Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2508

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
2,844,244	+				+2.2
2,844,244	+				+0.7
2,844,245	-				-1.8
2,844,245	-				+0.6
2,844,299	+				+0.6
2,844,300	-				+0.4
2,844,322	+				+1.5
2,844,322	+				-1.6
2,844,322	+				+0.6
2,844,372	+		Pf1N1B4_2507	0.31	-0.0
2,844,373	-		Pf1N1B4_2507	0.32	+1.6
2,844,373	-		Pf1N1B4_2507	0.32	-1.8
2,844,408	+		Pf1N1B4_2507	0.54	+0.0
2,844,408	+		Pf1N1B4_2507	0.54	-0.4
2,844,409	-		Pf1N1B4_2507	0.54	+0.1
2,844,409	-		Pf1N1B4_2507	0.54	+2.6
2,844,415	+				+2.4
2,844,497	+				+1.0
2,844,497	+				+1.1
2,844,497	+				-1.9
2,844,556	+				-0.8
2,844,592	+				-0.2
2,844,592	+				+0.1
2,844,627	-				-0.9
2,844,688	+				-0.9
2,844,689	-				-0.3
2,844,689	-				+0.3
2,844,716	+				-0.0
2,844,716	+				+0.0
2,844,716	+				-0.5
2,844,716	+				-0.3
2,844,779	+				+0.1
2,844,780	-				-0.9
2,844,903	-				-0.5
2,844,906	+				-0.9
2,844,906	+				-1.6
2,844,906	+				+1.4
2,844,906	+				+1.2
2,844,906	+				+0.6
2,844,906	+				-0.9
2,844,906	+				+1.0
2,844,906	+				+0.7
2,844,906	+				+0.0
2,844,907	-				-1.4
2,844,907	-				+0.0
2,844,907	-				-0.2
2,844,985	-				+0.4
2,845,148	+		Pf1N1B4_2508	0.29	+1.8
2,845,148	+		Pf1N1B4_2508	0.29	-1.4
2,845,149	-		Pf1N1B4_2508	0.30	-0.5
2,845,149	-		Pf1N1B4_2508	0.30	-0.8
2,845,149	-		Pf1N1B4_2508	0.30	-1.3
2,845,301	+		Pf1N1B4_2508	0.79	+1.8
2,845,301	+				+1.4
2,845,301	+		Pf1N1B4_2508	0.79	-0.4
2,845,301	+		Pf1N1B4_2508	0.79	+1.1
2,845,301	+		Pf1N1B4_2508	0.79	-0.6
2,845,301	+		Pf1N1B4_2508	0.79	+0.1
2,845,301	+		Pf1N1B4_2508	0.79	+0.2
2,845,301	+		Pf1N1B4_2508	0.79	+0.7
2,845,301	+		Pf1N1B4_2508	0.79	-1.8
2,845,301	+		Pf1N1B4_2508	0.79	+0.4
2,845,301	+		Pf1N1B4_2508	0.79	+1.4
2,845,301	+		Pf1N1B4_2508	0.79	-1.2
2,845,301	+		Pf1N1B4_2508	0.79	-0.5
2,845,301	+		Pf1N1B4_2508	0.79	-0.9
2,845,302	-		Pf1N1B4_2508	0.79	-1.9
2,845,302	-		Pf1N1B4_2508	0.79	+1.2
2,845,302	-		Pf1N1B4_2508	0.79	-1.9
2,845,302	-		Pf1N1B4_2508	0.79	-0.9
2,845,302	-		Pf1N1B4_2508	0.79	+2.0
2,845,302	-		Pf1N1B4_2508	0.79	-0.4
2,845,302	-		Pf1N1B4_2508	0.79	-0.5
2,845,302	-		Pf1N1B4_2508	0.79	+0.8
2,845,302	-		Pf1N1B4_2508	0.79	-0.6
2,845,302	-		Pf1N1B4_2508	0.79	-0.7
2,845,302	-		Pf1N1B4_2508	0.79	-0.3
2,845,302	-		Pf1N1B4_2508	0.79	-0.8
2,845,302	-		Pf1N1B4_2508	0.79	-1.2
2,845,302	-		Pf1N1B4_2508	0.79	+0.1
2,845,302	-		Pf1N1B4_2508	0.79	-1.4
2,845,302	-		Pf1N1B4_2508	0.79	-0.9
2,845,303	+		Pf1N1B4_2508	0.80	-0.2
2,845,304	-		Pf1N1B4_2508	0.80	-2.5
2,845,304	-		Pf1N1B4_2508	0.80	-1.6
2,845,304	-		Pf1N1B4_2508	0.80	-0.6
2,845,304	-		Pf1N1B4_2508	0.80	+0.7
2,845,371	+				-0.6
2,845,371	+				-0.2
2,845,371	+				+0.5
2,845,372	-				+2.4
2,845,525	+				+1.0
2,845,532	-				-0.3
2,845,532	-				-0.5
2,845,607	-				-1.4
2,845,681	+				+0.6
2,845,682	-				-0.1
2,845,727	+				-0.2
2,845,727	+				+0.2
2,845,728	-				-2.1
2,845,728	-				-1.1
2,845,728	-				+1.4
2,845,728	-				-0.1
2,845,728	-				-0.0
2,845,730	-				-0.4
2,845,818	+				+0.6
2,845,818	+				-0.6
2,845,819	-				+1.1
2,845,819	-				-0.5
2,845,819	-				-0.2
2,845,819	-				+0.4
2,845,819	-				+1.4
2,845,819	-				-1.6
2,845,826	+				+0.7
2,845,826	+				+0.7
2,845,827	-				-0.2
2,845,827	-				+2.1
2,845,827	-				-0.2
2,845,827	-				+0.8
2,845,878	-		Pf1N1B4_2509	0.41	+1.0
2,846,001	+				+2.4
2,846,002	-				+0.1
2,846,133	+		Pf1N1B4_2510	0.44	-1.2
2,846,133	+		Pf1N1B4_2510	0.44	-0.9
2,846,134	-		Pf1N1B4_2510	0.45	+0.3
2,846,134	-		Pf1N1B4_2510	0.45	+0.7
2,846,134	-		Pf1N1B4_2510	0.45	-1.8
2,846,140	-		Pf1N1B4_2510	0.47	-0.9
2,846,140	-		Pf1N1B4_2510	0.47	-1.4
2,846,204	+		Pf1N1B4_2510	0.75	+0.1
2,846,205	-		Pf1N1B4_2510	0.75	+1.4
2,846,231	+		Pf1N1B4_2510	0.86	+0.1
2,846,243	+				-0.9
2,846,243	+				-0.5
2,846,252	+				-0.2
2,846,253	-				-0.9
2,846,253	-				+1.2
2,846,253	-				+0.2
2,846,318	+		Pf1N1B4_2511	0.11	+2.1
2,846,319	-		Pf1N1B4_2511	0.11	+0.4