Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05805

Experiment: soil sample 5; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil sample 5; outgrowth in LB
1,235,434	+		ABZR87_RS05800	0.22	+0.1
1,235,434	+		ABZR87_RS05800	0.22	-0.8
1,235,434	+		ABZR87_RS05800	0.22	+2.0
1,235,434	+		ABZR87_RS05800	0.22	-0.6
1,235,434	+		ABZR87_RS05800	0.22	-0.7
1,235,434	+		ABZR87_RS05800	0.22	-0.9
1,235,434	+		ABZR87_RS05800	0.22	+0.5
1,235,434	+		ABZR87_RS05800	0.22	+0.2
1,235,434	+		ABZR87_RS05800	0.22	+0.3
1,235,434	+		ABZR87_RS05800	0.22	-0.6
1,235,434	+		ABZR87_RS05800	0.22	-0.0
1,235,434	+		ABZR87_RS05800	0.22	-0.4
1,235,434	+		ABZR87_RS05800	0.22	-0.1
1,235,435	-		ABZR87_RS05800	0.22	+0.4
1,235,435	-		ABZR87_RS05800	0.22	-0.2
1,235,435	-		ABZR87_RS05800	0.22	+1.1
1,235,435	-		ABZR87_RS05800	0.22	-0.8
1,235,435	-		ABZR87_RS05800	0.22	-0.2
1,235,435	-		ABZR87_RS05800	0.22	-0.2
1,235,704	+		ABZR87_RS05800	0.43	-0.6
1,235,704	+		ABZR87_RS05800	0.43	-1.0
1,235,704	+		ABZR87_RS05800	0.43	-0.5
1,235,705	-		ABZR87_RS05800	0.43	-1.4
1,235,760	+		ABZR87_RS05800	0.48	-0.6
1,235,777	+		ABZR87_RS05800	0.49	+0.6
1,235,777	+		ABZR87_RS05800	0.49	+3.3
1,235,778	-		ABZR87_RS05800	0.49	-0.3
1,235,778	-		ABZR87_RS05800	0.49	+0.0
1,235,800	+		ABZR87_RS05800	0.51	+0.8
1,235,800	+		ABZR87_RS05800	0.51	+0.2
1,235,800	+		ABZR87_RS05800	0.51	+0.3
1,235,800	+		ABZR87_RS05800	0.51	+0.4
1,235,800	+		ABZR87_RS05800	0.51	+0.6
1,235,801	-		ABZR87_RS05800	0.51	+0.4
1,235,801	-		ABZR87_RS05800	0.51	-0.0
1,235,801	-		ABZR87_RS05800	0.51	+0.4
1,235,801	-		ABZR87_RS05800	0.51	+0.7
1,235,801	-		ABZR87_RS05800	0.51	+1.9
1,235,801	-		ABZR87_RS05800	0.51	+0.2
1,235,843	+		ABZR87_RS05800	0.54	-1.1
1,235,843	+		ABZR87_RS05800	0.54	-1.0
1,235,843	+		ABZR87_RS05800	0.54	+1.4
1,235,843	+		ABZR87_RS05800	0.54	-1.0
1,235,843	+		ABZR87_RS05800	0.54	-1.0
1,235,844	-		ABZR87_RS05800	0.54	+1.1
1,235,844	-		ABZR87_RS05800	0.54	-0.2
1,235,844	-		ABZR87_RS05800	0.54	+1.2
1,235,844	-		ABZR87_RS05800	0.54	+0.3
1,235,944	+		ABZR87_RS05800	0.62	-0.5
1,235,944	+		ABZR87_RS05800	0.62	+0.9
1,235,944	+		ABZR87_RS05800	0.62	+0.4
1,235,945	-		ABZR87_RS05800	0.62	-0.7
1,236,071	-		ABZR87_RS05800	0.72	+0.1
1,236,160	+		ABZR87_RS05800	0.79	-0.0
1,236,161	-		ABZR87_RS05800	0.79	+0.1
1,236,183	+		ABZR87_RS05800	0.81	+0.8
1,236,183	+		ABZR87_RS05800	0.81	+0.2
1,236,229	+		ABZR87_RS05800	0.84	-1.1
1,236,230	-		ABZR87_RS05800	0.84	+1.8
1,236,230	-		ABZR87_RS05800	0.84	-1.5
1,236,232	+		ABZR87_RS05800	0.85	+0.3
1,236,232	+		ABZR87_RS05800	0.85	+0.5
1,236,233	-		ABZR87_RS05800	0.85	+0.6
1,236,233	-		ABZR87_RS05800	0.85	-0.1
1,236,233	-		ABZR87_RS05800	0.85	-0.1
1,236,245	-		ABZR87_RS05800	0.86	-0.1
1,236,245	-		ABZR87_RS05800	0.86	-0.1
1,236,246	+		ABZR87_RS05800	0.86	+0.3
1,236,246	+		ABZR87_RS05800	0.86	+0.9
1,236,246	+		ABZR87_RS05800	0.86	-0.9
1,236,246	+		ABZR87_RS05800	0.86	+0.3
1,236,246	+		ABZR87_RS05800	0.86	-0.6
1,236,246	+		ABZR87_RS05800	0.86	+0.6
1,236,247	-		ABZR87_RS05800	0.86	+0.2
1,236,247	-		ABZR87_RS05800	0.86	-1.8
1,236,411	+				-1.0
1,236,411	+				-0.1
1,236,411	+				-0.6
1,236,411	+				-0.1
1,236,411	+				+0.4
1,236,412	-				-0.2
1,236,412	-				-1.0
1,236,412	-				+0.2
1,236,412	-				+0.0
1,236,412	-				-0.2
1,236,439	+				+0.1
1,236,440	-				-0.0
1,236,440	-				+0.8
1,236,440	-				+0.2
1,236,440	-				-0.3
1,236,440	-				-0.5
1,236,440	-				-0.0
1,236,440	-				-0.4
1,236,479	+				-0.6
1,236,479	+				+0.6
1,236,480	-				+0.4
1,236,661	+		ABZR87_RS05805	0.16	+0.0
1,236,662	-		ABZR87_RS05805	0.16	+1.3
1,236,747	+		ABZR87_RS05805	0.22	+1.2
1,236,785	+		ABZR87_RS05805	0.25	+0.4
1,236,785	+		ABZR87_RS05805	0.25	-0.1
1,236,785	+		ABZR87_RS05805	0.25	+0.2
1,236,786	-		ABZR87_RS05805	0.25	+0.2
1,236,786	-		ABZR87_RS05805	0.25	+0.2
1,236,786	-		ABZR87_RS05805	0.25	+0.9
1,236,816	+		ABZR87_RS05805	0.27	+0.1
1,236,816	+		ABZR87_RS05805	0.27	-0.0
1,236,817	-		ABZR87_RS05805	0.27	+0.6
1,236,848	+		ABZR87_RS05805	0.29	-1.0
1,236,881	+		ABZR87_RS05805	0.31	-0.7
1,236,881	+		ABZR87_RS05805	0.31	+0.3
1,236,881	+		ABZR87_RS05805	0.31	-0.1
1,236,881	+		ABZR87_RS05805	0.31	+0.7
1,236,882	-		ABZR87_RS05805	0.31	+0.8
1,236,882	-		ABZR87_RS05805	0.31	+1.0
1,236,882	-		ABZR87_RS05805	0.31	+0.3
1,236,882	-		ABZR87_RS05805	0.31	+0.5
1,236,882	-		ABZR87_RS05805	0.31	+0.7
1,236,882	-		ABZR87_RS05805	0.31	+0.3
1,236,884	+		ABZR87_RS05805	0.31	-0.6
1,236,884	+		ABZR87_RS05805	0.31	+0.6
1,236,885	-		ABZR87_RS05805	0.31	+1.0
1,236,885	-		ABZR87_RS05805	0.31	+0.8
1,236,885	-		ABZR87_RS05805	0.31	-0.3
1,236,885	-		ABZR87_RS05805	0.31	-0.1
1,236,906	+		ABZR87_RS05805	0.33	+0.1
1,236,906	+		ABZR87_RS05805	0.33	+0.5
1,236,907	-		ABZR87_RS05805	0.33	+1.1
1,236,907	-		ABZR87_RS05805	0.33	-0.8
1,236,907	-		ABZR87_RS05805	0.33	+0.3
1,236,950	+		ABZR87_RS05805	0.36	-0.6
1,236,950	+		ABZR87_RS05805	0.36	-0.5
1,236,951	-		ABZR87_RS05805	0.36	+0.4
1,236,951	-		ABZR87_RS05805	0.36	+0.2
1,236,951	-		ABZR87_RS05805	0.36	+0.3
1,236,951	-		ABZR87_RS05805	0.36	+0.5
1,237,339	+		ABZR87_RS05805	0.63	-0.4
1,237,340	-		ABZR87_RS05805	0.63	+0.4
1,237,340	-		ABZR87_RS05805	0.63	+1.3
1,237,340	-		ABZR87_RS05805	0.63	-1.4
1,237,370	+		ABZR87_RS05805	0.65	+0.2
1,237,370	+		ABZR87_RS05805	0.65	-0.4
1,237,370	+		ABZR87_RS05805	0.65	+0.3
1,237,370	+		ABZR87_RS05805	0.65	-0.2
1,237,370	+		ABZR87_RS05805	0.65	+0.2
1,237,370	+		ABZR87_RS05805	0.65	-0.3
1,237,370	+		ABZR87_RS05805	0.65	-0.3
1,237,370	+		ABZR87_RS05805	0.65	-0.2
1,237,371	-		ABZR87_RS05805	0.65	+0.1
1,237,371	-		ABZR87_RS05805	0.65	+1.6
1,237,371	-		ABZR87_RS05805	0.65	-0.9
1,237,371	-		ABZR87_RS05805	0.65	-0.6
1,237,371	-		ABZR87_RS05805	0.65	+1.6
1,237,371	-		ABZR87_RS05805	0.65	-0.2
1,237,371	-		ABZR87_RS05805	0.65	-0.5
1,237,372	+		ABZR87_RS05805	0.65	-0.5
1,237,372	+		ABZR87_RS05805	0.65	+0.8
1,237,372	+		ABZR87_RS05805	0.65	+0.7
1,237,372	+		ABZR87_RS05805	0.65	-0.2
1,237,373	-		ABZR87_RS05805	0.65	+0.2
1,237,373	-		ABZR87_RS05805	0.65	-1.1
1,237,486	+		ABZR87_RS05805	0.73	-0.1
1,237,486	+		ABZR87_RS05805	0.73	+2.6
1,237,487	-		ABZR87_RS05805	0.73	-0.1
1,237,487	-		ABZR87_RS05805	0.73	-0.4
1,237,487	-		ABZR87_RS05805	0.73	-0.1
1,237,487	-		ABZR87_RS05805	0.73	-0.7
1,237,533	+		ABZR87_RS05805	0.76	-0.3
1,237,534	-		ABZR87_RS05805	0.76	-0.5
1,237,534	-		ABZR87_RS05805	0.76	+0.0
1,237,534	-		ABZR87_RS05805	0.76	-1.0
1,237,534	-		ABZR87_RS05805	0.76	+0.5
1,237,534	-		ABZR87_RS05805	0.76	-0.1
1,237,544	+		ABZR87_RS05805	0.77	-0.5
1,237,544	+		ABZR87_RS05805	0.77	-0.6
1,237,545	-		ABZR87_RS05805	0.77	+0.7
1,237,623	+		ABZR87_RS05805	0.82	-0.0
1,237,624	-		ABZR87_RS05805	0.82	-0.0
1,237,669	-		ABZR87_RS05805	0.85	+0.1
1,237,795	-				+0.6
1,237,795	-				+0.6
1,237,822	-				+0.8
1,237,822	-				-0.2
1,237,845	+				-0.1
1,237,845	+				+0.8
1,237,845	+				+0.9
1,237,846	-				+0.1
1,237,846	-				+0.1
1,237,846	-				-0.1
1,237,875	+				+0.6
1,237,875	+				-0.1
1,237,875	+				+0.8
1,237,875	+				+0.8
1,237,876	-				-1.1
1,237,876	-				-0.2
1,237,876	-				-0.1
1,237,882	-				+0.7
1,237,882	-				+0.2
1,237,882	-				+1.1
1,237,882	-				-0.1
1,237,882	-				+1.6
1,237,963	+				-0.2
1,237,963	+				+0.4
1,237,964	-				-0.9
1,237,964	-				-0.9
1,237,980	+				-0.2
1,237,980	+				+0.3
1,237,980	+				-0.3
1,237,981	-				-0.3
1,237,983	+				-1.6
1,237,984	-				+2.3
1,237,984	-				+0.4
1,237,984	-				-0.2
1,238,102	+		ABZR87_RS05810	0.14	-0.7
1,238,102	+		ABZR87_RS05810	0.14	+0.6
1,238,103	-		ABZR87_RS05810	0.14	+0.5
1,238,104	+		ABZR87_RS05810	0.14	+1.6
1,238,104	+		ABZR87_RS05810	0.14	-0.3
1,238,104	+		ABZR87_RS05810	0.14	-0.9
1,238,104	+		ABZR87_RS05810	0.14	+0.1
1,238,104	+		ABZR87_RS05810	0.14	+0.2
1,238,104	+		ABZR87_RS05810	0.14	+0.2
1,238,105	-		ABZR87_RS05810	0.14	-0.1
1,238,105	-		ABZR87_RS05810	0.14	-0.2
1,238,105	-		ABZR87_RS05810	0.14	-0.8
1,238,105	-		ABZR87_RS05810	0.14	+0.5
1,238,105	-		ABZR87_RS05810	0.14	+0.6
1,238,105	-		ABZR87_RS05810	0.14	+0.3
1,238,105	-		ABZR87_RS05810	0.14	-0.4
1,238,105	-		ABZR87_RS05810	0.14	+0.3
1,238,105	-		ABZR87_RS05810	0.14	-0.1
1,238,140	-		ABZR87_RS05810	0.17	-0.9
1,238,140	-		ABZR87_RS05810	0.17	-0.1
1,238,158	+		ABZR87_RS05810	0.18	+1.9
1,238,158	+		ABZR87_RS05810	0.18	-0.3
1,238,703	+		ABZR87_RS05810	0.63	-0.5
1,238,703	+		ABZR87_RS05810	0.63	+0.3
1,238,704	-		ABZR87_RS05810	0.63	-0.0
1,238,810	+		ABZR87_RS05810	0.71	-0.3
1,238,811	-		ABZR87_RS05810	0.71	+0.5
1,238,843	+		ABZR87_RS05810	0.74	+0.1
1,238,843	+		ABZR87_RS05810	0.74	+0.3
1,238,844	-		ABZR87_RS05810	0.74	-0.5
1,238,846	+		ABZR87_RS05810	0.74	+0.6