Experiment: Cisplatin 0.00625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt gor and Synpcc7942_0843 are separated by 98 nucleotides Synpcc7942_0843 and Synpcc7942_0844 are separated by 163 nucleotides Synpcc7942_0844 and Synpcc7942_0845 are separated by 63 nucleotides
Synpcc7942_0842: gor - glutathione reductase, at 837,065 to 838,405
gor
Synpcc7942_0843: Synpcc7942_0843 - hypothetical protein, at 838,504 to 838,935
_0843
Synpcc7942_0844: Synpcc7942_0844 - Phosphoesterase PHP-like, at 839,099 to 839,809
_0844
Synpcc7942_0845: Synpcc7942_0845 - hypothetical protein, at 839,873 to 840,079
_0845
Position (kb) 838
839 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3
4
5 at 837.514 kb on - strand, within gor at 837.535 kb on - strand, within gor at 837.540 kb on - strand, within gor at 837.557 kb on - strand, within gor at 837.589 kb on - strand, within gor at 837.591 kb on - strand, within gor at 837.626 kb on + strand, within gor at 837.641 kb on - strand, within gor at 837.672 kb on + strand, within gor at 837.677 kb on + strand, within gor at 837.678 kb on - strand, within gor at 837.720 kb on - strand, within gor at 837.742 kb on - strand, within gor at 837.744 kb on - strand, within gor at 837.744 kb on - strand, within gor at 837.751 kb on + strand, within gor at 837.754 kb on - strand, within gor at 837.781 kb on - strand, within gor at 837.787 kb on + strand, within gor at 837.787 kb on + strand, within gor at 837.789 kb on - strand, within gor at 837.832 kb on + strand, within gor at 837.838 kb on + strand, within gor at 837.846 kb on - strand, within gor at 837.856 kb on - strand, within gor at 837.885 kb on + strand, within gor at 837.887 kb on + strand, within gor at 837.887 kb on + strand, within gor at 837.895 kb on - strand, within gor at 837.902 kb on + strand, within gor at 837.922 kb on + strand, within gor at 838.036 kb on + strand, within gor at 838.181 kb on - strand, within gor at 838.189 kb on - strand, within gor at 838.203 kb on - strand, within gor at 838.204 kb on - strand, within gor at 838.204 kb on - strand, within gor at 838.238 kb on + strand, within gor at 838.256 kb on + strand, within gor at 838.414 kb on + strand at 838.415 kb on - strand at 838.450 kb on + strand at 838.473 kb on + strand at 838.473 kb on + strand at 838.475 kb on - strand at 838.482 kb on + strand at 838.485 kb on - strand at 838.485 kb on - strand at 838.539 kb on + strand at 838.540 kb on + strand at 838.542 kb on - strand at 838.633 kb on - strand, within Synpcc7942_0843 at 838.633 kb on - strand, within Synpcc7942_0843 at 838.648 kb on + strand, within Synpcc7942_0843 at 838.651 kb on - strand, within Synpcc7942_0843 at 838.656 kb on - strand, within Synpcc7942_0843 at 838.656 kb on - strand, within Synpcc7942_0843 at 838.666 kb on + strand at 838.676 kb on + strand, within Synpcc7942_0843 at 838.676 kb on + strand, within Synpcc7942_0843 at 838.684 kb on - strand, within Synpcc7942_0843 at 838.684 kb on - strand, within Synpcc7942_0843 at 838.687 kb on + strand, within Synpcc7942_0843 at 838.695 kb on - strand, within Synpcc7942_0843 at 838.717 kb on - strand, within Synpcc7942_0843 at 838.757 kb on - strand, within Synpcc7942_0843 at 838.757 kb on - strand, within Synpcc7942_0843 at 838.757 kb on - strand, within Synpcc7942_0843 at 838.785 kb on - strand, within Synpcc7942_0843 at 838.797 kb on - strand, within Synpcc7942_0843 at 838.833 kb on - strand, within Synpcc7942_0843 at 838.848 kb on + strand, within Synpcc7942_0843 at 838.863 kb on - strand, within Synpcc7942_0843 at 838.895 kb on - strand at 838.985 kb on + strand at 838.996 kb on + strand at 839.002 kb on - strand at 839.005 kb on + strand at 839.005 kb on + strand at 839.026 kb on - strand at 839.028 kb on + strand at 839.084 kb on - strand at 839.094 kb on - strand at 839.124 kb on - strand at 839.194 kb on + strand, within Synpcc7942_0844 at 839.194 kb on + strand, within Synpcc7942_0844 at 839.202 kb on - strand, within Synpcc7942_0844 at 839.202 kb on - strand, within Synpcc7942_0844 at 839.202 kb on - strand, within Synpcc7942_0844 at 839.222 kb on - strand, within Synpcc7942_0844 at 839.222 kb on - strand, within Synpcc7942_0844 at 839.222 kb on - strand, within Synpcc7942_0844 at 839.222 kb on - strand, within Synpcc7942_0844 at 839.248 kb on - strand, within Synpcc7942_0844 at 839.252 kb on + strand, within Synpcc7942_0844 at 839.309 kb on + strand, within Synpcc7942_0844 at 839.340 kb on - strand, within Synpcc7942_0844 at 839.341 kb on - strand, within Synpcc7942_0844 at 839.341 kb on - strand, within Synpcc7942_0844 at 839.400 kb on - strand, within Synpcc7942_0844 at 839.401 kb on + strand at 839.401 kb on + strand, within Synpcc7942_0844 at 839.406 kb on + strand, within Synpcc7942_0844 at 839.409 kb on - strand, within Synpcc7942_0844 at 839.414 kb on - strand at 839.414 kb on - strand, within Synpcc7942_0844 at 839.453 kb on + strand, within Synpcc7942_0844 at 839.468 kb on + strand, within Synpcc7942_0844 at 839.470 kb on + strand, within Synpcc7942_0844 at 839.481 kb on + strand, within Synpcc7942_0844 at 839.499 kb on + strand, within Synpcc7942_0844 at 839.504 kb on + strand, within Synpcc7942_0844 at 839.514 kb on - strand, within Synpcc7942_0844 at 839.518 kb on - strand, within Synpcc7942_0844 at 839.576 kb on + strand, within Synpcc7942_0844 at 839.584 kb on - strand, within Synpcc7942_0844 at 839.602 kb on + strand, within Synpcc7942_0844 at 839.620 kb on - strand, within Synpcc7942_0844 at 839.630 kb on + strand, within Synpcc7942_0844 at 839.644 kb on + strand, within Synpcc7942_0844 at 839.654 kb on - strand, within Synpcc7942_0844 at 839.679 kb on + strand, within Synpcc7942_0844 at 839.747 kb on - strand at 839.747 kb on - strand at 839.815 kb on + strand at 839.823 kb on - strand at 839.830 kb on + strand at 839.830 kb on + strand at 839.830 kb on + strand at 839.838 kb on - strand at 839.838 kb on - strand at 839.856 kb on - strand at 839.870 kb on + strand at 839.870 kb on + strand at 839.870 kb on + strand at 839.878 kb on - strand at 839.878 kb on - strand at 839.888 kb on - strand at 839.888 kb on - strand at 839.900 kb on + strand, within Synpcc7942_0845 at 839.924 kb on - strand, within Synpcc7942_0845
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.00625 mg/ml remove 837,514 - gor Synpcc7942_0842 0.33 -3.4 837,535 - gor Synpcc7942_0842 0.35 -0.2 837,540 - gor Synpcc7942_0842 0.35 -1.8 837,557 - gor Synpcc7942_0842 0.37 -2.6 837,589 - gor Synpcc7942_0842 0.39 +1.4 837,591 - gor Synpcc7942_0842 0.39 -1.8 837,626 + gor Synpcc7942_0842 0.42 -1.2 837,641 - gor Synpcc7942_0842 0.43 -1.8 837,672 + gor Synpcc7942_0842 0.45 -1.2 837,677 + gor Synpcc7942_0842 0.46 -1.2 837,678 - gor Synpcc7942_0842 0.46 -0.2 837,720 - gor Synpcc7942_0842 0.49 -1.2 837,742 - gor Synpcc7942_0842 0.50 -1.8 837,744 - gor Synpcc7942_0842 0.51 -2.2 837,744 - gor Synpcc7942_0842 0.51 +0.5 837,751 + gor Synpcc7942_0842 0.51 -1.2 837,754 - gor Synpcc7942_0842 0.51 +0.8 837,781 - gor Synpcc7942_0842 0.53 -1.2 837,787 + gor Synpcc7942_0842 0.54 -1.8 837,787 + gor Synpcc7942_0842 0.54 +1.9 837,789 - gor Synpcc7942_0842 0.54 -2.8 837,832 + gor Synpcc7942_0842 0.57 -1.8 837,838 + gor Synpcc7942_0842 0.58 -1.2 837,846 - gor Synpcc7942_0842 0.58 -1.8 837,856 - gor Synpcc7942_0842 0.59 -0.2 837,885 + gor Synpcc7942_0842 0.61 -1.8 837,887 + gor Synpcc7942_0842 0.61 -1.8 837,887 + gor Synpcc7942_0842 0.61 -3.4 837,895 - gor Synpcc7942_0842 0.62 -0.2 837,902 + gor Synpcc7942_0842 0.62 +0.4 837,922 + gor Synpcc7942_0842 0.64 -1.2 838,036 + gor Synpcc7942_0842 0.72 +2.0 838,181 - gor Synpcc7942_0842 0.83 +2.1 838,189 - gor Synpcc7942_0842 0.84 -1.2 838,203 - gor Synpcc7942_0842 0.85 -1.8 838,204 - gor Synpcc7942_0842 0.85 -1.8 838,204 - gor Synpcc7942_0842 0.85 +1.0 838,238 + gor Synpcc7942_0842 0.87 -1.8 838,256 + gor Synpcc7942_0842 0.89 -1.2 838,414 + +2.5 838,415 - +2.1 838,450 + -1.2 838,473 + -1.2 838,473 + +0.1 838,475 - -0.2 838,482 + -2.2 838,485 - -1.2 838,485 - +3.0 838,539 + -2.2 838,540 + -0.2 838,542 - -1.2 838,633 - Synpcc7942_0843 0.30 -0.2 838,633 - Synpcc7942_0843 0.30 -0.2 838,648 + Synpcc7942_0843 0.33 +0.3 838,651 - Synpcc7942_0843 0.34 -0.2 838,656 - Synpcc7942_0843 0.35 -0.2 838,656 - Synpcc7942_0843 0.35 -0.2 838,666 + -1.2 838,676 + Synpcc7942_0843 0.40 +2.6 838,676 + Synpcc7942_0843 0.40 -1.2 838,684 - Synpcc7942_0843 0.42 -2.8 838,684 - Synpcc7942_0843 0.42 -0.2 838,687 + Synpcc7942_0843 0.42 -1.2 838,695 - Synpcc7942_0843 0.44 -1.2 838,717 - Synpcc7942_0843 0.49 -2.6 838,757 - Synpcc7942_0843 0.59 +4.5 838,757 - Synpcc7942_0843 0.59 -1.2 838,757 - Synpcc7942_0843 0.59 -2.6 838,785 - Synpcc7942_0843 0.65 -1.8 838,797 - Synpcc7942_0843 0.68 -3.0 838,833 - Synpcc7942_0843 0.76 -1.6 838,848 + Synpcc7942_0843 0.80 -2.4 838,863 - Synpcc7942_0843 0.83 -0.2 838,895 - +0.8 838,985 + -2.2 838,996 + +3.5 839,002 - -1.8 839,005 + +2.6 839,005 + +0.1 839,026 - -0.6 839,028 + -2.2 839,084 - -1.2 839,094 - -3.6 839,124 - -1.2 839,194 + Synpcc7942_0844 0.13 -1.8 839,194 + Synpcc7942_0844 0.13 +3.1 839,202 - Synpcc7942_0844 0.14 +3.9 839,202 - Synpcc7942_0844 0.14 +1.4 839,202 - Synpcc7942_0844 0.14 +4.8 839,222 - Synpcc7942_0844 0.17 -0.2 839,222 - Synpcc7942_0844 0.17 +1.4 839,222 - Synpcc7942_0844 0.17 -1.2 839,222 - Synpcc7942_0844 0.17 -6.0 839,248 - Synpcc7942_0844 0.21 -0.2 839,252 + Synpcc7942_0844 0.22 +2.1 839,309 + Synpcc7942_0844 0.30 +3.4 839,340 - Synpcc7942_0844 0.34 +0.4 839,341 - Synpcc7942_0844 0.34 -2.2 839,341 - Synpcc7942_0844 0.34 -0.2 839,400 - Synpcc7942_0844 0.42 -0.2 839,401 + -1.2 839,401 + Synpcc7942_0844 0.42 -4.3 839,406 + Synpcc7942_0844 0.43 +1.6 839,409 - Synpcc7942_0844 0.44 +0.6 839,414 - +4.4 839,414 - Synpcc7942_0844 0.44 -1.2 839,453 + Synpcc7942_0844 0.50 -1.2 839,468 + Synpcc7942_0844 0.52 -1.2 839,470 + Synpcc7942_0844 0.52 -0.8 839,481 + Synpcc7942_0844 0.54 +1.8 839,499 + Synpcc7942_0844 0.56 -0.2 839,504 + Synpcc7942_0844 0.57 -1.2 839,514 - Synpcc7942_0844 0.58 -0.2 839,518 - Synpcc7942_0844 0.59 +1.9 839,576 + Synpcc7942_0844 0.67 -2.7 839,584 - Synpcc7942_0844 0.68 -2.2 839,602 + Synpcc7942_0844 0.71 -0.2 839,620 - Synpcc7942_0844 0.73 -1.8 839,630 + Synpcc7942_0844 0.75 +0.8 839,644 + Synpcc7942_0844 0.77 -1.8 839,654 - Synpcc7942_0844 0.78 -2.8 839,679 + Synpcc7942_0844 0.82 +4.0 839,747 - +0.7 839,747 - -1.2 839,815 + -1.2 839,823 - +1.7 839,830 + -1.2 839,830 + -1.2 839,830 + -0.2 839,838 - -1.2 839,838 - -1.2 839,856 - -1.2 839,870 + +3.3 839,870 + -2.6 839,870 + -2.2 839,878 - +2.1 839,878 - +1.2 839,888 - -1.2 839,888 - +2.7 839,900 + Synpcc7942_0845 0.13 -1.8 839,924 - Synpcc7942_0845 0.25 +4.1
Or see this region's nucleotide sequence