Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0114

Experiment: Cisplatin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.00625 mg/ml
112,443	+	phr	Synpcc7942_0112	0.52	-0.2
112,451	-	phr	Synpcc7942_0112	0.53	-0.2
112,455	-	phr	Synpcc7942_0112	0.53	+3.6
112,456	-	phr	Synpcc7942_0112	0.53	-1.8
112,470	+	phr	Synpcc7942_0112	0.54	-1.8
112,470	+	phr	Synpcc7942_0112	0.54	+1.4
112,470	+	phr	Synpcc7942_0112	0.54	-0.2
112,473	-	phr	Synpcc7942_0112	0.54	+3.6
112,475	+	phr	Synpcc7942_0112	0.54	-0.2
112,481	+	phr	Synpcc7942_0112	0.55	-1.2
112,489	-	phr	Synpcc7942_0112	0.55	-1.8
112,494	+	phr	Synpcc7942_0112	0.56	+2.7
112,502	+	phr	Synpcc7942_0112	0.56	-0.2
112,512	+	phr	Synpcc7942_0112	0.57	+2.6
112,556	-	phr	Synpcc7942_0112	0.60	-3.2
112,575	+	phr	Synpcc7942_0112	0.61	-2.0
112,600	-	phr	Synpcc7942_0112	0.63	+3.4
112,640	+	phr	Synpcc7942_0112	0.66	+0.4
112,645	+	phr	Synpcc7942_0112	0.66	-0.2
112,645	+	phr	Synpcc7942_0112	0.66	+1.4
112,648	-	phr	Synpcc7942_0112	0.66	-1.8
112,652	+	phr	Synpcc7942_0112	0.66	-0.2
112,652	+	phr	Synpcc7942_0112	0.66	+3.0
112,652	+	phr	Synpcc7942_0112	0.66	-2.2
112,652	+	phr	Synpcc7942_0112	0.66	+3.7
112,652	+	phr	Synpcc7942_0112	0.66	-0.2
112,652	+	phr	Synpcc7942_0112	0.66	+3.6
112,653	-	phr	Synpcc7942_0112	0.66	-2.2
112,660	-	phr	Synpcc7942_0112	0.67	+5.9
112,660	-	phr	Synpcc7942_0112	0.67	-0.8
112,660	-	phr	Synpcc7942_0112	0.67	+3.1
112,660	-	phr	Synpcc7942_0112	0.67	+3.3
112,724	+	phr	Synpcc7942_0112	0.71	-0.2
112,762	+	phr	Synpcc7942_0112	0.74	+0.4
112,764	-	phr	Synpcc7942_0112	0.74	+2.0
112,776	-	phr	Synpcc7942_0112	0.75	-1.2
112,791	+	phr	Synpcc7942_0112	0.76	-1.2
112,811	-	phr	Synpcc7942_0112	0.77	-0.2
112,821	-	phr	Synpcc7942_0112	0.78	+1.8
112,821	-	phr	Synpcc7942_0112	0.78	-3.0
112,827	-	phr	Synpcc7942_0112	0.78	+3.8
112,859	-	phr	Synpcc7942_0112	0.81	-3.8
112,865	+	phr	Synpcc7942_0112	0.81	-0.2
112,889	-	phr	Synpcc7942_0112	0.83	+1.7
112,890	-	phr	Synpcc7942_0112	0.83	+2.8
112,927	+	phr	Synpcc7942_0112	0.85	-1.8
112,927	+	phr	Synpcc7942_0112	0.85	-1.2
112,944	-	phr	Synpcc7942_0112	0.86	-1.2
112,980	-	phr	Synpcc7942_0112	0.89	+4.4
112,987	-	phr	Synpcc7942_0112	0.89	-1.8
112,991	+	phr	Synpcc7942_0112	0.90	+2.3
112,991	+				-0.2
112,993	+	phr	Synpcc7942_0112	0.90	-1.8
112,999	-				+2.8
113,009	-				-1.8
113,009	-				+1.0
113,029	+				-2.2
113,042	-				-1.2
113,042	-				-1.2
113,052	+				+4.7
113,052	+				-1.2
113,074	+				+2.0
113,074	+				-1.2
113,074	+				+3.5
113,082	-				-3.0
113,082	-				+1.3
113,082	-				-0.2
113,084	+				+1.8
113,084	+				+2.2
113,103	-				-0.8
113,103	-				-3.4
113,116	+				-1.8
113,116	+				-2.5
113,117	+				-2.2
113,122	+				+4.4
113,124	-				-1.8
113,124	-				+1.3
113,124	-				-1.2
113,124	-				+3.4
113,130	-				-1.8
113,133	+				-1.8
113,141	-				+3.0
113,183	-				-0.2
113,265	-	petL	Synpcc7942_0113	0.74	-1.8
113,265	-	petL	Synpcc7942_0113	0.74	+0.0
113,267	+	petL	Synpcc7942_0113	0.76	-1.8
113,272	+	petL	Synpcc7942_0113	0.82	-1.2
113,282	+				+0.8
113,290	-				-1.8
113,290	-				-0.2
113,297	+				-2.2
113,297	+				-0.8
113,297	+				-0.2
113,305	-				-0.2
113,305	-				-2.8
113,305	-				+1.0
113,305	-				-1.8
113,345	-				+3.5
113,374	+		Synpcc7942_0114	0.13	-1.2
113,425	-		Synpcc7942_0114	0.26	-0.2
113,445	-		Synpcc7942_0114	0.32	-1.2
113,461	+		Synpcc7942_0114	0.36	+3.3
113,478	+		Synpcc7942_0114	0.41	-0.2
113,478	+				-1.2
113,486	-		Synpcc7942_0114	0.43	-2.5
113,486	-		Synpcc7942_0114	0.43	-1.2
113,530	-		Synpcc7942_0114	0.55	+2.1
113,530	-		Synpcc7942_0114	0.55	-1.2
113,530	-		Synpcc7942_0114	0.55	-0.2
113,535	-		Synpcc7942_0114	0.56	-0.2
113,535	-		Synpcc7942_0114	0.56	+2.7
113,590	+		Synpcc7942_0114	0.71	-1.2
113,598	-		Synpcc7942_0114	0.73	+3.1
113,617	+		Synpcc7942_0114	0.78	-0.2
113,620	-		Synpcc7942_0114	0.79	-2.5
113,649	+				-4.8
113,649	+				+3.0
113,657	-				+1.9
113,663	+				-1.2
113,663	+				-1.8
113,730	+		Synpcc7942_0115	0.19	+0.8
113,733	+		Synpcc7942_0115	0.20	+2.9
113,733	+		Synpcc7942_0115	0.20	+1.3
113,733	+		Synpcc7942_0115	0.20	+3.0
113,741	-		Synpcc7942_0115	0.21	+1.1
113,760	+		Synpcc7942_0115	0.25	-3.8
113,760	+		Synpcc7942_0115	0.25	-0.2
113,768	-		Synpcc7942_0115	0.27	+1.2
113,774	-		Synpcc7942_0115	0.28	+2.3
113,774	-		Synpcc7942_0115	0.28	-0.2
113,774	-		Synpcc7942_0115	0.28	-1.2
113,807	+		Synpcc7942_0115	0.34	+3.3
113,861	+		Synpcc7942_0115	0.45	-1.2
113,921	+		Synpcc7942_0115	0.56	-1.2
113,921	+		Synpcc7942_0115	0.56	-1.2
113,921	+		Synpcc7942_0115	0.56	+5.2
113,965	+		Synpcc7942_0115	0.65	-3.4
113,981	-		Synpcc7942_0115	0.68	-1.2
113,988	-		Synpcc7942_0115	0.69	+4.4
113,995	+		Synpcc7942_0115	0.71	+2.2
113,995	+		Synpcc7942_0115	0.71	-1.2
113,995	+		Synpcc7942_0115	0.71	-1.2
114,003	-		Synpcc7942_0115	0.72	-0.2
114,003	-		Synpcc7942_0115	0.72	-1.5
114,003	-		Synpcc7942_0115	0.72	-0.2
114,018	+		Synpcc7942_0115	0.75	-1.5
114,029	+		Synpcc7942_0115	0.77	+5.4
114,037	-		Synpcc7942_0115	0.79	+3.9
114,037	-		Synpcc7942_0115	0.79	+1.9
114,066	+		Synpcc7942_0115	0.84	+1.1
114,086	+		Synpcc7942_0115	0.88	+2.3
114,091	+		Synpcc7942_0115	0.89	-0.2
114,136	+				-1.8
114,141	+				-1.2
114,141	+				+3.2
114,156	+				-0.2
114,175	+				-1.8
114,176	+				-1.2
114,183	-				-2.5
114,261	+				-3.0
114,300	+				-0.2
114,348	-				+2.7
114,391	+				+3.2
114,393	-				-1.8
114,399	-	cscK	Synpcc7942_0116	0.10	-0.2
114,450	-	cscK	Synpcc7942_0116	0.15	+0.8
114,477	-	cscK	Synpcc7942_0116	0.18	+2.7
114,491	-	cscK	Synpcc7942_0116	0.20	+2.1
114,491	-	cscK	Synpcc7942_0116	0.20	-1.8
114,491	-	cscK	Synpcc7942_0116	0.20	+2.4
114,518	+	cscK	Synpcc7942_0116	0.22	+3.5
114,518	+	cscK	Synpcc7942_0116	0.22	+3.9
114,538	-	cscK	Synpcc7942_0116	0.25	+3.0
114,548	+	cscK	Synpcc7942_0116	0.26	+3.7
114,548	+	cscK	Synpcc7942_0116	0.26	-1.2
114,556	-	cscK	Synpcc7942_0116	0.26	-0.2
114,580	+	cscK	Synpcc7942_0116	0.29	+1.4
114,588	-	cscK	Synpcc7942_0116	0.30	-2.5
114,605	+	cscK	Synpcc7942_0116	0.31	-1.2
114,624	+	cscK	Synpcc7942_0116	0.33	+2.7