Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3306

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
3,693,370	-		Pf1N1B4_3304	0.79	-0.2
3,693,388	+		Pf1N1B4_3304	0.81	+0.6
3,693,389	-		Pf1N1B4_3304	0.81	-1.5
3,693,391	+		Pf1N1B4_3304	0.82	+0.7
3,693,392	-				+2.6
3,693,485	-				+1.0
3,693,497	+				+3.6
3,693,498	-				+0.5
3,693,498	-				+1.6
3,693,498	-				-2.3
3,693,550	+				+1.0
3,693,550	+				-0.4
3,693,550	+				+0.2
3,693,551	-				-0.1
3,693,704	+		Pf1N1B4_3305	0.21	-2.0
3,693,704	+		Pf1N1B4_3305	0.21	+2.0
3,694,141	+		Pf1N1B4_3305	0.75	+0.3
3,694,141	+		Pf1N1B4_3305	0.75	-1.3
3,694,142	-		Pf1N1B4_3305	0.75	+0.5
3,694,142	-		Pf1N1B4_3305	0.75	+0.6
3,694,142	-				+1.6
3,694,142	-		Pf1N1B4_3305	0.75	+1.0
3,694,173	+		Pf1N1B4_3305	0.79	+0.3
3,694,264	+		Pf1N1B4_3305	0.90	-0.3
3,694,351	+				-0.4
3,694,365	+				-0.8
3,694,365	+				+2.1
3,694,365	+				-0.4
3,694,365	+				+0.6
3,694,365	+				-2.3
3,694,365	+				-0.5
3,694,365	+				-0.8
3,694,366	-				+0.7
3,694,366	-				-0.2
3,694,395	+				-1.4
3,694,395	+				+0.6
3,694,395	+				+0.0
3,694,395	+				-0.3
3,694,395	+				+0.3
3,694,395	+				+0.7
3,694,395	+				+0.7
3,694,396	-				+0.5
3,694,396	-				+1.0
3,694,396	-				-0.3
3,694,396	-				-1.8
3,694,396	-				-1.8
3,694,700	+		Pf1N1B4_3306	0.31	+0.2
3,694,991	+		Pf1N1B4_3306	0.59	+1.8
3,694,991	+		Pf1N1B4_3306	0.59	-1.3
3,694,991	+		Pf1N1B4_3306	0.59	+0.0
3,694,991	+		Pf1N1B4_3306	0.59	-0.4
3,694,991	+		Pf1N1B4_3306	0.59	+1.0
3,694,991	+		Pf1N1B4_3306	0.59	-0.7
3,694,991	+		Pf1N1B4_3306	0.59	-1.3
3,694,992	-		Pf1N1B4_3306	0.59	+0.0
3,694,992	-		Pf1N1B4_3306	0.59	-1.0
3,694,992	-		Pf1N1B4_3306	0.59	+1.5
3,694,992	-		Pf1N1B4_3306	0.59	+0.0
3,694,992	-		Pf1N1B4_3306	0.59	-0.4
3,694,992	-		Pf1N1B4_3306	0.59	+1.6
3,694,995	+		Pf1N1B4_3306	0.59	-1.0
3,694,995	+		Pf1N1B4_3306	0.59	-1.0
3,694,995	+		Pf1N1B4_3306	0.59	-0.2
3,694,995	+		Pf1N1B4_3306	0.59	+2.0
3,694,996	-		Pf1N1B4_3306	0.59	+1.5
3,694,996	-		Pf1N1B4_3306	0.59	+0.2
3,695,199	+		Pf1N1B4_3306	0.78	-1.5
3,695,199	+		Pf1N1B4_3306	0.78	-1.1
3,695,199	+		Pf1N1B4_3306	0.78	-2.1
3,695,199	+		Pf1N1B4_3306	0.78	-2.1
3,695,200	-		Pf1N1B4_3306	0.78	-0.5
3,695,200	-		Pf1N1B4_3306	0.78	-0.4
3,695,220	+		Pf1N1B4_3306	0.80	-2.2
3,695,220	+		Pf1N1B4_3306	0.80	-1.3
3,695,220	+		Pf1N1B4_3306	0.80	+1.8
3,695,221	-		Pf1N1B4_3306	0.80	-0.4
3,695,299	-		Pf1N1B4_3306	0.88	+0.0
3,695,322	+		Pf1N1B4_3306	0.90	+0.8
3,695,322	+		Pf1N1B4_3306	0.90	+0.0
3,695,322	+		Pf1N1B4_3306	0.90	-2.7
3,695,322	+		Pf1N1B4_3306	0.90	+1.6
3,695,322	+		Pf1N1B4_3306	0.90	+0.5
3,695,323	-		Pf1N1B4_3306	0.90	-1.0
3,695,323	-		Pf1N1B4_3306	0.90	-0.3
3,695,323	-		Pf1N1B4_3306	0.90	-1.3
3,695,323	-				-1.0
3,695,323	-		Pf1N1B4_3306	0.90	-1.5
3,695,323	-		Pf1N1B4_3306	0.90	-1.0
3,695,327	-				+0.3
3,695,762	+				-1.0
3,695,762	+				+0.0
3,695,762	+				-0.2
3,695,763	-				+1.3
3,695,763	-				-0.8
3,695,763	-				+1.0
3,695,906	+				-1.0
3,695,906	+				+2.0
3,695,907	-				-0.4
3,695,907	-				+0.1
3,695,947	+				+0.0
3,695,947	+				-0.3
3,695,948	-				-0.5
3,695,950	+				-1.3
3,695,950	+				+2.0
3,695,950	+				+0.8
3,695,950	+				-0.1
3,695,950	+				-0.8
3,695,950	+				-1.1
3,695,951	-				+0.8
3,695,951	-				-0.5
3,695,951	-				+0.5
3,695,951	-				-1.0
3,695,951	-				+0.5
3,695,951	-				+1.0
3,695,951	-				+0.6
3,695,951	-				-1.0
3,695,951	-				-1.5
3,695,953	+				-0.5
3,695,953	+				-1.1
3,695,953	+				+0.2
3,695,953	+				+0.2
3,695,953	+				-1.0
3,695,953	+				+0.3
3,695,954	-				+0.4
3,695,970	+				+0.3
3,695,970	+				-1.4
3,695,970	+				-2.0
3,695,970	+				-1.8
3,695,970	+				+1.6
3,695,970	+				-0.7
3,695,971	-				+0.2
3,695,971	-				+1.0
3,695,974	+				+0.9
3,695,975	-				+2.4
3,695,986	+				+1.4
3,695,986	+				+0.2
3,695,987	-				-0.5
3,695,987	-				-0.7
3,695,989	+				-2.0
3,695,989	+				+1.5
3,695,989	+				+0.7
3,695,989	+				+1.3
3,695,989	+				-0.5
3,695,989	+				-2.7
3,695,990	-				+1.8
3,695,990	-				+1.6
3,695,990	-				+1.3
3,695,990	-				-1.3
3,695,990	-				+0.7
3,695,990	-				+3.2
3,695,990	-				+1.0
3,695,990	-				-0.5
3,695,990	-				-0.5
3,695,992	+				-1.0
3,695,992	+				-0.3
3,696,004	+				+0.1
3,696,004	+				-0.1
3,696,004	+				+0.4
3,696,004	+				-0.5
3,696,005	-				-0.5
3,696,005	-				+0.4
3,696,007	+				+2.6
3,696,007	+				+1.0
3,696,016	+				+0.6
3,696,016	+				-2.0
3,696,016	+				+0.0
3,696,016	+				-0.7
3,696,016	+				+0.0
3,696,017	-				+1.3
3,696,017	-				-1.5
3,696,017	-				+0.5
3,696,017	-				+0.0
3,696,019	+				+0.7
3,696,020	-				+0.5
3,696,020	-				-1.0
3,696,020	-				+1.0
3,696,020	-				-0.3
3,696,055	+				+1.5
3,696,058	+				-1.1
3,696,058	+				-0.5
3,696,058	+				+1.0
3,696,059	-				+0.5
3,696,059	-				+1.4
3,696,061	+				+0.0
3,696,061	+				-1.3
3,696,061	+				-0.5
3,696,061	+				-1.4
3,696,062	-				-1.0
3,696,062	-				-1.0
3,696,172	-				-1.4
3,696,202	-				-1.5
3,696,254	+				-0.5
3,696,254	+				+0.6
3,696,255	-				+0.3
3,696,377	-				+0.4
3,696,408	+				+0.5
3,696,429	+				-0.5
3,696,429	+				+0.5
3,696,429	+				-2.7
3,696,430	-				-0.3
3,696,430	-				+1.0
3,696,430	-				-0.0
3,696,430	-				-0.1