Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02355

Experiment: PYE with Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.015 mg/ml
2,493,316	-				-1.4
2,493,368	+				+0.1
2,493,435	+				+0.6
2,493,438	+				+0.4
2,493,442	-				+0.1
2,493,443	-				+0.8
2,493,500	+				+0.3
2,493,502	-				-0.3
2,493,561	+				-0.7
2,493,569	+				+1.6
2,493,569	-				+1.1
2,493,607	-				+1.8
2,493,658	-				+1.3
2,493,689	-				-1.0
2,493,727	+		CCNA_02354	0.13	-1.3
2,493,730	-		CCNA_02354	0.14	-1.1
2,493,735	-		CCNA_02354	0.15	-2.1
2,493,769	-		CCNA_02354	0.21	-1.4
2,493,787	+		CCNA_02354	0.24	+1.9
2,493,787	+		CCNA_02354	0.24	-2.3
2,493,795	-		CCNA_02354	0.25	-1.6
2,493,795	-		CCNA_02354	0.25	-0.2
2,493,848	+		CCNA_02354	0.35	-0.9
2,493,855	+		CCNA_02354	0.36	+1.6
2,493,869	+		CCNA_02354	0.38	+2.0
2,493,869	+		CCNA_02354	0.38	+0.7
2,493,877	-		CCNA_02354	0.40	-1.0
2,493,877	-		CCNA_02354	0.40	-0.2
2,493,949	+		CCNA_02354	0.52	-0.4
2,493,977	+		CCNA_02354	0.57	-1.3
2,493,999	+		CCNA_02354	0.61	-0.3
2,494,000	+		CCNA_02354	0.62	+0.2
2,494,020	+		CCNA_02354	0.65	-1.1
2,494,035	+		CCNA_02354	0.68	+2.1
2,494,106	+		CCNA_02354	0.80	-0.3
2,494,109	-		CCNA_02354	0.81	-1.7
2,494,109	-		CCNA_02354	0.81	+1.0
2,494,109	-		CCNA_02354	0.81	-2.5
2,494,114	-		CCNA_02354	0.82	-0.9
2,494,139	+		CCNA_02354	0.86	+0.3
2,494,162	+				-1.0
2,494,228	+				+0.8
2,494,228	+				+1.6
2,494,228	+				+0.9
2,494,255	-				-1.2
2,494,303	+				-0.1
2,494,304	-				-1.4
2,494,304	-				-0.8
2,494,306	+				+0.0
2,494,306	+				-0.1
2,494,306	+				-1.2
2,494,308	+				-0.0
2,494,308	+				+2.9
2,494,308	+				-0.1
2,494,308	+				-2.5
2,494,308	+				-0.8
2,494,313	+				-0.7
2,494,314	-				+0.1
2,494,316	-				-1.7
2,494,316	-				-0.7
2,494,316	-				-0.6
2,494,318	+				-0.7
2,494,336	-				-3.7
2,494,347	+				+0.6
2,494,357	-				-1.7
2,494,371	-		CCNA_02355	0.10	-0.7
2,494,420	+		CCNA_02355	0.17	-1.9
2,494,464	+		CCNA_02355	0.23	+0.7
2,494,481	+		CCNA_02355	0.25	-0.9
2,494,510	+		CCNA_02355	0.29	-1.2
2,494,510	+		CCNA_02355	0.29	-2.1
2,494,510	+		CCNA_02355	0.29	-1.1
2,494,510	+		CCNA_02355	0.29	+0.1
2,494,510	+		CCNA_02355	0.29	-0.0
2,494,510	+		CCNA_02355	0.29	-0.5
2,494,510	+		CCNA_02355	0.29	-1.5
2,494,510	+		CCNA_02355	0.29	-0.8
2,494,510	+		CCNA_02355	0.29	+1.8
2,494,510	+		CCNA_02355	0.29	-2.3
2,494,510	+		CCNA_02355	0.29	-0.9
2,494,510	+		CCNA_02355	0.29	-1.5
2,494,518	-		CCNA_02355	0.30	-1.5
2,494,518	-		CCNA_02355	0.30	-1.1
2,494,518	-		CCNA_02355	0.30	+1.4
2,494,518	-		CCNA_02355	0.30	+0.3
2,494,518	-		CCNA_02355	0.30	-1.5
2,494,518	-		CCNA_02355	0.30	+1.9
2,494,518	-		CCNA_02355	0.30	-0.0
2,494,518	-		CCNA_02355	0.30	-0.1
2,494,518	-		CCNA_02355	0.30	-2.2
2,494,518	-		CCNA_02355	0.30	-0.5
2,494,537	-		CCNA_02355	0.33	-0.7
2,494,561	+		CCNA_02355	0.36	-0.5
2,494,561	+		CCNA_02355	0.36	-1.2
2,494,587	-		CCNA_02355	0.40	-1.4
2,494,591	+		CCNA_02355	0.40	-0.0
2,494,591	+		CCNA_02355	0.40	-1.5
2,494,641	-		CCNA_02355	0.47	+2.0
2,494,647	+		CCNA_02355	0.48	+0.3
2,494,647	+		CCNA_02355	0.48	-1.6
2,494,665	-		CCNA_02355	0.51	+0.7
2,494,676	+		CCNA_02355	0.52	+0.2
2,494,750	+		CCNA_02355	0.62	+0.3
2,494,758	-		CCNA_02355	0.63	-1.2
2,494,782	+		CCNA_02355	0.67	-0.1
2,494,787	+		CCNA_02355	0.67	-0.7
2,494,819	-		CCNA_02355	0.72	+0.7
2,494,879	+		CCNA_02355	0.80	+0.2
2,494,879	+		CCNA_02355	0.80	-0.3
2,494,882	-		CCNA_02355	0.80	-0.3
2,494,892	-		CCNA_02355	0.82	+0.3
2,494,893	+		CCNA_02355	0.82	-0.3
2,494,901	-		CCNA_02355	0.83	+1.2
2,494,915	+		CCNA_02355	0.85	+0.4
2,494,955	+				+1.2
2,494,963	-				-1.2
2,494,968	-				+2.6
2,494,972	+				+1.3
2,494,973	-				+1.2
2,494,980	-				-1.7
2,494,985	-				+0.3
2,494,989	+				+0.5
2,494,997	-				-1.0
2,495,011	+				+1.5
2,495,019	-				-2.4
2,495,019	-				-1.2
2,495,101	-				+0.6
2,495,110	+				-0.9
2,495,110	+				+1.2
2,495,118	-				-1.2
2,495,151	+				-1.6
2,495,188	+				+0.1
2,495,190	-				-0.2
2,495,197	-				+0.3
2,495,200	+				-2.0
2,495,237	+				-1.4
2,495,277	-				+0.1
2,495,277	-				+0.8
2,495,289	-				-0.4
2,495,289	-				+1.0
2,495,289	-				-0.4
2,495,289	-				+1.4
2,495,289	-				+0.2
2,495,312	-				+0.5
2,495,347	+				+0.5
2,495,349	+				-1.6
2,495,369	-				+1.1
2,495,371	+				+0.0
2,495,419	+				-0.3
2,495,427	-				+1.1
2,495,463	-				-2.4
2,495,464	-				+0.6
2,495,493	-		CCNA_02356	0.10	+0.2
2,495,513	+		CCNA_02356	0.12	-1.0
2,495,513	+		CCNA_02356	0.12	+0.1
2,495,513	+		CCNA_02356	0.12	-0.7
2,495,513	+		CCNA_02356	0.12	-0.2
2,495,518	+		CCNA_02356	0.13	-0.9
2,495,536	-		CCNA_02356	0.15	+1.1
2,495,547	-		CCNA_02356	0.16	+1.8
2,495,625	-		CCNA_02356	0.24	-0.1
2,495,640	+		CCNA_02356	0.25	+1.0
2,495,648	-		CCNA_02356	0.26	+1.1
2,495,648	-		CCNA_02356	0.26	-1.1
2,495,723	-		CCNA_02356	0.34	-0.9
2,495,783	+		CCNA_02356	0.40	+0.9
2,495,813	+		CCNA_02356	0.43	+0.3
2,495,821	-		CCNA_02356	0.44	-0.7
2,495,821	-		CCNA_02356	0.44	-0.4
2,495,821	-		CCNA_02356	0.44	-1.0
2,495,821	-		CCNA_02356	0.44	-0.8
2,495,910	+		CCNA_02356	0.53	-1.2
2,495,910	+		CCNA_02356	0.53	-1.1
2,495,955	-		CCNA_02356	0.58	-0.8
2,495,955	-		CCNA_02356	0.58	-0.5