Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2543

Experiment: Cisplatin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.00625 mg/ml
2,622,932	+				+0.8
2,622,943	-				-0.2
2,622,958	-				-1.2
2,623,200	+				-1.8
2,623,200	+				-3.2
2,623,227	+				+4.4
2,623,232	+				+0.4
2,623,235	-				+3.2
2,623,240	-				-0.2
2,623,265	+				-0.2
2,623,265	+				-1.2
2,623,267	+				-0.2
2,623,267	+				+0.6
2,623,307	+				-1.8
2,623,307	+				+2.7
2,623,343	-				-1.2
2,623,361	-				+2.8
2,623,376	+				+0.7
2,623,387	+				-0.2
2,623,405	-				-2.2
2,623,445	+	petJ	Synpcc7942_2542	0.19	-2.2
2,623,445	+	petJ	Synpcc7942_2542	0.19	+3.7
2,623,448	-	petJ	Synpcc7942_2542	0.20	+2.5
2,623,453	-	petJ	Synpcc7942_2542	0.22	+0.1
2,623,453	-	petJ	Synpcc7942_2542	0.22	-0.2
2,623,507	+	petJ	Synpcc7942_2542	0.37	+2.4
2,623,507	+	petJ	Synpcc7942_2542	0.37	+4.9
2,623,507	+	petJ	Synpcc7942_2542	0.37	+4.4
2,623,507	+	petJ	Synpcc7942_2542	0.37	+1.9
2,623,507	+	petJ	Synpcc7942_2542	0.37	-2.5
2,623,509	+	petJ	Synpcc7942_2542	0.38	-2.5
2,623,509	+	petJ	Synpcc7942_2542	0.38	+1.8
2,623,515	-	petJ	Synpcc7942_2542	0.39	+2.4
2,623,517	-	petJ	Synpcc7942_2542	0.40	+0.8
2,623,517	-	petJ	Synpcc7942_2542	0.40	-1.8
2,623,527	-	petJ	Synpcc7942_2542	0.43	-0.2
2,623,541	+	petJ	Synpcc7942_2542	0.47	+4.1
2,623,569	+	petJ	Synpcc7942_2542	0.55	+2.4
2,623,598	+	petJ	Synpcc7942_2542	0.63	-1.2
2,623,610	+	petJ	Synpcc7942_2542	0.67	+2.1
2,623,610	+				-0.2
2,623,611	-	petJ	Synpcc7942_2542	0.67	-1.2
2,623,615	+	petJ	Synpcc7942_2542	0.68	-1.8
2,623,618	-	petJ	Synpcc7942_2542	0.69	-0.2
2,623,625	+				-1.2
2,623,633	+	petJ	Synpcc7942_2542	0.73	+2.2
2,623,671	+	petJ	Synpcc7942_2542	0.84	-1.8
2,623,694	+				+1.7
2,623,694	-				-1.4
2,623,702	-				-0.2
2,623,714	-				-1.2
2,623,720	+				+5.8
2,623,720	+				+0.3
2,623,720	+				+3.6
2,623,728	-				+1.8
2,623,728	-				-1.2
2,623,728	-				-0.2
2,623,730	+				+2.8
2,623,730	+				+0.6
2,623,738	-				-2.2
2,623,740	+				+5.6
2,623,740	+				-2.5
2,623,747	-				-1.2
2,623,748	-				+2.7
2,623,748	-				+1.1
2,623,822	+		Synpcc7942_2543	0.11	+2.8
2,623,825	-		Synpcc7942_2543	0.12	+2.1
2,623,825	-		Synpcc7942_2543	0.12	-0.2
2,623,825	-		Synpcc7942_2543	0.12	+2.8
2,623,825	-		Synpcc7942_2543	0.12	-1.8
2,623,825	-		Synpcc7942_2543	0.12	+3.5
2,623,845	+		Synpcc7942_2543	0.15	-0.2
2,623,848	-		Synpcc7942_2543	0.15	+3.4
2,623,917	+		Synpcc7942_2543	0.25	-1.2
2,623,925	+		Synpcc7942_2543	0.26	+4.2
2,623,948	-		Synpcc7942_2543	0.29	+2.1
2,623,948	-		Synpcc7942_2543	0.29	+4.7
2,623,984	+		Synpcc7942_2543	0.34	-1.8
2,623,984	+		Synpcc7942_2543	0.34	+5.5
2,623,989	-		Synpcc7942_2543	0.35	+3.2
2,624,043	+		Synpcc7942_2543	0.43	+1.4
2,624,125	+		Synpcc7942_2543	0.54	+4.3
2,624,146	-		Synpcc7942_2543	0.57	+3.6
2,624,171	+		Synpcc7942_2543	0.61	+0.8
2,624,191	-		Synpcc7942_2543	0.63	-1.9
2,624,196	-		Synpcc7942_2543	0.64	+1.3
2,624,224	+		Synpcc7942_2543	0.68	+3.1
2,624,235	+		Synpcc7942_2543	0.70	+2.2
2,624,245	+		Synpcc7942_2543	0.71	+3.2
2,624,247	-		Synpcc7942_2543	0.71	+5.6
2,624,271	+		Synpcc7942_2543	0.75	+3.1
2,624,276	+		Synpcc7942_2543	0.75	-1.2
2,624,286	+		Synpcc7942_2543	0.77	+1.7
2,624,287	+		Synpcc7942_2543	0.77	-0.2
2,624,294	-		Synpcc7942_2543	0.78	-1.2
2,624,294	-		Synpcc7942_2543	0.78	-0.9
2,624,294	-		Synpcc7942_2543	0.78	+2.3
2,624,294	-		Synpcc7942_2543	0.78	+5.3
2,624,294	-		Synpcc7942_2543	0.78	-1.2
2,624,296	+		Synpcc7942_2543	0.78	+4.0
2,624,325	-		Synpcc7942_2543	0.82	+3.0
2,624,346	-		Synpcc7942_2543	0.85	+0.8
2,624,354	+		Synpcc7942_2543	0.86	-0.2
2,624,388	-				-0.2
2,624,428	+				-0.2
2,624,428	+				+0.8
2,624,428	+				-1.8
2,624,432	+				-0.2
2,624,451	+				-1.8
2,624,476	+				+2.0
2,624,484	-				+5.1
2,624,484	-				+0.8
2,624,484	-				-0.2
2,624,486	+				+4.2
2,624,494	-				+2.6
2,624,517	+				-1.3
2,624,527	-		Synpcc7942_2544	0.12	+2.5
2,624,535	-		Synpcc7942_2544	0.14	+3.1
2,624,572	+		Synpcc7942_2544	0.24	-0.2
2,624,579	+		Synpcc7942_2544	0.26	+4.1
2,624,597	+		Synpcc7942_2544	0.30	-0.2
2,624,617	+		Synpcc7942_2544	0.35	+0.1
2,624,625	-		Synpcc7942_2544	0.37	+0.8
2,624,661	+		Synpcc7942_2544	0.47	-0.2
2,624,661	+		Synpcc7942_2544	0.47	+3.1
2,624,669	+		Synpcc7942_2544	0.49	+2.4
2,624,706	+		Synpcc7942_2544	0.58	+6.0
2,624,706	+		Synpcc7942_2544	0.58	-1.2
2,624,714	-		Synpcc7942_2544	0.60	+2.4
2,624,771	+		Synpcc7942_2544	0.75	-1.2
2,624,771	+		Synpcc7942_2544	0.75	+2.0
2,624,771	+		Synpcc7942_2544	0.75	+4.4
2,624,779	-		Synpcc7942_2544	0.77	-1.2
2,624,779	-		Synpcc7942_2544	0.77	-1.8
2,624,797	+		Synpcc7942_2544	0.82	+2.2
2,624,802	+		Synpcc7942_2544	0.83	+2.2
2,624,802	-		Synpcc7942_2544	0.83	-1.8
2,624,804	+		Synpcc7942_2544	0.83	-0.8
2,624,807	+		Synpcc7942_2544	0.84	+1.4
2,624,807	+		Synpcc7942_2544	0.84	-2.2
2,624,807	+		Synpcc7942_2544	0.84	+4.0
2,624,807	-		Synpcc7942_2544	0.84	+1.7
2,624,812	-		Synpcc7942_2544	0.85	+3.6
2,624,812	-		Synpcc7942_2544	0.85	+4.3
2,624,812	-		Synpcc7942_2544	0.85	+3.1
2,624,812	-		Synpcc7942_2544	0.85	-0.2
2,624,812	-		Synpcc7942_2544	0.85	+2.7
2,624,815	-		Synpcc7942_2544	0.86	-2.8
2,624,815	-		Synpcc7942_2544	0.86	+2.6
2,624,815	-		Synpcc7942_2544	0.86	-0.2
2,624,815	-		Synpcc7942_2544	0.86	+0.4
2,624,815	-		Synpcc7942_2544	0.86	+0.5
2,624,815	-		Synpcc7942_2544	0.86	+1.0
2,624,843	+				-3.3
2,624,853	+				+2.3
2,624,853	+				+5.7
2,624,853	+				+0.8
2,624,861	-				-2.8
2,624,879	+				+2.7
2,624,920	-				+1.6