.79	+0.2
1,116,099	+		ABZR87_RS05300	0.79	+0.5
1,116,099	+		ABZR87_RS05300	0.79	+0.2
1,116,099	+		ABZR87_RS05300	0.79	+0.5
1,116,099	+		ABZR87_RS05300	0.79	+0.5
1,116,100	-		ABZR87_RS05300	0.79	-0.4
1,116,100	-		ABZR87_RS05300	0.79	-0.2
1,116,100	-		ABZR87_RS05300	0.79	+0.5
1,116,100	-		ABZR87_RS05300	0.79	+0.1