Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5598
Experiment: methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.008 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 20,282 | - | Pf1N1B4_5597 | 0.27 | -0.3 | |
| 20,451 | + | +0.5 | |||
| 20,471 | - | Pf1N1B4_5597 | 0.43 | +1.1 | |
| 20,648 | - | Pf1N1B4_5597 | 0.59 | -0.5 | |
| 20,648 | - | Pf1N1B4_5597 | 0.59 | +1.4 | |
| 20,746 | + | Pf1N1B4_5597 | 0.67 | +1.1 | |
| 20,747 | - | Pf1N1B4_5597 | 0.67 | +0.3 | |
| 21,094 | - | -1.2 | |||
| 21,210 | + | +0.1 | |||
| 21,211 | - | +1.5 | |||
| 21,211 | - | -0.0 | |||
| 21,211 | - | -0.9 | |||
| 21,211 | - | -1.5 | |||
| 21,211 | - | +0.4 | |||
| 21,316 | - | Pf1N1B4_5598 | 0.19 | -0.2 | |
| 21,409 | - | Pf1N1B4_5598 | 0.66 | -1.1 | |
| 21,409 | - | Pf1N1B4_5598 | 0.66 | -2.0 | |
| 21,471 | + | -0.5 | |||
| 21,471 | + | +0.5 | |||
| 21,472 | - | +0.3 | |||
| 21,472 | - | +0.2 | |||
| 21,472 | - | -1.8 | |||
| 21,621 | + | +0.3 | |||
| 21,934 | - | +0.2 | |||
| 22,063 | + | Pf1N1B4_5599 | 0.46 | +0.1 | |
| 22,064 | - | Pf1N1B4_5599 | 0.46 | +0.1 | |
| 22,351 | + | -0.7 | |||
| 22,359 | - | +0.5 | |||
| 22,377 | + | -1.8 |
Or see this region's nucleotide sequence