Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3141

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
3,523,593	+		Pf1N1B4_3139	0.83	+1.1
3,523,797	+				-0.9
3,523,797	+				-0.5
3,523,797	+				+2.5
3,523,797	+				+1.1
3,523,797	+				+1.1
3,523,797	+				-1.5
3,523,797	+				+0.3
3,523,797	+				-0.7
3,523,797	+				+1.0
3,523,797	+				+1.7
3,523,797	+				-0.7
3,523,797	+				+1.0
3,523,797	+				-0.2
3,523,797	+				-0.7
3,523,798	-				-0.4
3,523,799	+				-0.5
3,523,799	+				-0.5
3,523,800	-				+1.1
3,523,820	+				+0.9
3,523,820	+				+1.1
3,523,827	+				-0.3
3,523,842	+				+1.1
3,523,842	+				+0.4
3,523,842	+				+0.8
3,523,843	-				+2.1
3,523,867	+				-1.9
3,523,905	-				+0.7
3,524,005	+				+1.0
3,524,021	+				-0.9
3,524,021	+				-0.1
3,524,021	+				-1.9
3,524,021	+				-0.9
3,524,021	+				+2.3
3,524,021	+				+2.0
3,524,021	+				+0.5
3,524,021	+				+1.1
3,524,022	-				-0.9
3,524,022	-				-0.8
3,524,022	-				-0.3
3,524,022	-				-1.2
3,524,044	+				+0.1
3,524,044	+				-0.3
3,524,044	+				-1.5
3,524,044	+				+1.8
3,524,044	+				+1.1
3,524,044	+				+0.6
3,524,045	-				-0.9
3,524,185	+		Pf1N1B4_3140	0.24	-0.5
3,524,185	+		Pf1N1B4_3140	0.24	+1.5
3,524,185	+		Pf1N1B4_3140	0.24	-0.7
3,524,185	+		Pf1N1B4_3140	0.24	-0.5
3,524,185	+		Pf1N1B4_3140	0.24	+0.1
3,524,185	+		Pf1N1B4_3140	0.24	+1.4
3,524,185	+		Pf1N1B4_3140	0.24	+0.5
3,524,186	-		Pf1N1B4_3140	0.25	+1.6
3,524,186	-		Pf1N1B4_3140	0.25	-0.9
3,524,186	-		Pf1N1B4_3140	0.25	+1.4
3,524,186	-		Pf1N1B4_3140	0.25	-1.2
3,524,186	-		Pf1N1B4_3140	0.25	+0.4
3,524,186	-		Pf1N1B4_3140	0.25	+0.7
3,524,186	-		Pf1N1B4_3140	0.25	+0.3
3,524,186	-		Pf1N1B4_3140	0.25	-1.2
3,524,190	+		Pf1N1B4_3140	0.25	-0.5
3,524,190	+		Pf1N1B4_3140	0.25	-0.3
3,524,190	+		Pf1N1B4_3140	0.25	-0.9
3,524,190	+		Pf1N1B4_3140	0.25	+1.1
3,524,190	+		Pf1N1B4_3140	0.25	-0.9
3,524,191	-				+0.5
3,524,191	-		Pf1N1B4_3140	0.26	+0.8
3,524,191	-		Pf1N1B4_3140	0.26	+0.9
3,524,191	-		Pf1N1B4_3140	0.26	+0.5
3,524,194	+		Pf1N1B4_3140	0.26	-0.1
3,524,194	+		Pf1N1B4_3140	0.26	+0.1
3,524,194	+		Pf1N1B4_3140	0.26	-0.1
3,524,194	+		Pf1N1B4_3140	0.26	+1.5
3,524,194	+		Pf1N1B4_3140	0.26	-0.0
3,524,194	+		Pf1N1B4_3140	0.26	-0.7
3,524,194	+		Pf1N1B4_3140	0.26	+0.7
3,524,194	+		Pf1N1B4_3140	0.26	-1.0
3,524,194	+		Pf1N1B4_3140	0.26	-1.5
3,524,195	-		Pf1N1B4_3140	0.26	+0.5
3,524,195	-		Pf1N1B4_3140	0.26	+0.7
3,524,195	-		Pf1N1B4_3140	0.26	+1.5
3,524,195	-		Pf1N1B4_3140	0.26	-0.5
3,524,195	-		Pf1N1B4_3140	0.26	+0.5
3,524,195	-		Pf1N1B4_3140	0.26	-0.6
3,524,195	-		Pf1N1B4_3140	0.26	-1.2
3,524,195	-		Pf1N1B4_3140	0.26	+1.5
3,524,195	-		Pf1N1B4_3140	0.26	+0.1
3,524,218	-		Pf1N1B4_3140	0.31	-0.5
3,524,229	+		Pf1N1B4_3140	0.33	+0.1
3,524,229	+		Pf1N1B4_3140	0.33	+1.4
3,524,229	+				+1.5
3,524,230	-		Pf1N1B4_3140	0.33	-0.5
3,524,230	-		Pf1N1B4_3140	0.33	+0.5
3,524,295	+		Pf1N1B4_3140	0.45	+1.1
3,524,296	-		Pf1N1B4_3140	0.45	-1.2
3,524,566	+				+2.4
3,524,566	+				+0.8
3,524,567	-				-1.2
3,524,711	-		Pf1N1B4_3141	0.28	-0.6
3,524,818	+		Pf1N1B4_3141	0.48	-0.4
3,524,819	-		Pf1N1B4_3141	0.49	-1.2
3,525,005	-				-1.2
3,525,005	-				-1.2
3,525,062	+				-0.4
3,525,062	+				-0.4
3,525,062	+				-0.8
3,525,062	+				-0.1
3,525,063	-				+0.7
3,525,063	-				-0.9
3,525,063	-				+0.9
3,525,063	-				+1.5
3,525,130	-				+0.4
3,525,174	+				-0.7
3,525,174	+				-0.1
3,525,174	+				-1.2
3,525,316	+		Pf1N1B4_3142	0.30	+0.3
3,525,317	-		Pf1N1B4_3142	0.30	+1.9
3,525,325	+		Pf1N1B4_3142	0.32	+0.5
3,525,325	+		Pf1N1B4_3142	0.32	-0.1
3,525,325	+				+1.1
3,525,326	-		Pf1N1B4_3142	0.32	+0.7
3,525,326	-		Pf1N1B4_3142	0.32	-1.2
3,525,326	-		Pf1N1B4_3142	0.32	-0.4
3,525,473	+		Pf1N1B4_3142	0.61	+1.1
3,525,474	-		Pf1N1B4_3142	0.61	+0.2
3,525,565	+		Pf1N1B4_3142	0.80	-0.9
3,525,565	+		Pf1N1B4_3142	0.80	-1.2
3,525,565	+		Pf1N1B4_3142	0.80	-1.3
3,525,728	+				-0.7
3,525,729	-				-1.4
3,525,735	+				+0.7
3,525,735	+				-0.0
3,525,735	+				+1.1
3,525,735	+				-0.2
3,525,939	+		Pf1N1B4_3143	0.18	-0.5
3,525,939	+		Pf1N1B4_3143	0.18	-1.5