Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01406

Experiment: PYE with Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.015 mg/ml
1,523,896	+				+2.1
1,523,906	+				+1.6
1,523,906	+				+2.1
1,524,029	-				+0.6
1,524,069	-				+1.7
1,524,132	-		CCNA_01405	0.17	+0.7
1,524,215	+		CCNA_01405	0.42	+0.9
1,524,223	-		CCNA_01405	0.45	+1.1
1,524,223	-		CCNA_01405	0.45	+0.9
1,524,223	-		CCNA_01405	0.45	+3.2
1,524,276	+		CCNA_01405	0.61	-2.0
1,524,276	-		CCNA_01405	0.61	+0.8
1,524,284	-		CCNA_01405	0.63	+1.5
1,524,320	-		CCNA_01405	0.74	+0.6
1,524,341	-		CCNA_01405	0.81	+2.6
1,524,499	+				+2.6
1,524,532	-				+1.4
1,524,593	+				+1.7
1,524,593	+				-1.1
1,524,626	-				+2.6
1,524,640	+				-1.2
1,524,653	-				+2.5
1,524,703	-				+1.7
1,524,703	-				+1.3
1,524,704	-				+2.1
1,524,714	-		CCNA_01406	0.11	+2.4
1,524,721	+		CCNA_01406	0.12	-1.4
1,524,767	-		CCNA_01406	0.17	+2.2
1,524,783	+		CCNA_01406	0.19	+0.8
1,524,783	+		CCNA_01406	0.19	-0.6
1,524,791	-		CCNA_01406	0.20	+2.5
1,524,791	-		CCNA_01406	0.20	+2.0
1,524,913	+		CCNA_01406	0.34	-0.3
1,524,921	-		CCNA_01406	0.35	+3.2
1,524,932	+		CCNA_01406	0.36	-1.4
1,524,955	+				+1.6
1,524,956	-				+4.8
1,524,963	-		CCNA_01406	0.40	+1.8
1,524,985	-		CCNA_01406	0.42	+1.6
1,524,987	-		CCNA_01406	0.43	+1.7
1,525,010	+		CCNA_01406	0.45	-0.3
1,525,063	+		CCNA_01406	0.52	-0.6
1,525,071	+		CCNA_01406	0.52	-2.3
1,525,095	-		CCNA_01406	0.55	+1.6
1,525,101	+		CCNA_01406	0.56	+0.0
1,525,210	-		CCNA_01406	0.69	+2.9
1,525,251	-		CCNA_01406	0.73	+0.6
1,525,252	+		CCNA_01406	0.74	+1.0
1,525,282	+		CCNA_01406	0.77	-0.6
1,525,287	+		CCNA_01406	0.78	-2.1
1,525,295	-		CCNA_01406	0.79	+2.0
1,525,342	+		CCNA_01406	0.84	-0.7
1,525,350	-		CCNA_01406	0.85	+0.4
1,525,350	-		CCNA_01406	0.85	+0.4
1,525,350	-		CCNA_01406	0.85	+1.5
1,525,440	+				+0.5
1,525,467	-				+2.7
1,525,473	+				+1.3
1,525,488	+				+1.2
1,525,496	-				+2.4
1,525,507	-				+1.2
1,525,510	+				-1.3
1,525,524	-				-0.8
1,525,591	-				-2.8
1,525,599	+		CCNA_01407	0.10	-0.9
1,525,647	+		CCNA_01407	0.18	-1.5
1,525,675	-		CCNA_01407	0.22	-2.2
1,525,675	-		CCNA_01407	0.22	-1.4
1,525,675	-		CCNA_01407	0.22	-0.9
1,525,687	+		CCNA_01407	0.24	+0.9
1,525,690	-		CCNA_01407	0.24	+0.1
1,525,701	+		CCNA_01407	0.26	-2.0
1,525,842	+		CCNA_01407	0.48	-1.7
1,525,896	+				+2.6
1,525,922	+		CCNA_01407	0.61	-1.2
1,525,962	+		CCNA_01407	0.67	-0.2
1,526,028	-		CCNA_01407	0.78	-1.1
1,526,043	+		CCNA_01407	0.80	+0.6
1,526,051	-		CCNA_01407	0.82	-0.8
1,526,051	-		CCNA_01407	0.82	-1.0
1,526,075	+		CCNA_01407	0.85	+0.4
1,526,075	+		CCNA_01407	0.85	+0.6
1,526,083	-		CCNA_01407	0.87	-0.2
1,526,112	+				-0.5
1,526,246	+		CCNA_01408	0.21	+0.5
1,526,246	+		CCNA_01408	0.21	-0.9
1,526,254	-		CCNA_01408	0.23	+1.1
1,526,254	-		CCNA_01408	0.23	+0.6
1,526,379	+		CCNA_01408	0.54	+1.9
1,526,392	+		CCNA_01408	0.58	-1.6
1,526,392	+		CCNA_01408	0.58	-0.6
1,526,393	-		CCNA_01408	0.58	-0.5
1,526,405	-		CCNA_01408	0.61	-1.7
1,526,433	-		CCNA_01408	0.68	-0.0
1,526,464	-		CCNA_01408	0.76	+3.2