Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1998

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
2,279,958	+		Pf1N1B4_1995	0.64	-0.9
2,279,958	+		Pf1N1B4_1995	0.64	+1.6
2,279,958	+		Pf1N1B4_1995	0.64	-0.2
2,279,959	-		Pf1N1B4_1995	0.64	+0.2
2,280,013	+		Pf1N1B4_1995	0.72	+2.3
2,280,013	+		Pf1N1B4_1995	0.72	+0.9
2,280,014	-		Pf1N1B4_1995	0.72	-1.2
2,280,014	-		Pf1N1B4_1995	0.72	+0.2
2,280,014	-		Pf1N1B4_1995	0.72	+0.4
2,280,017	+		Pf1N1B4_1995	0.73	-0.4
2,280,017	+		Pf1N1B4_1995	0.73	-2.0
2,280,017	+		Pf1N1B4_1995	0.73	-0.7
2,280,018	-		Pf1N1B4_1995	0.73	+0.6
2,280,018	-		Pf1N1B4_1995	0.73	+1.6
2,280,251	+		Pf1N1B4_1996	0.15	-0.5
2,280,252	-		Pf1N1B4_1996	0.15	-0.4
2,280,275	+		Pf1N1B4_1996	0.22	-1.0
2,280,278	+		Pf1N1B4_1996	0.23	-0.4
2,280,278	+		Pf1N1B4_1996	0.23	-1.2
2,280,278	+		Pf1N1B4_1996	0.23	+2.2
2,280,278	+		Pf1N1B4_1996	0.23	+0.8
2,280,279	-		Pf1N1B4_1996	0.23	+1.3
2,280,279	-		Pf1N1B4_1996	0.23	-0.2
2,280,279	-		Pf1N1B4_1996	0.23	-1.4
2,280,303	+		Pf1N1B4_1996	0.30	+0.3
2,280,303	+		Pf1N1B4_1996	0.30	-2.9
2,280,304	-		Pf1N1B4_1996	0.30	-0.7
2,280,362	+		Pf1N1B4_1996	0.47	-0.0
2,280,362	+		Pf1N1B4_1996	0.47	-0.7
2,280,362	+		Pf1N1B4_1996	0.47	-0.0
2,280,363	-		Pf1N1B4_1996	0.47	+1.4
2,280,363	-		Pf1N1B4_1996	0.47	-0.4
2,280,556	+				+0.1
2,280,556	+				-0.7
2,280,556	+				-1.4
2,280,894	+				+0.4
2,280,894	+				-0.7
2,280,894	+				+0.8
2,281,112	+		Pf1N1B4_1998	0.28	-1.4
2,281,113	-		Pf1N1B4_1998	0.29	-0.3
2,281,113	-		Pf1N1B4_1998	0.29	-1.2
2,281,113	-		Pf1N1B4_1998	0.29	+1.6
2,281,314	+		Pf1N1B4_1998	0.61	-1.2
2,281,314	+		Pf1N1B4_1998	0.61	-1.2
2,281,314	+		Pf1N1B4_1998	0.61	-1.0
2,281,315	-		Pf1N1B4_1998	0.62	-1.2
2,281,315	-		Pf1N1B4_1998	0.62	-0.4
2,281,315	-		Pf1N1B4_1998	0.62	-2.1
2,281,315	-		Pf1N1B4_1998	0.62	-0.4
2,281,326	+		Pf1N1B4_1998	0.63	+0.1
2,281,468	+		Pf1N1B4_1998	0.87	-0.0
2,281,548	-				+1.3
2,281,548	-				+1.4
2,281,548	-				+1.3
2,281,548	-				-1.6
2,281,577	-				+2.4
2,281,577	-				-0.4
2,281,577	-				-0.0
2,281,577	-				+0.3
2,281,678	+				-0.4
2,281,678	+				-1.2
2,281,678	+				-1.0
2,281,679	-				-0.2
2,281,679	-				+0.8
2,281,679	-				-0.1
2,281,679	-				-1.2
2,281,679	-				-0.4
2,281,679	-				-0.5
2,281,692	+				+1.6
2,281,692	+				-1.7
2,281,693	-				-1.2
2,281,693	-				+0.6
2,281,897	+		Pf1N1B4_1999	0.48	-0.3
2,281,898	-		Pf1N1B4_1999	0.49	+1.0
2,281,898	-		Pf1N1B4_1999	0.49	+1.3
2,281,899	+		Pf1N1B4_1999	0.49	+0.3
2,281,899	+		Pf1N1B4_1999	0.49	-0.7
2,281,899	+		Pf1N1B4_1999	0.49	-1.6
2,281,900	-		Pf1N1B4_1999	0.49	-0.9
2,281,900	-		Pf1N1B4_1999	0.49	-0.2
2,281,900	-		Pf1N1B4_1999	0.49	+1.4
2,281,961	+		Pf1N1B4_1999	0.64	-0.7
2,281,961	+		Pf1N1B4_1999	0.64	+0.3
2,281,961	+		Pf1N1B4_1999	0.64	-0.7
2,281,962	-		Pf1N1B4_1999	0.64	+0.5
2,281,962	-		Pf1N1B4_1999	0.64	-0.7
2,281,962	-		Pf1N1B4_1999	0.64	-0.7
2,281,962	-		Pf1N1B4_1999	0.64	-2.1
2,281,962	-		Pf1N1B4_1999	0.64	+1.6
2,282,132	+				-1.2
2,282,132	+				-2.0
2,282,133	-				+0.3
2,282,133	-				+0.3
2,282,133	-				-0.5
2,282,133	-				+1.0
2,282,143	+				-1.2
2,282,143	+				+1.0
2,282,143	+				-0.6
2,282,144	-				-0.0
2,282,144	-				+0.9
2,282,165	+				+0.5
2,282,239	+				+0.1
2,282,239	+				+0.4
2,282,239	+				+0.2
2,282,239	+				-1.0
2,282,240	-				+0.8
2,282,240	-				-0.4
2,282,347	+		Pf1N1B4_2000	0.13	-0.2
2,282,368	+		Pf1N1B4_2000	0.16	-1.4
2,282,368	+		Pf1N1B4_2000	0.16	+0.3
2,282,368	+		Pf1N1B4_2000	0.16	+3.2
2,282,368	+		Pf1N1B4_2000	0.16	+2.5
2,282,368	+		Pf1N1B4_2000	0.16	+1.0
2,282,369	-		Pf1N1B4_2000	0.16	-2.9
2,282,369	-		Pf1N1B4_2000	0.16	+1.1
2,282,369	-		Pf1N1B4_2000	0.16	+0.6
2,282,376	-		Pf1N1B4_2000	0.17	+1.0
2,282,376	-		Pf1N1B4_2000	0.17	+2.2
2,282,427	+		Pf1N1B4_2000	0.22	-0.2
2,282,427	+		Pf1N1B4_2000	0.22	-1.0
2,282,427	+		Pf1N1B4_2000	0.22	+2.2
2,282,428	-		Pf1N1B4_2000	0.23	+0.9
2,282,428	-		Pf1N1B4_2000	0.23	-0.7