Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3526

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
3,930,949	+		Pf1N1B4_3524	0.88	+1.3
3,930,949	+		Pf1N1B4_3524	0.88	-0.4
3,930,949	+		Pf1N1B4_3524	0.88	+0.5
3,931,299	-		Pf1N1B4_3525	0.30	+1.7
3,931,431	+		Pf1N1B4_3525	0.46	-1.1
3,931,516	+				+0.3
3,931,516	+		Pf1N1B4_3525	0.56	+0.5
3,931,516	+		Pf1N1B4_3525	0.56	-0.1
3,931,629	+		Pf1N1B4_3525	0.69	-0.4
3,931,629	+		Pf1N1B4_3525	0.69	+1.4
3,931,630	-				-0.1
3,931,948	+				+0.7
3,931,948	+				+0.9
3,931,948	+				+1.1
3,931,949	-				-1.4
3,931,949	-				+0.6
3,931,956	+				-0.6
3,931,956	+				+0.9
3,932,164	-		Pf1N1B4_3526	0.33	-1.9
3,932,352	+		Pf1N1B4_3526	0.62	+0.5
3,932,352	+		Pf1N1B4_3526	0.62	-0.4
3,932,352	+		Pf1N1B4_3526	0.62	-2.4
3,932,352	+		Pf1N1B4_3526	0.62	-0.7
3,932,352	+		Pf1N1B4_3526	0.62	-2.8
3,932,352	+		Pf1N1B4_3526	0.62	-0.7
3,932,352	+		Pf1N1B4_3526	0.62	-2.7
3,932,403	+		Pf1N1B4_3526	0.70	+0.3
3,932,427	+		Pf1N1B4_3526	0.73	+1.9
3,932,608	-				+0.9
3,932,672	-				-0.7
3,932,849	+				+0.9
3,932,850	-		Pf1N1B4_3527	0.29	+0.3
3,932,850	-		Pf1N1B4_3527	0.29	-0.3
3,932,850	-		Pf1N1B4_3527	0.29	-0.1
3,932,932	-		Pf1N1B4_3527	0.40	-0.7
3,932,932	-		Pf1N1B4_3527	0.40	-1.7
3,933,005	+		Pf1N1B4_3527	0.49	+0.8
3,933,030	-		Pf1N1B4_3527	0.52	-1.9
3,933,030	-		Pf1N1B4_3527	0.52	-0.8
3,933,034	-		Pf1N1B4_3527	0.52	+1.1
3,933,080	+		Pf1N1B4_3527	0.58	-1.4
3,933,081	-		Pf1N1B4_3527	0.58	-0.7
3,933,110	+		Pf1N1B4_3527	0.62	+0.5
3,933,351	+				+1.2
3,933,454	-				+0.7
3,933,484	+				-1.4
3,933,484	+				-0.8
3,933,484	+				-1.4
3,933,484	+				-1.7
3,933,484	+				+2.2
3,933,485	-				+1.5
3,933,485	-				+0.1