Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02121

Experiment: PYE with Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.015 mg/ml
2,270,329	-		CCNA_02120	0.14	-0.2
2,270,340	-		CCNA_02120	0.15	-0.4
2,270,349	+		CCNA_02120	0.16	-0.4
2,270,351	+		CCNA_02120	0.16	-0.5
2,270,368	+		CCNA_02120	0.18	-2.2
2,270,459	+		CCNA_02120	0.27	-1.3
2,270,459	+		CCNA_02120	0.27	-0.9
2,270,543	-		CCNA_02120	0.36	-0.6
2,270,545	-		CCNA_02120	0.36	+0.9
2,270,554	+		CCNA_02120	0.37	-2.9
2,270,609	+		CCNA_02120	0.42	-1.7
2,270,609	+		CCNA_02120	0.42	-0.1
2,270,617	-		CCNA_02120	0.43	+0.8
2,270,663	+		CCNA_02120	0.48	-0.8
2,270,686	+		CCNA_02120	0.50	-0.1
2,270,686	+		CCNA_02120	0.50	+1.8
2,270,717	+		CCNA_02120	0.54	-1.8
2,270,747	+		CCNA_02120	0.57	-0.2
2,270,747	+		CCNA_02120	0.57	-0.9
2,270,778	-		CCNA_02120	0.60	-2.1
2,270,783	-		CCNA_02120	0.60	-1.9
2,270,807	-		CCNA_02120	0.63	-0.9
2,270,822	+		CCNA_02120	0.64	-1.3
2,270,830	-		CCNA_02120	0.65	-2.6
2,270,846	+		CCNA_02120	0.67	-1.5
2,270,848	+		CCNA_02120	0.67	-0.8
2,270,865	-		CCNA_02120	0.69	+2.5
2,270,963	-		CCNA_02120	0.79	-2.9
2,271,032	-		CCNA_02120	0.86	-0.7
2,271,032	-		CCNA_02120	0.86	-0.8
2,271,100	-				-1.5
2,271,117	+				-0.1
2,271,117	+				-0.4
2,271,125	-				-2.7
2,271,125	-				-0.3
2,271,134	+				+1.0
2,271,169	-				+0.2
2,271,176	-				+0.3
2,271,182	-				+0.5
2,271,184	-				-1.1
2,271,185	+				+1.1
2,271,213	-				+1.0
2,271,219	+				+0.0
2,271,226	+				+0.2
2,271,248	-				+0.0
2,271,341	-				-0.6
2,271,344	+				-0.6
2,271,346	-				+0.2
2,271,393	+				-1.9
2,271,401	-				-1.2
2,271,412	-				-0.6
2,271,423	+				+1.0
2,271,431	-				-0.9
2,271,450	+				+0.3
2,271,450	+				+0.5
2,271,497	+				+0.0
2,271,504	-				+1.1
2,271,509	+				-2.6
2,271,526	+				-0.7
2,271,534	-				-1.8
2,271,534	-				-0.2
2,271,685	+		CCNA_02121	0.15	-1.4
2,271,685	+		CCNA_02121	0.15	-1.7
2,271,690	+		CCNA_02121	0.15	-1.4
2,271,703	-		CCNA_02121	0.15	+1.2
2,271,719	+		CCNA_02121	0.16	-1.1
2,271,719	+		CCNA_02121	0.16	+1.1
2,271,724	+		CCNA_02121	0.16	+0.4
2,271,727	-		CCNA_02121	0.16	-2.9
2,271,756	+		CCNA_02121	0.17	-0.8
2,271,761	+		CCNA_02121	0.18	-2.3
2,271,894	-		CCNA_02121	0.23	-0.6
2,271,921	+		CCNA_02121	0.24	+1.3
2,271,961	-		CCNA_02121	0.25	+1.3
2,271,989	-		CCNA_02121	0.26	-0.4
2,272,004	-		CCNA_02121	0.27	-1.1
2,272,009	-		CCNA_02121	0.27	-0.2
2,272,032	-		CCNA_02121	0.28	-0.5
2,272,049	+		CCNA_02121	0.29	+0.3
2,272,049	+		CCNA_02121	0.29	+0.1
2,272,062	-		CCNA_02121	0.29	-1.4
2,272,104	-		CCNA_02121	0.31	-0.3
2,272,124	-		CCNA_02121	0.32	-1.3
2,272,134	+		CCNA_02121	0.32	-0.7
2,272,142	-		CCNA_02121	0.32	-1.9
2,272,142	-		CCNA_02121	0.32	-0.3
2,272,147	-		CCNA_02121	0.32	+0.2
2,272,266	-		CCNA_02121	0.37	-0.5
2,272,281	+		CCNA_02121	0.38	-1.3
2,272,281	+		CCNA_02121	0.38	+0.5
2,272,286	+		CCNA_02121	0.38	-2.7
2,272,293	+		CCNA_02121	0.38	+0.0
2,272,293	+		CCNA_02121	0.38	-1.0
2,272,328	+		CCNA_02121	0.39	-2.9
2,272,336	-		CCNA_02121	0.40	-0.1
2,272,373	+		CCNA_02121	0.41	+0.1
2,272,378	+		CCNA_02121	0.41	+0.3
2,272,381	-		CCNA_02121	0.42	-1.2
2,272,406	-		CCNA_02121	0.43	-1.3
2,272,406	-		CCNA_02121	0.43	-2.2
2,272,406	-		CCNA_02121	0.43	-1.0
2,272,472	-		CCNA_02121	0.45	+1.3
2,272,502	+		CCNA_02121	0.46	-0.1
2,272,553	-		CCNA_02121	0.48	-3.2
2,272,624	+		CCNA_02121	0.51	-0.1
2,272,637	+		CCNA_02121	0.51	-2.8
2,272,638	+		CCNA_02121	0.52	+0.6
2,272,649	+		CCNA_02121	0.52	-1.3
2,272,654	+		CCNA_02121	0.52	-0.1
2,272,706	+		CCNA_02121	0.54	+0.5
2,272,706	+		CCNA_02121	0.54	-0.4
2,272,706	+		CCNA_02121	0.54	-2.5
2,272,706	+		CCNA_02121	0.54	+0.7
2,272,706	+		CCNA_02121	0.54	+1.8
2,272,714	-		CCNA_02121	0.54	-0.1
2,272,714	-		CCNA_02121	0.54	+1.3
2,272,731	+		CCNA_02121	0.55	-2.6
2,272,754	+		CCNA_02121	0.56	-1.1
2,272,783	+		CCNA_02121	0.57	-0.5
2,272,823	+		CCNA_02121	0.59	+1.0
2,272,823	+		CCNA_02121	0.59	-2.8
2,272,823	+		CCNA_02121	0.59	-0.7
2,272,823	+		CCNA_02121	0.59	-0.7
2,272,823	+		CCNA_02121	0.59	-2.4
2,272,823	+		CCNA_02121	0.59	+0.5
2,272,831	-		CCNA_02121	0.59	+0.4
2,272,831	-		CCNA_02121	0.59	-0.7
2,272,906	-		CCNA_02121	0.62	-2.5
2,273,015	+				+0.2
2,273,018	-		CCNA_02121	0.66	-0.1
2,273,023	-		CCNA_02121	0.66	+1.3
2,273,101	+		CCNA_02121	0.69	-2.0
2,273,117	+		CCNA_02121	0.70	-0.4
2,273,160	-		CCNA_02121	0.72	-1.6
2,273,178	-		CCNA_02121	0.72	-0.2
2,273,190	+		CCNA_02121	0.73	-1.6
2,273,190	+		CCNA_02121	0.73	-0.5
2,273,190	+		CCNA_02121	0.73	-1.3
2,273,190	+		CCNA_02121	0.73	-1.7
2,273,252	+		CCNA_02121	0.75	-0.8
2,273,260	-		CCNA_02121	0.76	-1.7
2,273,260	-		CCNA_02121	0.76	-2.0
2,273,277	+				+1.8
2,273,311	+		CCNA_02121	0.78	-1.4
2,273,320	+		CCNA_02121	0.78	+0.3
2,273,333	-		CCNA_02121	0.78	-1.5
2,273,337	+		CCNA_02121	0.79	-0.5
2,273,345	-		CCNA_02121	0.79	-1.7
2,273,373	-		CCNA_02121	0.80	-0.2
2,273,425	+		CCNA_02121	0.82	-1.7
2,273,434	+		CCNA_02121	0.82	+0.9
2,273,479	+		CCNA_02121	0.84	-2.0
2,273,488	-		CCNA_02121	0.84	-0.5
2,273,496	+		CCNA_02121	0.85	-1.4
2,273,561	+		CCNA_02121	0.87	+0.4
2,273,615	+		CCNA_02121	0.89	+0.5
2,273,618	-		CCNA_02121	0.89	-1.7
2,273,623	-		CCNA_02121	0.90	+0.8
2,273,623	-		CCNA_02121	0.90	-0.8
2,273,637	+				+0.8
2,273,759	+				-1.8
2,273,759	+				+0.8
2,273,762	-				-0.2
2,273,765	+				-1.0
2,273,780	-				-3.5
2,273,974	+		CCNA_02122	0.13	+0.2
2,273,974	+		CCNA_02122	0.13	-0.2
2,273,995	+		CCNA_02122	0.16	-1.7
2,274,061	-		CCNA_02122	0.25	-0.1
2,274,089	-		CCNA_02122	0.29	-1.4
2,274,183	+		CCNA_02122	0.42	+1.2
2,274,207	+		CCNA_02122	0.45	-2.7
2,274,219	+		CCNA_02122	0.47	-0.0
2,274,229	+		CCNA_02122	0.49	-1.7
2,274,237	-		CCNA_02122	0.50	-2.5
2,274,237	-		CCNA_02122	0.50	-0.7
2,274,269	-		CCNA_02122	0.54	-1.5
2,274,270	-		CCNA_02122	0.54	-0.1
2,274,280	-		CCNA_02122	0.56	-1.4
2,274,367	+		CCNA_02122	0.68	-2.2
2,274,367	+		CCNA_02122	0.68	+0.3
2,274,375	-		CCNA_02122	0.69	+0.3
2,274,380	+		CCNA_02122	0.70	-1.8
2,274,453	-		CCNA_02122	0.80	-1.5
2,274,532	-				-1.1
2,274,556	-				+0.0
2,274,576	-				-0.7