Experiment: Cisplatin 0.00625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt nha1 and Synpcc7942_0812 are separated by 123 nucleotides Synpcc7942_0812 and hisS are separated by 25 nucleotides
Synpcc7942_0811: nha1 - Na+/H+ antiporter, at 805,186 to 806,769
nha1
Synpcc7942_0812: Synpcc7942_0812 - Heat shock protein DnaJ-like, at 806,893 to 807,813
_0812
Synpcc7942_0813: hisS - ATP phosphoribosyltransferase regulatory subunit, at 807,839 to 809,101
hisS
Position (kb) 806
807
808 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 805.898 kb on + strand, within nha1 at 805.901 kb on + strand, within nha1 at 805.936 kb on - strand, within nha1 at 806.006 kb on + strand, within nha1 at 806.015 kb on + strand, within nha1 at 806.025 kb on + strand, within nha1 at 806.078 kb on + strand, within nha1 at 806.086 kb on - strand, within nha1 at 806.089 kb on + strand, within nha1 at 806.089 kb on + strand, within nha1 at 806.089 kb on + strand, within nha1 at 806.097 kb on - strand, within nha1 at 806.097 kb on - strand, within nha1 at 806.097 kb on - strand, within nha1 at 806.097 kb on - strand, within nha1 at 806.099 kb on + strand, within nha1 at 806.099 kb on + strand, within nha1 at 806.099 kb on - strand, within nha1 at 806.107 kb on - strand, within nha1 at 806.111 kb on + strand, within nha1 at 806.111 kb on + strand, within nha1 at 806.111 kb on + strand, within nha1 at 806.119 kb on - strand, within nha1 at 806.121 kb on - strand, within nha1 at 806.126 kb on + strand, within nha1 at 806.152 kb on + strand, within nha1 at 806.161 kb on + strand, within nha1 at 806.169 kb on - strand, within nha1 at 806.169 kb on - strand, within nha1 at 806.176 kb on - strand, within nha1 at 806.181 kb on - strand, within nha1 at 806.214 kb on + strand, within nha1 at 806.235 kb on + strand, within nha1 at 806.238 kb on - strand, within nha1 at 806.263 kb on + strand at 806.270 kb on - strand, within nha1 at 806.273 kb on + strand, within nha1 at 806.273 kb on + strand, within nha1 at 806.281 kb on - strand, within nha1 at 806.281 kb on - strand, within nha1 at 806.281 kb on - strand, within nha1 at 806.281 kb on - strand, within nha1 at 806.281 kb on - strand, within nha1 at 806.288 kb on + strand, within nha1 at 806.291 kb on - strand, within nha1 at 806.296 kb on + strand, within nha1 at 806.304 kb on - strand, within nha1 at 806.331 kb on + strand, within nha1 at 806.331 kb on + strand, within nha1 at 806.341 kb on + strand, within nha1 at 806.343 kb on + strand, within nha1 at 806.344 kb on + strand, within nha1 at 806.346 kb on + strand, within nha1 at 806.349 kb on - strand, within nha1 at 806.349 kb on - strand, within nha1 at 806.353 kb on + strand, within nha1 at 806.361 kb on - strand, within nha1 at 806.368 kb on - strand, within nha1 at 806.378 kb on + strand, within nha1 at 806.378 kb on + strand, within nha1 at 806.385 kb on + strand, within nha1 at 806.387 kb on + strand, within nha1 at 806.388 kb on - strand, within nha1 at 806.393 kb on - strand, within nha1 at 806.398 kb on + strand, within nha1 at 806.399 kb on + strand, within nha1 at 806.400 kb on - strand, within nha1 at 806.400 kb on - strand, within nha1 at 806.416 kb on + strand, within nha1 at 806.419 kb on - strand, within nha1 at 806.440 kb on - strand, within nha1 at 806.458 kb on + strand, within nha1 at 806.466 kb on - strand, within nha1 at 806.466 kb on - strand, within nha1 at 806.466 kb on - strand, within nha1 at 806.466 kb on - strand, within nha1 at 806.480 kb on + strand, within nha1 at 806.480 kb on + strand, within nha1 at 806.485 kb on + strand, within nha1 at 806.488 kb on - strand, within nha1 at 806.488 kb on - strand, within nha1 at 806.488 kb on - strand, within nha1 at 806.488 kb on - strand, within nha1 at 806.488 kb on - strand, within nha1 at 806.488 kb on - strand, within nha1 at 806.493 kb on - strand, within nha1 at 806.520 kb on + strand, within nha1 at 806.552 kb on - strand, within nha1 at 806.556 kb on + strand at 806.564 kb on - strand, within nha1 at 806.564 kb on - strand, within nha1 at 806.567 kb on - strand, within nha1 at 806.572 kb on - strand, within nha1 at 806.584 kb on - strand, within nha1 at 806.589 kb on - strand, within nha1 at 806.631 kb on - strand at 806.652 kb on - strand at 806.652 kb on - strand at 806.684 kb on + strand at 806.689 kb on + strand at 806.692 kb on - strand at 806.719 kb on - strand at 806.733 kb on + strand at 806.733 kb on + strand at 806.743 kb on + strand at 806.803 kb on + strand at 806.803 kb on + strand at 806.806 kb on + strand at 806.808 kb on + strand at 806.816 kb on - strand at 806.818 kb on + strand at 806.821 kb on - strand at 806.821 kb on - strand at 806.827 kb on + strand at 806.830 kb on + strand at 806.855 kb on - strand at 806.896 kb on - strand at 806.927 kb on - strand at 806.927 kb on - strand at 806.927 kb on - strand at 806.951 kb on - strand at 806.961 kb on - strand at 806.973 kb on + strand at 807.021 kb on + strand, within Synpcc7942_0812 at 807.021 kb on + strand, within Synpcc7942_0812 at 807.021 kb on + strand, within Synpcc7942_0812 at 807.028 kb on - strand, within Synpcc7942_0812 at 807.029 kb on - strand, within Synpcc7942_0812 at 807.068 kb on + strand, within Synpcc7942_0812 at 807.075 kb on - strand, within Synpcc7942_0812 at 807.134 kb on + strand, within Synpcc7942_0812 at 807.213 kb on - strand, within Synpcc7942_0812 at 807.217 kb on + strand, within Synpcc7942_0812 at 807.217 kb on + strand, within Synpcc7942_0812 at 807.268 kb on + strand, within Synpcc7942_0812 at 807.291 kb on + strand, within Synpcc7942_0812 at 807.294 kb on - strand, within Synpcc7942_0812 at 807.299 kb on - strand, within Synpcc7942_0812 at 807.319 kb on + strand, within Synpcc7942_0812 at 807.323 kb on + strand at 807.337 kb on + strand, within Synpcc7942_0812 at 807.352 kb on - strand, within Synpcc7942_0812 at 807.355 kb on + strand at 807.360 kb on + strand, within Synpcc7942_0812 at 807.373 kb on - strand, within Synpcc7942_0812 at 807.383 kb on - strand, within Synpcc7942_0812 at 807.398 kb on + strand, within Synpcc7942_0812 at 807.399 kb on + strand, within Synpcc7942_0812 at 807.399 kb on + strand, within Synpcc7942_0812 at 807.399 kb on + strand, within Synpcc7942_0812 at 807.404 kb on + strand, within Synpcc7942_0812 at 807.406 kb on - strand at 807.406 kb on - strand, within Synpcc7942_0812 at 807.407 kb on - strand, within Synpcc7942_0812 at 807.410 kb on + strand, within Synpcc7942_0812 at 807.416 kb on - strand, within Synpcc7942_0812 at 807.418 kb on - strand at 807.433 kb on + strand, within Synpcc7942_0812 at 807.439 kb on + strand, within Synpcc7942_0812 at 807.477 kb on + strand, within Synpcc7942_0812 at 807.482 kb on + strand, within Synpcc7942_0812 at 807.485 kb on - strand, within Synpcc7942_0812 at 807.490 kb on - strand, within Synpcc7942_0812 at 807.500 kb on - strand, within Synpcc7942_0812 at 807.512 kb on + strand, within Synpcc7942_0812 at 807.512 kb on + strand, within Synpcc7942_0812 at 807.512 kb on + strand, within Synpcc7942_0812 at 807.514 kb on + strand, within Synpcc7942_0812 at 807.522 kb on + strand, within Synpcc7942_0812 at 807.522 kb on - strand at 807.561 kb on + strand, within Synpcc7942_0812 at 807.602 kb on + strand, within Synpcc7942_0812 at 807.607 kb on + strand, within Synpcc7942_0812 at 807.610 kb on + strand, within Synpcc7942_0812 at 807.610 kb on - strand, within Synpcc7942_0812 at 807.738 kb on + strand at 807.746 kb on - strand at 807.746 kb on - strand at 807.746 kb on - strand at 807.746 kb on - strand at 807.770 kb on - strand at 807.770 kb on - strand at 807.773 kb on + strand at 807.773 kb on + strand at 807.781 kb on - strand at 807.781 kb on - strand at 807.791 kb on - strand at 807.804 kb on + strand at 807.827 kb on - strand at 807.829 kb on + strand at 807.837 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.00625 mg/ml remove 805,898 + nha1 Synpcc7942_0811 0.45 +2.7 805,901 + nha1 Synpcc7942_0811 0.45 +2.1 805,936 - nha1 Synpcc7942_0811 0.47 -1.2 806,006 + nha1 Synpcc7942_0811 0.52 -0.2 806,015 + nha1 Synpcc7942_0811 0.52 -2.2 806,025 + nha1 Synpcc7942_0811 0.53 +1.8 806,078 + nha1 Synpcc7942_0811 0.56 +0.7 806,086 - nha1 Synpcc7942_0811 0.57 +0.3 806,089 + nha1 Synpcc7942_0811 0.57 -1.2 806,089 + nha1 Synpcc7942_0811 0.57 +2.3 806,089 + nha1 Synpcc7942_0811 0.57 -0.6 806,097 - nha1 Synpcc7942_0811 0.58 +0.9 806,097 - nha1 Synpcc7942_0811 0.58 +0.9 806,097 - nha1 Synpcc7942_0811 0.58 +0.0 806,097 - nha1 Synpcc7942_0811 0.58 +0.8 806,099 + nha1 Synpcc7942_0811 0.58 -0.8 806,099 + nha1 Synpcc7942_0811 0.58 +1.8 806,099 - nha1 Synpcc7942_0811 0.58 +3.9 806,107 - nha1 Synpcc7942_0811 0.58 +2.3 806,111 + nha1 Synpcc7942_0811 0.58 -0.2 806,111 + nha1 Synpcc7942_0811 0.58 +0.8 806,111 + nha1 Synpcc7942_0811 0.58 -2.2 806,119 - nha1 Synpcc7942_0811 0.59 +2.7 806,121 - nha1 Synpcc7942_0811 0.59 -0.2 806,126 + nha1 Synpcc7942_0811 0.59 -0.2 806,152 + nha1 Synpcc7942_0811 0.61 -1.8 806,161 + nha1 Synpcc7942_0811 0.62 +0.8 806,169 - nha1 Synpcc7942_0811 0.62 +2.7 806,169 - nha1 Synpcc7942_0811 0.62 -0.6 806,176 - nha1 Synpcc7942_0811 0.62 +0.1 806,181 - nha1 Synpcc7942_0811 0.63 +1.2 806,214 + nha1 Synpcc7942_0811 0.65 +1.7 806,235 + nha1 Synpcc7942_0811 0.66 -1.8 806,238 - nha1 Synpcc7942_0811 0.66 -0.2 806,263 + -0.2 806,270 - nha1 Synpcc7942_0811 0.68 -1.2 806,273 + nha1 Synpcc7942_0811 0.69 -1.8 806,273 + nha1 Synpcc7942_0811 0.69 +3.6 806,281 - nha1 Synpcc7942_0811 0.69 +2.5 806,281 - nha1 Synpcc7942_0811 0.69 -1.2 806,281 - nha1 Synpcc7942_0811 0.69 -1.8 806,281 - nha1 Synpcc7942_0811 0.69 -0.8 806,281 - nha1 Synpcc7942_0811 0.69 +4.5 806,288 + nha1 Synpcc7942_0811 0.70 +1.5 806,291 - nha1 Synpcc7942_0811 0.70 +1.6 806,296 + nha1 Synpcc7942_0811 0.70 +0.8 806,304 - nha1 Synpcc7942_0811 0.71 +2.6 806,331 + nha1 Synpcc7942_0811 0.72 -0.8 806,331 + nha1 Synpcc7942_0811 0.72 -0.6 806,341 + nha1 Synpcc7942_0811 0.73 +3.8 806,343 + nha1 Synpcc7942_0811 0.73 +1.2 806,344 + nha1 Synpcc7942_0811 0.73 -1.8 806,346 + nha1 Synpcc7942_0811 0.73 -3.0 806,349 - nha1 Synpcc7942_0811 0.73 -1.2 806,349 - nha1 Synpcc7942_0811 0.73 -2.2 806,353 + nha1 Synpcc7942_0811 0.74 -0.2 806,361 - nha1 Synpcc7942_0811 0.74 +2.4 806,368 - nha1 Synpcc7942_0811 0.75 -2.8 806,378 + nha1 Synpcc7942_0811 0.75 -3.0 806,378 + nha1 Synpcc7942_0811 0.75 -0.2 806,385 + nha1 Synpcc7942_0811 0.76 +3.6 806,387 + nha1 Synpcc7942_0811 0.76 +0.5 806,388 - nha1 Synpcc7942_0811 0.76 -1.2 806,393 - nha1 Synpcc7942_0811 0.76 +0.3 806,398 + nha1 Synpcc7942_0811 0.77 -1.2 806,399 + nha1 Synpcc7942_0811 0.77 -1.2 806,400 - nha1 Synpcc7942_0811 0.77 +3.3 806,400 - nha1 Synpcc7942_0811 0.77 +0.8 806,416 + nha1 Synpcc7942_0811 0.78 +2.8 806,419 - nha1 Synpcc7942_0811 0.78 -3.0 806,440 - nha1 Synpcc7942_0811 0.79 -3.2 806,458 + nha1 Synpcc7942_0811 0.80 +1.5 806,466 - nha1 Synpcc7942_0811 0.81 +2.0 806,466 - nha1 Synpcc7942_0811 0.81 -0.4 806,466 - nha1 Synpcc7942_0811 0.81 -1.2 806,466 - nha1 Synpcc7942_0811 0.81 +2.8 806,480 + nha1 Synpcc7942_0811 0.82 -1.2 806,480 + nha1 Synpcc7942_0811 0.82 -2.8 806,485 + nha1 Synpcc7942_0811 0.82 +3.4 806,488 - nha1 Synpcc7942_0811 0.82 -0.8 806,488 - nha1 Synpcc7942_0811 0.82 +1.7 806,488 - nha1 Synpcc7942_0811 0.82 +1.4 806,488 - nha1 Synpcc7942_0811 0.82 -0.2 806,488 - nha1 Synpcc7942_0811 0.82 -1.2 806,488 - nha1 Synpcc7942_0811 0.82 -0.4 806,493 - nha1 Synpcc7942_0811 0.83 -0.2 806,520 + nha1 Synpcc7942_0811 0.84 -0.2 806,552 - nha1 Synpcc7942_0811 0.86 +2.5 806,556 + -0.2 806,564 - nha1 Synpcc7942_0811 0.87 -0.2 806,564 - nha1 Synpcc7942_0811 0.87 +1.1 806,567 - nha1 Synpcc7942_0811 0.87 -1.8 806,572 - nha1 Synpcc7942_0811 0.88 +1.5 806,584 - nha1 Synpcc7942_0811 0.88 +0.4 806,589 - nha1 Synpcc7942_0811 0.89 -0.2 806,631 - -0.2 806,652 - -1.8 806,652 - -1.2 806,684 + -2.2 806,689 + -0.2 806,692 - +2.7 806,719 - +4.5 806,733 + -2.6 806,733 + -1.2 806,743 + +3.8 806,803 + +2.9 806,803 + -2.2 806,806 + -1.2 806,808 + -2.2 806,816 - -0.7 806,818 + +7.0 806,821 - -0.2 806,821 - -0.2 806,827 + -1.8 806,830 + +2.1 806,855 - +2.2 806,896 - +5.7 806,927 - -1.2 806,927 - -1.2 806,927 - -0.2 806,951 - +1.5 806,961 - -1.2 806,973 + -0.2 807,021 + Synpcc7942_0812 0.14 +1.8 807,021 + Synpcc7942_0812 0.14 +4.5 807,021 + Synpcc7942_0812 0.14 +2.2 807,028 - Synpcc7942_0812 0.15 -2.8 807,029 - Synpcc7942_0812 0.15 +3.5 807,068 + Synpcc7942_0812 0.19 -2.2 807,075 - Synpcc7942_0812 0.20 +4.4 807,134 + Synpcc7942_0812 0.26 -0.2 807,213 - Synpcc7942_0812 0.35 +3.2 807,217 + Synpcc7942_0812 0.35 -1.2 807,217 + Synpcc7942_0812 0.35 +2.4 807,268 + Synpcc7942_0812 0.41 +1.4 807,291 + Synpcc7942_0812 0.43 -1.2 807,294 - Synpcc7942_0812 0.44 -3.0 807,299 - Synpcc7942_0812 0.44 +0.8 807,319 + Synpcc7942_0812 0.46 +2.6 807,323 + -0.2 807,337 + Synpcc7942_0812 0.48 -0.2 807,352 - Synpcc7942_0812 0.50 +1.4 807,355 + -1.2 807,360 + Synpcc7942_0812 0.51 -1.2 807,373 - Synpcc7942_0812 0.52 -0.2 807,383 - Synpcc7942_0812 0.53 +2.2 807,398 + Synpcc7942_0812 0.55 -0.2 807,399 + Synpcc7942_0812 0.55 +0.8 807,399 + Synpcc7942_0812 0.55 -2.2 807,399 + Synpcc7942_0812 0.55 +3.8 807,404 + Synpcc7942_0812 0.55 +1.4 807,406 - +3.4 807,406 - Synpcc7942_0812 0.56 +4.2 807,407 - Synpcc7942_0812 0.56 -0.2 807,410 + Synpcc7942_0812 0.56 -0.2 807,416 - Synpcc7942_0812 0.57 +3.2 807,418 - +0.8 807,433 + Synpcc7942_0812 0.59 -0.2 807,439 + Synpcc7942_0812 0.59 -0.2 807,477 + Synpcc7942_0812 0.63 +3.7 807,482 + Synpcc7942_0812 0.64 +3.9 807,485 - Synpcc7942_0812 0.64 +1.4 807,490 - Synpcc7942_0812 0.65 -1.8 807,500 - Synpcc7942_0812 0.66 +2.5 807,512 + Synpcc7942_0812 0.67 +2.4 807,512 + Synpcc7942_0812 0.67 +3.3 807,512 + Synpcc7942_0812 0.67 +2.1 807,514 + Synpcc7942_0812 0.67 +3.6 807,522 + Synpcc7942_0812 0.68 +4.0 807,522 - -1.2 807,561 + Synpcc7942_0812 0.73 +2.9 807,602 + Synpcc7942_0812 0.77 -1.8 807,607 + Synpcc7942_0812 0.78 -0.2 807,610 + Synpcc7942_0812 0.78 +0.5 807,610 - Synpcc7942_0812 0.78 +2.6 807,738 + +1.8 807,746 - +1.9 807,746 - +2.8 807,746 - -1.8 807,746 - +2.9 807,770 - -1.2 807,770 - +3.7 807,773 + +4.9 807,773 + +3.4 807,781 - +1.3 807,781 - -3.7 807,791 - +2.1 807,804 + -1.2 807,827 - -0.2 807,829 + +3.3 807,837 - +2.0
Or see this region's nucleotide sequence