Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03078

Experiment: PYE with Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.015 mg/ml
3,227,167	+		CCNA_03076	0.73	-0.5
3,227,180	-		CCNA_03076	0.73	-0.9
3,227,192	+		CCNA_03076	0.74	-0.0
3,227,192	+		CCNA_03076	0.74	+0.1
3,227,192	+		CCNA_03076	0.74	-1.3
3,227,192	+		CCNA_03076	0.74	-0.1
3,227,192	+		CCNA_03076	0.74	-1.7
3,227,200	-		CCNA_03076	0.74	-0.5
3,227,200	-		CCNA_03076	0.74	+0.5
3,227,200	-		CCNA_03076	0.74	-0.8
3,227,200	-		CCNA_03076	0.74	-1.3
3,227,200	-		CCNA_03076	0.74	-0.6
3,227,200	-		CCNA_03076	0.74	-0.6
3,227,200	-		CCNA_03076	0.74	-0.3
3,227,230	-		CCNA_03076	0.76	+0.7
3,227,234	-		CCNA_03076	0.76	-0.4
3,227,276	-		CCNA_03076	0.78	-1.8
3,227,276	-		CCNA_03076	0.78	-0.9
3,227,280	-		CCNA_03076	0.78	-1.1
3,227,315	+		CCNA_03076	0.79	+0.2
3,227,322	-		CCNA_03076	0.80	-1.9
3,227,328	-		CCNA_03076	0.80	-1.3
3,227,328	-		CCNA_03076	0.80	-0.6
3,227,356	+		CCNA_03076	0.81	+0.1
3,227,356	+		CCNA_03076	0.81	-0.8
3,227,382	+		CCNA_03076	0.82	-0.6
3,227,390	-		CCNA_03076	0.83	-0.2
3,227,397	+		CCNA_03076	0.83	+1.2
3,227,442	+		CCNA_03076	0.85	-0.9
3,227,452	+		CCNA_03076	0.85	+0.2
3,227,453	+		CCNA_03076	0.85	+1.1
3,227,455	+		CCNA_03076	0.86	-1.2
3,227,471	-		CCNA_03076	0.86	+0.1
3,227,501	+		CCNA_03076	0.88	+1.4
3,227,542	+		CCNA_03076	0.89	+0.7
3,227,542	+		CCNA_03076	0.89	-0.8
3,227,542	+		CCNA_03076	0.89	+0.4
3,227,542	+		CCNA_03076	0.89	-1.0
3,227,542	+		CCNA_03076	0.89	+1.4
3,227,542	+		CCNA_03076	0.89	-0.5
3,227,542	+		CCNA_03076	0.89	-1.4
3,227,542	+		CCNA_03076	0.89	+0.2
3,227,550	-		CCNA_03076	0.90	-0.6
3,227,550	-		CCNA_03076	0.90	+1.4
3,227,550	-		CCNA_03076	0.90	-2.5
3,227,550	-				+1.1
3,227,550	-		CCNA_03076	0.90	+1.1
3,227,561	+				-0.1
3,227,640	-				-0.0
3,227,655	-				-1.4
3,227,696	+				-0.9
3,227,701	+				+1.1
3,227,701	+				-0.2
3,227,701	+				-0.4
3,227,701	+				+2.3
3,227,704	-				-1.0
3,227,709	-				+0.4
3,227,709	-				-3.1
3,227,709	-				-1.4
3,227,713	+				+0.9
3,227,721	-				-0.7
3,227,721	-				-2.0
3,227,734	+				+0.8
3,227,734	+				+1.0
3,227,749	+				+1.4
3,227,749	+				-0.6
3,227,756	-				+0.0
3,227,757	-				+0.8
3,227,759	+				+0.2
3,227,776	+				+1.3
3,227,782	+				+0.5
3,227,783	+				+1.4
3,227,783	+				+0.5
3,227,822	+				+0.5
3,227,842	+				+0.5
3,227,842	+				-0.2
3,227,947	+				-1.8
3,227,949	-				+1.4
3,227,949	-				-0.1
3,227,949	-				+1.0
3,227,972	+				-1.2
3,227,972	+				-1.0
3,228,047	+		CCNA_03077	0.48	+0.2
3,228,047	+		CCNA_03077	0.48	+0.0
3,228,047	+		CCNA_03077	0.48	-1.0
3,228,047	+		CCNA_03077	0.48	+0.2
3,228,055	-		CCNA_03077	0.52	-0.5
3,228,057	+		CCNA_03077	0.53	-0.7
3,228,057	+		CCNA_03077	0.53	-1.7
3,228,101	-		CCNA_03077	0.77	-0.0
3,228,121	-		CCNA_03077	0.88	-2.0
3,228,129	-				-1.7
3,228,238	-		CCNA_03078	0.82	+1.1
3,228,238	-		CCNA_03078	0.82	-1.9
3,228,270	+				-1.8
3,228,270	+				-0.2
3,228,278	-				-2.9
3,228,280	+				-1.4
3,228,313	+				+0.6
3,228,318	+				-1.0
3,228,318	+				-1.6
3,228,328	-		CCNA_03079	0.10	-1.1
3,228,370	-		CCNA_03079	0.23	-0.6
3,228,370	-		CCNA_03079	0.23	+1.0
3,228,398	+		CCNA_03079	0.31	+1.2
3,228,398	+		CCNA_03079	0.31	+0.5
3,228,430	-		CCNA_03079	0.40	-1.7
3,228,495	-		CCNA_03079	0.60	-1.1
3,228,534	-		CCNA_03079	0.71	-0.5
3,228,551	+		CCNA_03079	0.76	+1.0
3,228,559	-		CCNA_03079	0.79	-0.8
3,228,575	+		CCNA_03079	0.84	-0.9
3,228,575	+		CCNA_03079	0.84	-0.2
3,228,575	+		CCNA_03079	0.84	-0.8
3,228,575	+		CCNA_03079	0.84	-0.5
3,228,583	-				-1.9
3,228,589	+				-0.5
3,228,589	+				+0.2
3,228,860	+				+1.1
3,228,894	-		CCNA_03884	0.27	-1.1
3,228,904	-		CCNA_03884	0.32	-1.7
3,228,909	+		CCNA_03884	0.35	+1.3
3,228,909	+		CCNA_03884	0.35	-0.4
3,228,909	+		CCNA_03884	0.35	-1.8
3,228,909	+		CCNA_03884	0.35	-0.4
3,228,909	+		CCNA_03884	0.35	+1.0
3,228,909	+		CCNA_03884	0.35	-0.6
3,228,909	+		CCNA_03884	0.35	-0.3
3,228,917	-		CCNA_03884	0.39	-1.4
3,228,917	-		CCNA_03884	0.39	+0.4
3,228,917	-		CCNA_03884	0.39	-0.9
3,228,922	-		CCNA_03884	0.42	+1.4
3,228,928	-		CCNA_03884	0.46	-0.1
3,228,933	+		CCNA_03884	0.48	-0.5
3,228,996	+		CCNA_03884	0.83	-2.6
3,229,034	+				-0.2
3,229,034	+				+1.9
3,229,042	+				-1.5
3,229,067	+				-0.8
3,229,075	-				+0.0
3,229,075	-				+0.0
3,229,109	+		CCNA_03081	0.11	-1.5
3,229,117	-		CCNA_03081	0.13	+0.3
3,229,171	-		CCNA_03081	0.26	+0.9
3,229,208	-		CCNA_03081	0.35	-0.4
3,229,220	+		CCNA_03081	0.38	-0.7