Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2243

Experiment: Cisplatin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.00625 mg/ml
2,307,261	+				-1.1
2,307,283	+				+1.0
2,307,306	-				+2.4
2,307,306	-				-0.1
2,307,308	+				+1.7
2,307,319	+				+3.3
2,307,349	-				-2.1
2,307,351	-				-2.9
2,307,358	+				-2.1
2,307,361	-				-1.1
2,307,433	+				+4.2
2,307,441	-				-1.1
2,307,443	+		Synpcc7942_2242	0.19	-3.1
2,307,459	+		Synpcc7942_2242	0.21	-1.1
2,307,459	+		Synpcc7942_2242	0.21	-0.1
2,307,459	+		Synpcc7942_2242	0.21	-1.1
2,307,467	-		Synpcc7942_2242	0.21	-3.1
2,307,469	+		Synpcc7942_2242	0.22	-1.1
2,307,474	+		Synpcc7942_2242	0.22	-3.5
2,307,511	-		Synpcc7942_2242	0.26	-0.1
2,307,511	-		Synpcc7942_2242	0.26	-2.1
2,307,519	-		Synpcc7942_2242	0.27	-0.1
2,307,523	+		Synpcc7942_2242	0.27	-1.7
2,307,523	+		Synpcc7942_2242	0.27	-0.1
2,307,531	-		Synpcc7942_2242	0.28	-1.1
2,307,536	-		Synpcc7942_2242	0.28	-3.3
2,307,538	+		Synpcc7942_2242	0.29	-0.1
2,307,538	+		Synpcc7942_2242	0.29	-1.1
2,307,542	+				-1.7
2,307,543	+		Synpcc7942_2242	0.29	-1.7
2,307,551	-		Synpcc7942_2242	0.30	-1.7
2,307,551	-		Synpcc7942_2242	0.30	-1.7
2,307,562	+				-1.1
2,307,574	-		Synpcc7942_2242	0.32	-0.1
2,307,589	+		Synpcc7942_2242	0.34	-0.1
2,307,600	-		Synpcc7942_2242	0.35	-1.7
2,307,602	-				-0.1
2,307,616	+		Synpcc7942_2242	0.36	+1.1
2,307,631	-				-0.1
2,307,653	+		Synpcc7942_2242	0.40	-1.1
2,307,661	-		Synpcc7942_2242	0.41	-0.1
2,307,663	-		Synpcc7942_2242	0.41	-0.1
2,307,665	+		Synpcc7942_2242	0.41	-0.1
2,307,673	-		Synpcc7942_2242	0.42	-3.1
2,307,673	-		Synpcc7942_2242	0.42	-3.1
2,307,673	-		Synpcc7942_2242	0.42	-0.1
2,307,720	+		Synpcc7942_2242	0.47	-1.7
2,307,779	+		Synpcc7942_2242	0.53	-0.1
2,307,779	+		Synpcc7942_2242	0.53	-1.7
2,307,784	+		Synpcc7942_2242	0.53	-2.1
2,307,784	+		Synpcc7942_2242	0.53	-0.1
2,307,787	-				-1.1
2,307,787	-		Synpcc7942_2242	0.54	-1.7
2,307,787	-		Synpcc7942_2242	0.54	-0.1
2,307,820	+		Synpcc7942_2242	0.57	-1.0
2,307,843	-		Synpcc7942_2242	0.59	-1.1
2,307,843	-		Synpcc7942_2242	0.59	-0.1
2,307,843	-		Synpcc7942_2242	0.59	-1.7
2,307,857	-		Synpcc7942_2242	0.61	-0.1
2,307,958	+		Synpcc7942_2242	0.71	+1.8
2,307,966	-		Synpcc7942_2242	0.72	-0.1
2,307,976	-		Synpcc7942_2242	0.73	-1.1
2,307,976	-		Synpcc7942_2242	0.73	-1.1
2,307,985	-		Synpcc7942_2242	0.74	-3.7
2,308,023	+		Synpcc7942_2242	0.77	-0.1
2,308,031	-				-0.1
2,308,046	+		Synpcc7942_2242	0.80	-2.5
2,308,080	-		Synpcc7942_2242	0.83	-2.1
2,308,115	+		Synpcc7942_2242	0.87	-0.1
2,308,159	+				+2.6
2,308,168	+				-3.0
2,308,168	+				-3.0
2,308,267	-				-4.4
2,308,319	+				-1.1
2,308,319	+				+2.2
2,308,350	-				-0.1
2,308,350	-				+0.2
2,308,382	+	proA	Synpcc7942_2243	0.10	-1.7
2,308,400	+	proA	Synpcc7942_2243	0.12	+1.6
2,308,408	+	proA	Synpcc7942_2243	0.12	+1.0
2,308,418	+	proA	Synpcc7942_2243	0.13	-1.1
2,308,443	-	proA	Synpcc7942_2243	0.15	+2.8
2,308,455	-	proA	Synpcc7942_2243	0.16	+2.1
2,308,534	+	proA	Synpcc7942_2243	0.23	-1.7
2,308,541	-	proA	Synpcc7942_2243	0.23	-2.1
2,308,629	+	proA	Synpcc7942_2243	0.30	+1.1
2,308,657	+	proA	Synpcc7942_2243	0.32	+2.9
2,308,664	-	proA	Synpcc7942_2243	0.33	+1.4
2,308,679	-	proA	Synpcc7942_2243	0.34	-0.6
2,308,687	+	proA	Synpcc7942_2243	0.35	-1.1
2,308,711	-	proA	Synpcc7942_2243	0.37	+2.6
2,308,739	-	proA	Synpcc7942_2243	0.39	+3.7
2,308,776	+	proA	Synpcc7942_2243	0.42	+3.2
2,308,776	+	proA	Synpcc7942_2243	0.42	+3.3
2,308,786	-	proA	Synpcc7942_2243	0.43	+2.9
2,308,797	+	proA	Synpcc7942_2243	0.44	-1.1
2,308,797	+	proA	Synpcc7942_2243	0.44	-2.7
2,308,814	-	proA	Synpcc7942_2243	0.45	+3.4
2,308,829	-	proA	Synpcc7942_2243	0.46	-0.1
2,308,834	+	proA	Synpcc7942_2243	0.47	+1.5
2,308,845	+	proA	Synpcc7942_2243	0.48	+4.0
2,308,853	-	proA	Synpcc7942_2243	0.48	-0.1
2,308,920	-	proA	Synpcc7942_2243	0.54	-0.1
2,308,937	+	proA	Synpcc7942_2243	0.55	+0.9
2,308,955	-	proA	Synpcc7942_2243	0.56	+1.4
2,308,956	-	proA	Synpcc7942_2243	0.56	+3.2
2,308,967	+	proA	Synpcc7942_2243	0.57	-1.7
2,309,005	+	proA	Synpcc7942_2243	0.60	-1.7
2,309,047	+	proA	Synpcc7942_2243	0.64	-1.1
2,309,066	-	proA	Synpcc7942_2243	0.65	+3.5
2,309,125	-	proA	Synpcc7942_2243	0.70	-1.7
2,309,143	-	proA	Synpcc7942_2243	0.71	-3.0
2,309,157	+	proA	Synpcc7942_2243	0.73	-1.1
2,309,157	+	proA	Synpcc7942_2243	0.73	-3.5
2,309,157	-	proA	Synpcc7942_2243	0.73	+1.4
2,309,163	+	proA	Synpcc7942_2243	0.73	+3.6
2,309,165	-	proA	Synpcc7942_2243	0.73	-2.1
2,309,177	-	proA	Synpcc7942_2243	0.74	-0.1
2,309,236	+	proA	Synpcc7942_2243	0.79	-4.3
2,309,287	+	proA	Synpcc7942_2243	0.83	-1.7
2,309,287	+	proA	Synpcc7942_2243	0.83	-0.1
2,309,295	-	proA	Synpcc7942_2243	0.84	+0.9
2,309,295	-	proA	Synpcc7942_2243	0.84	+1.9
2,309,320	+	proA	Synpcc7942_2243	0.86	+2.6
2,309,337	+	proA	Synpcc7942_2243	0.87	-0.1
2,309,387	+				-1.1
2,309,395	-				-1.1
2,309,399	+				+1.4
2,309,407	+				+2.7
2,309,427	+				-0.1
2,309,428	+				-4.7
2,309,434	-				+3.4
2,309,436	-				+3.6
2,309,457	+				+2.0
2,309,557	+				+0.9
2,309,565	-				-0.1
2,309,569	+				-2.0
2,309,574	+				-1.7
2,309,577	-				+3.1
2,309,577	-				+5.4
2,309,584	-				+3.3
2,310,389	+	psbZ	Synpcc7942_2245	0.24	-1.2
2,310,497	+	psbZ	Synpcc7942_2245	0.81	+0.2