Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03037

Experiment: PYE with Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.015 mg/ml
3,190,345	-				+0.2
3,190,403	-				+1.2
3,190,405	+				-1.6
3,190,405	+				+0.4
3,190,405	+				-1.2
3,190,405	+				-0.3
3,190,410	+				-3.1
3,190,413	-				+2.7
3,190,418	+				-1.1
3,190,445	+		CCNA_03036	0.10	+1.5
3,190,474	+		CCNA_03036	0.13	+0.9
3,190,479	+		CCNA_03036	0.13	+0.7
3,190,492	-		CCNA_03036	0.15	+1.1
3,190,549	+		CCNA_03036	0.21	+1.8
3,190,557	-		CCNA_03036	0.21	+0.1
3,190,557	-		CCNA_03036	0.21	+1.9
3,190,592	-		CCNA_03036	0.25	+1.5
3,190,599	-		CCNA_03036	0.26	+1.4
3,190,602	+		CCNA_03036	0.26	+0.9
3,190,602	+		CCNA_03036	0.26	-1.0
3,190,660	+		CCNA_03036	0.32	-1.3
3,190,670	+		CCNA_03036	0.33	+0.5
3,190,687	+		CCNA_03036	0.35	+0.8
3,190,785	-		CCNA_03036	0.45	-0.7
3,190,785	-		CCNA_03036	0.45	+1.1
3,190,806	+		CCNA_03036	0.47	+0.5
3,190,806	+		CCNA_03036	0.47	-0.0
3,190,814	-		CCNA_03036	0.48	+0.9
3,190,814	-		CCNA_03036	0.48	+1.4
3,190,814	-		CCNA_03036	0.48	+0.4
3,190,886	-		CCNA_03036	0.55	+1.3
3,190,891	+		CCNA_03036	0.56	+0.4
3,190,905	+		CCNA_03036	0.57	-0.5
3,190,905	+		CCNA_03036	0.57	-1.5
3,190,905	+		CCNA_03036	0.57	+0.6
3,190,905	+		CCNA_03036	0.57	+1.4
3,190,905	+		CCNA_03036	0.57	-2.1
3,190,913	-		CCNA_03036	0.58	+0.1
3,190,963	-		CCNA_03036	0.63	+0.3
3,190,963	-		CCNA_03036	0.63	+1.5
3,191,026	+		CCNA_03036	0.69	+1.3
3,191,035	+		CCNA_03036	0.70	-0.5
3,191,043	-		CCNA_03036	0.71	+1.0
3,191,043	-		CCNA_03036	0.71	+0.2
3,191,070	-		CCNA_03036	0.74	+2.1
3,191,077	-		CCNA_03036	0.75	-0.6
3,191,090	-		CCNA_03036	0.76	-0.7
3,191,092	+		CCNA_03036	0.76	-1.2
3,191,092	+		CCNA_03036	0.76	-0.9
3,191,125	+		CCNA_03036	0.80	+2.7
3,191,125	+		CCNA_03036	0.80	+0.1
3,191,126	+		CCNA_03036	0.80	-0.0
3,191,133	-		CCNA_03036	0.80	+0.2
3,191,134	-		CCNA_03036	0.80	+1.9
3,191,184	-		CCNA_03036	0.86	-2.4
3,191,214	+		CCNA_03036	0.89	-3.4
3,191,222	-		CCNA_03036	0.89	+1.2
3,191,330	+				-2.5
3,191,333	-				+1.6
3,191,333	-				+1.3
3,191,338	-				+0.4
3,191,424	+				-0.8
3,191,430	+				+0.5
3,191,431	+				-0.9
3,191,432	-				+0.7
3,191,439	-				+1.0
3,191,480	+		CCNA_03037	0.10	+0.6
3,191,519	-		CCNA_03037	0.13	+0.6
3,191,526	+		CCNA_03037	0.13	-0.1
3,191,539	-		CCNA_03037	0.14	+2.4
3,191,602	+		CCNA_03037	0.18	-1.2
3,191,611	+		CCNA_03037	0.19	+0.6
3,191,624	+		CCNA_03037	0.20	-0.3
3,191,624	+		CCNA_03037	0.20	+0.0
3,191,624	+		CCNA_03037	0.20	+0.5
3,191,632	-		CCNA_03037	0.20	+0.5
3,191,632	-		CCNA_03037	0.20	+1.1
3,191,654	+		CCNA_03037	0.22	+2.1
3,191,678	+		CCNA_03037	0.23	-0.3
3,191,717	-		CCNA_03037	0.26	+0.5
3,191,747	+		CCNA_03037	0.28	-1.4
3,191,747	-		CCNA_03037	0.28	+0.9
3,191,754	+		CCNA_03037	0.28	-1.2
3,191,770	+		CCNA_03037	0.29	-0.8
3,191,788	-		CCNA_03037	0.31	-0.3
3,191,802	+		CCNA_03037	0.31	+0.9
3,191,810	-		CCNA_03037	0.32	+0.3
3,191,811	-		CCNA_03037	0.32	+0.2
3,191,813	+		CCNA_03037	0.32	+2.1
3,191,818	+		CCNA_03037	0.33	+0.2
3,191,846	-		CCNA_03037	0.34	+1.7
3,191,846	-		CCNA_03037	0.34	-0.0
3,191,853	-		CCNA_03037	0.35	+0.8
3,191,956	+		CCNA_03037	0.42	+0.6
3,191,956	+		CCNA_03037	0.42	-0.8
3,191,964	-		CCNA_03037	0.42	+1.4
3,191,964	-		CCNA_03037	0.42	+0.4
3,191,979	-		CCNA_03037	0.43	+1.7
3,191,984	-		CCNA_03037	0.44	+0.9
3,191,989	-		CCNA_03037	0.44	-0.0
3,192,008	-		CCNA_03037	0.45	+0.7
3,192,035	-		CCNA_03037	0.47	+0.5
3,192,047	+		CCNA_03037	0.48	+0.5
3,192,052	+		CCNA_03037	0.48	-0.4
3,192,055	-		CCNA_03037	0.48	+0.6
3,192,065	-		CCNA_03037	0.49	+1.5
3,192,091	+		CCNA_03037	0.51	+0.2
3,192,116	-		CCNA_03037	0.52	-0.2
3,192,122	+		CCNA_03037	0.53	-0.1
3,192,127	+		CCNA_03037	0.53	-1.1
3,192,130	-		CCNA_03037	0.53	+2.8
3,192,132	+		CCNA_03037	0.53	+0.8
3,192,135	-		CCNA_03037	0.54	+1.5
3,192,171	+		CCNA_03037	0.56	+0.3
3,192,212	-		CCNA_03037	0.59	+2.5
3,192,238	-		CCNA_03037	0.60	+1.5
3,192,294	-		CCNA_03037	0.64	+1.5
3,192,318	-		CCNA_03037	0.66	+1.3
3,192,393	+		CCNA_03037	0.71	+0.6
3,192,394	-		CCNA_03037	0.71	+0.7
3,192,423	-		CCNA_03037	0.73	+0.8
3,192,455	-		CCNA_03037	0.75	+1.4
3,192,478	+		CCNA_03037	0.76	-0.9
3,192,507	-		CCNA_03037	0.78	+1.0
3,192,537	-		CCNA_03037	0.80	+0.7
3,192,539	+		CCNA_03037	0.80	-1.9
3,192,547	+		CCNA_03037	0.81	+0.2
3,192,547	-		CCNA_03037	0.81	+0.8
3,192,547	-		CCNA_03037	0.81	-2.4
3,192,549	+		CCNA_03037	0.81	+0.1
3,192,567	-		CCNA_03037	0.82	-0.1
3,192,576	-		CCNA_03037	0.83	+1.2
3,192,591	-		CCNA_03037	0.84	-0.5
3,192,596	-		CCNA_03037	0.84	+1.5
3,192,628	+		CCNA_03037	0.86	+1.0
3,192,633	+		CCNA_03037	0.87	+0.9
3,192,641	-		CCNA_03037	0.87	+0.9
3,192,641	-		CCNA_03037	0.87	+0.4
3,192,643	+		CCNA_03037	0.87	-0.8
3,192,651	-		CCNA_03037	0.88	+0.5
3,192,656	-		CCNA_03037	0.88	-0.8
3,192,713	-				+1.1
3,192,749	-				+0.2
3,192,801	+				+0.7
3,192,851	+				-0.1
3,192,859	-				+1.5
3,192,870	+				+0.5
3,192,870	+				-1.2
3,192,878	-				+2.1
3,192,915	+				-0.5
3,192,926	-				+1.9
3,192,934	+				-1.4
3,192,942	-				+1.3
3,192,942	-				+1.1
3,192,942	-				+1.5
3,192,948	-				+1.5
3,192,952	+				-2.0
3,192,970	-				+1.7
3,192,971	-				+0.8
3,193,016	-		CCNA_03038	0.12	+1.0
3,193,016	-		CCNA_03038	0.12	+1.7
3,193,021	-		CCNA_03038	0.12	+1.4
3,193,092	+		CCNA_03038	0.17	-0.4
3,193,092	+		CCNA_03038	0.17	+1.1
3,193,092	+		CCNA_03038	0.17	-1.1
3,193,100	-		CCNA_03038	0.17	+2.0
3,193,100	-		CCNA_03038	0.17	+1.7
3,193,132	+		CCNA_03038	0.19	-1.1
3,193,132	+		CCNA_03038	0.19	+0.1
3,193,137	+		CCNA_03038	0.19	+1.4
3,193,140	-		CCNA_03038	0.20	-0.0
3,193,140	-		CCNA_03038	0.20	+0.7
3,193,140	-		CCNA_03038	0.20	+0.3
3,193,140	-		CCNA_03038	0.20	+1.2
3,193,140	-		CCNA_03038	0.20	+1.3
3,193,150	-		CCNA_03038	0.20	+0.1
3,193,160	-		CCNA_03038	0.21	+1.7
3,193,178	+		CCNA_03038	0.22	+1.7
3,193,183	+		CCNA_03038	0.22	-1.2
3,193,186	-		CCNA_03038	0.23	+1.3
3,193,186	-		CCNA_03038	0.23	+0.8
3,193,186	-		CCNA_03038	0.23	+0.8
3,193,186	-		CCNA_03038	0.23	+2.1
3,193,186	-		CCNA_03038	0.23	+1.7
3,193,204	-		CCNA_03038	0.24	+1.8
3,193,213	-		CCNA_03038	0.24	-1.0
3,193,228	-		CCNA_03038	0.25	+0.4
3,193,230	+		CCNA_03038	0.25	+0.8
3,193,248	-		CCNA_03038	0.27	+0.7
3,193,257	+		CCNA_03038	0.27	+1.8
3,193,257	+		CCNA_03038	0.27	-0.3
3,193,265	-		CCNA_03038	0.28	+1.3
3,193,265	-		CCNA_03038	0.28	-2.5
3,193,265	-		CCNA_03038	0.28	+1.4
3,193,265	-		CCNA_03038	0.28	+2.4
3,193,274	+		CCNA_03038	0.28	-2.0
3,193,282	+		CCNA_03038	0.29	-1.7
3,193,287	-		CCNA_03038	0.29	+1.9
3,193,311	-		CCNA_03038	0.31	-0.2
3,193,383	+		CCNA_03038	0.35	-1.2
3,193,386	-		CCNA_03038	0.36	+1.4
3,193,414	-		CCNA_03038	0.37	-1.2
3,193,430	+		CCNA_03038	0.38	-1.1
3,193,434	-		CCNA_03038	0.39	+1.4
3,193,450	+		CCNA_03038	0.40	+0.4
3,193,466	+		CCNA_03038	0.41	+0.5
3,193,469	-		CCNA_03038	0.41	+1.6
3,193,494	+		CCNA_03038	0.42	+0.7
3,193,499	+		CCNA_03038	0.43	+1.3
3,193,502	-		CCNA_03038	0.43	+1.0
3,193,507	-		CCNA_03038	0.43	+0.9
3,193,548	-		CCNA_03038	0.46	+1.6
3,193,548	-		CCNA_03038	0.46	+1.6
3,193,548	-		CCNA_03038	0.46	+2.9
3,193,571	-		CCNA_03038	0.47	+0.9
3,193,582	+		CCNA_03038	0.48	-0.4
3,193,601	-		CCNA_03038	0.49	+3.0
3,193,632	+		CCNA_03038	0.51	-1.0
3,193,641	+		CCNA_03038	0.52	-1.2
3,193,668	-		CCNA_03038	0.54	+1.3
3,193,677	-		CCNA_03038	0.54	+1.3
3,193,678	+		CCNA_03038	0.54	-1.7
3,193,701	-		CCNA_03038	0.56	+3.2
3,193,724	+		CCNA_03038	0.57	+0.9
3,193,724	-		CCNA_03038	0.57	+1.7
3,193,749	+		CCNA_03038	0.59	+1.1
3,193,749	+		CCNA_03038	0.59	+0.4
3,193,769	+		CCNA_03038	0.60	-0.5
3,193,777	-		CCNA_03038	0.61	-0.0
3,193,788	+		CCNA_03038	0.61	-0.2
3,193,788	+		CCNA_03038	0.61	-1.5
3,193,811	+		CCNA_03038	0.63	-0.2