Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02808

Experiment: PYE with Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.015 mg/ml
2,962,531	+		CCNA_02807	0.19	-0.3
2,962,591	-		CCNA_02807	0.24	+1.1
2,962,593	+		CCNA_02807	0.24	+1.3
2,962,612	+		CCNA_02807	0.26	-1.2
2,962,613	-		CCNA_02807	0.26	-0.6
2,962,613	-		CCNA_02807	0.26	+3.6
2,962,620	-		CCNA_02807	0.26	+0.8
2,962,635	-		CCNA_02807	0.27	-3.2
2,962,720	+		CCNA_02807	0.34	+0.8
2,962,759	+		CCNA_02807	0.37	-1.3
2,962,762	-		CCNA_02807	0.38	+0.6
2,962,767	-		CCNA_02807	0.38	+0.8
2,962,767	-		CCNA_02807	0.38	-2.2
2,962,795	-		CCNA_02807	0.40	-0.1
2,962,800	+		CCNA_02807	0.41	-0.3
2,962,827	-		CCNA_02807	0.43	+1.5
2,962,865	-		CCNA_02807	0.46	-1.6
2,962,899	+		CCNA_02807	0.49	-1.1
2,962,937	+		CCNA_02807	0.52	-0.9
2,962,957	+		CCNA_02807	0.53	-0.7
2,962,996	-		CCNA_02807	0.57	-0.6
2,963,050	-		CCNA_02807	0.61	-0.4
2,963,058	-		CCNA_02807	0.62	+0.1
2,963,224	+		CCNA_02807	0.75	+1.7
2,963,235	+		CCNA_02807	0.76	-1.0
2,963,265	-		CCNA_02807	0.78	-0.4
2,963,316	+		CCNA_02807	0.83	+0.2
2,963,347	-		CCNA_02807	0.85	+1.6
2,963,347	-		CCNA_02807	0.85	+2.0
2,963,348	-		CCNA_02807	0.85	+0.1
2,963,406	+				+2.4
2,963,411	+				+0.3
2,963,437	+				-0.8
2,963,460	-				+0.1
2,963,467	-				-1.8
2,963,476	+				+0.6
2,963,486	+				-1.0
2,963,507	+				+0.3
2,963,507	+				+0.1
2,963,507	+				+0.8
2,963,517	+				+3.6
2,963,521	-				-1.0
2,963,539	-				-0.6
2,963,600	+		CCNA_02808	0.21	+3.0
2,963,613	-		CCNA_02808	0.24	+1.0
2,963,618	-		CCNA_02808	0.25	+2.3
2,963,634	+		CCNA_02808	0.28	+3.3
2,963,636	-		CCNA_02808	0.28	+0.5
2,963,666	-		CCNA_02808	0.35	-2.1
2,963,670	+		CCNA_02808	0.35	-0.6
2,963,670	+		CCNA_02808	0.35	+4.0
2,963,712	-		CCNA_02808	0.44	+1.5
2,963,725	+		CCNA_02808	0.47	+3.0
2,963,863	-		CCNA_02808	0.76	-0.5
2,963,881	+		CCNA_02808	0.79	-0.0
2,963,884	-		CCNA_02808	0.80	+0.9
2,963,886	+		CCNA_02808	0.80	-0.5
2,963,889	-		CCNA_02808	0.81	-0.8
2,963,894	-		CCNA_02808	0.82	+1.0
2,963,927	-		CCNA_02808	0.89	-0.1
2,963,927	-		CCNA_02808	0.89	-0.7
2,963,938	+				-1.1
2,963,938	+				-1.1
2,963,951	-				+2.0
2,963,951	-				+0.9
2,963,997	-				+0.3
2,964,005	-				+0.0
2,964,041	+				+1.2
2,964,058	+				+0.2
2,964,058	+				+1.2
2,964,164	-				-0.2
2,964,207	+				-2.2
2,964,246	+				-0.5
2,964,279	+				+0.8
2,964,279	+				+0.1
2,964,279	+				+2.0
2,964,279	+				+0.8
2,964,287	-				-2.2
2,964,312	+		CCNA_02809	0.10	+2.0
2,964,312	+		CCNA_02809	0.10	+0.2
2,964,320	-		CCNA_02809	0.11	-0.5
2,964,320	-		CCNA_02809	0.11	-0.1
2,964,320	-		CCNA_02809	0.11	+1.3
2,964,320	-		CCNA_02809	0.11	+0.8
2,964,333	+		CCNA_02809	0.11	-0.1
2,964,338	+		CCNA_02809	0.11	-2.3
2,964,338	+		CCNA_02809	0.11	-1.6
2,964,346	-		CCNA_02809	0.11	-0.8
2,964,354	-		CCNA_02809	0.12	+0.4
2,964,373	+		CCNA_02809	0.12	+1.7
2,964,373	+		CCNA_02809	0.12	+1.4
2,964,373	+		CCNA_02809	0.12	-1.8
2,964,381	-		CCNA_02809	0.12	+0.6
2,964,381	-		CCNA_02809	0.12	-1.0
2,964,381	-		CCNA_02809	0.12	-0.6
2,964,381	-		CCNA_02809	0.12	+0.2
2,964,381	-		CCNA_02809	0.12	-1.1
2,964,390	+		CCNA_02809	0.13	-1.4
2,964,390	+		CCNA_02809	0.13	-0.0
2,964,395	+		CCNA_02809	0.13	-1.3
2,964,398	-		CCNA_02809	0.13	-0.0
2,964,403	-		CCNA_02809	0.13	-0.7
2,964,433	+		CCNA_02809	0.14	-1.5
2,964,433	+		CCNA_02809	0.14	-0.9
2,964,440	+		CCNA_02809	0.14	+1.4
2,964,441	-		CCNA_02809	0.14	+2.7
2,964,448	-		CCNA_02809	0.15	-0.2
2,964,448	-		CCNA_02809	0.15	-1.5
2,964,448	-		CCNA_02809	0.15	-0.6
2,964,448	-		CCNA_02809	0.15	+2.6
2,964,448	-		CCNA_02809	0.15	+0.7
2,964,449	-		CCNA_02809	0.15	+0.1
2,964,453	+		CCNA_02809	0.15	+0.1
2,964,528	+		CCNA_02809	0.17	-0.3
2,964,543	+		CCNA_02809	0.17	-0.2
2,964,543	+		CCNA_02809	0.17	-0.5
2,964,548	+		CCNA_02809	0.18	-1.0
2,964,569	+		CCNA_02809	0.18	-0.9
2,964,577	-		CCNA_02809	0.19	-1.4
2,964,659	+		CCNA_02809	0.21	-2.0
2,964,661	+		CCNA_02809	0.21	-1.5
2,964,757	-		CCNA_02809	0.24	-0.4
2,964,759	-		CCNA_02809	0.24	-0.4
2,964,823	+		CCNA_02809	0.26	-0.9
2,964,828	+		CCNA_02809	0.26	+0.5
2,964,828	+		CCNA_02809	0.26	-0.8
2,964,840	+		CCNA_02809	0.27	+2.3
2,964,864	-		CCNA_02809	0.27	-1.6
2,964,878	+		CCNA_02809	0.28	+1.8
2,964,928	+		CCNA_02809	0.29	-2.1
2,964,928	+		CCNA_02809	0.29	+1.2
2,964,928	+		CCNA_02809	0.29	-1.2
2,964,936	-		CCNA_02809	0.30	-2.1
2,964,942	+		CCNA_02809	0.30	+1.7
2,964,942	+		CCNA_02809	0.30	+0.5
2,964,955	-		CCNA_02809	0.30	-1.8