Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0111

Experiment: Cisplatin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.00625 mg/ml
109,044	+		Synpcc7942_0109	0.33	+2.8
109,045	-		Synpcc7942_0109	0.33	-3.1
109,050	-		Synpcc7942_0109	0.34	-1.2
109,052	-		Synpcc7942_0109	0.35	+1.0
109,059	-		Synpcc7942_0109	0.36	+0.8
109,089	+		Synpcc7942_0109	0.42	-2.6
109,152	-		Synpcc7942_0109	0.54	+3.6
109,158	-		Synpcc7942_0109	0.55	-0.2
109,227	-				-0.2
109,227	-		Synpcc7942_0109	0.69	-1.2
109,295	+		Synpcc7942_0109	0.82	+1.8
109,303	-		Synpcc7942_0109	0.84	-1.8
109,314	+		Synpcc7942_0109	0.86	-1.8
109,359	+				+0.4
109,362	+				-3.2
109,370	-				-1.8
109,418	-				+1.6
109,431	+				+2.5
109,436	-				+0.8
109,466	+		Synpcc7942_0110	0.14	-1.5
109,477	+		Synpcc7942_0110	0.16	+3.4
109,485	-		Synpcc7942_0110	0.17	-1.2
109,498	+		Synpcc7942_0110	0.19	+1.1
109,498	+		Synpcc7942_0110	0.19	+3.4
109,498	+		Synpcc7942_0110	0.19	-0.2
109,498	+		Synpcc7942_0110	0.19	+5.7
109,498	+		Synpcc7942_0110	0.19	-2.2
109,498	+		Synpcc7942_0110	0.19	+3.1
109,498	+		Synpcc7942_0110	0.19	+3.1
109,498	+		Synpcc7942_0110	0.19	+4.0
109,498	+		Synpcc7942_0110	0.19	+2.2
109,498	+		Synpcc7942_0110	0.19	+2.6
109,506	-		Synpcc7942_0110	0.21	+2.5
109,506	-		Synpcc7942_0110	0.21	+1.6
109,506	-		Synpcc7942_0110	0.21	-0.8
109,506	-		Synpcc7942_0110	0.21	+2.3
109,506	-		Synpcc7942_0110	0.21	+2.6
109,506	-		Synpcc7942_0110	0.21	+3.8
109,506	-		Synpcc7942_0110	0.21	-0.2
109,506	-		Synpcc7942_0110	0.21	-2.8
109,506	-		Synpcc7942_0110	0.21	-3.0
109,506	-		Synpcc7942_0110	0.21	+1.4
109,552	-		Synpcc7942_0110	0.29	-0.2
109,556	-		Synpcc7942_0110	0.30	-0.6
109,606	-		Synpcc7942_0110	0.39	+3.9
109,606	-		Synpcc7942_0110	0.39	+1.5
109,634	+		Synpcc7942_0110	0.44	+1.6
109,648	+		Synpcc7942_0110	0.46	+4.0
109,648	+		Synpcc7942_0110	0.46	-4.9
109,648	+		Synpcc7942_0110	0.46	+0.7
109,666	-		Synpcc7942_0110	0.49	+4.3
109,666	-		Synpcc7942_0110	0.49	+0.8
109,680	-		Synpcc7942_0110	0.52	+3.8
109,691	-		Synpcc7942_0110	0.54	+2.3
109,710	-		Synpcc7942_0110	0.57	-1.2
109,710	-		Synpcc7942_0110	0.57	-0.2
109,735	+		Synpcc7942_0110	0.62	+0.4
109,764	+		Synpcc7942_0110	0.67	+2.7
109,772	-		Synpcc7942_0110	0.68	-1.8
109,790	+				+1.8
109,791	-		Synpcc7942_0110	0.72	-1.2
109,810	+		Synpcc7942_0110	0.75	-1.8
109,812	-		Synpcc7942_0110	0.76	+2.6
109,817	+		Synpcc7942_0110	0.77	-1.2
109,817	+		Synpcc7942_0110	0.77	+0.8
109,825	-		Synpcc7942_0110	0.78	+2.4
109,854	+		Synpcc7942_0110	0.83	+1.6
109,856	-		Synpcc7942_0110	0.84	+5.0
109,857	-		Synpcc7942_0110	0.84	-1.2
109,867	-		Synpcc7942_0110	0.85	+2.6
109,910	+				+3.5
109,917	-				-0.8
109,931	-				+4.4
109,931	-				-0.2
109,936	+				-1.8
109,945	+				+0.7
109,963	+				+3.2
109,972	-				+0.8
110,038	+				+0.4
110,046	-				+0.2
110,046	-				+3.4
110,046	-				+4.4
110,048	-				-1.2
110,067	-				-1.8
110,067	-				-0.2
110,120	+				+2.7
110,127	+				+2.9
110,139	+				-1.2
110,189	+	dnaK	Synpcc7942_0111	0.11	+2.3
110,189	+	dnaK	Synpcc7942_0111	0.11	-2.5
110,190	+	dnaK	Synpcc7942_0111	0.11	+5.3
110,198	-	dnaK	Synpcc7942_0111	0.12	+1.4
110,206	-	dnaK	Synpcc7942_0111	0.12	+2.2
110,218	-	dnaK	Synpcc7942_0111	0.13	+4.5
110,235	-	dnaK	Synpcc7942_0111	0.14	-3.4
110,255	-	dnaK	Synpcc7942_0111	0.15	-0.2
110,312	+	dnaK	Synpcc7942_0111	0.19	+3.2
110,313	+	dnaK	Synpcc7942_0111	0.19	-1.2
110,321	-	dnaK	Synpcc7942_0111	0.19	+5.0
110,321	-	dnaK	Synpcc7942_0111	0.19	+2.2
110,321	-	dnaK	Synpcc7942_0111	0.19	+3.5
110,356	-	dnaK	Synpcc7942_0111	0.22	-1.8
110,366	-	dnaK	Synpcc7942_0111	0.22	+2.1
110,371	-	dnaK	Synpcc7942_0111	0.22	+1.2
110,415	+	dnaK	Synpcc7942_0111	0.25	+2.7
110,416	-	dnaK	Synpcc7942_0111	0.25	+0.9
110,423	-	dnaK	Synpcc7942_0111	0.26	-0.2
110,439	-	dnaK	Synpcc7942_0111	0.27	+4.0
110,450	+	dnaK	Synpcc7942_0111	0.27	+3.7
110,450	+	dnaK	Synpcc7942_0111	0.27	-1.2
110,450	+	dnaK	Synpcc7942_0111	0.27	+0.4
110,450	+	dnaK	Synpcc7942_0111	0.27	+3.9
110,450	+	dnaK	Synpcc7942_0111	0.27	+1.3
110,450	+	dnaK	Synpcc7942_0111	0.27	-1.2
110,455	+	dnaK	Synpcc7942_0111	0.28	+4.0
110,458	-	dnaK	Synpcc7942_0111	0.28	+4.3
110,458	-	dnaK	Synpcc7942_0111	0.28	+1.6
110,458	-	dnaK	Synpcc7942_0111	0.28	+2.6
110,458	-	dnaK	Synpcc7942_0111	0.28	-0.4
110,461	-	dnaK	Synpcc7942_0111	0.28	+3.6
110,463	-	dnaK	Synpcc7942_0111	0.28	+2.8
110,504	+	dnaK	Synpcc7942_0111	0.31	-0.2
110,509	+	dnaK	Synpcc7942_0111	0.31	+2.0
110,509	+	dnaK	Synpcc7942_0111	0.31	+1.3
110,517	-	dnaK	Synpcc7942_0111	0.32	-0.2
110,517	-	dnaK	Synpcc7942_0111	0.32	+2.1
110,527	-	dnaK	Synpcc7942_0111	0.32	-0.2
110,540	-	dnaK	Synpcc7942_0111	0.33	+5.6
110,594	-	dnaK	Synpcc7942_0111	0.36	+3.0
110,599	-	dnaK	Synpcc7942_0111	0.37	+3.3
110,618	+	dnaK	Synpcc7942_0111	0.38	+3.8
110,698	+	dnaK	Synpcc7942_0111	0.43	-0.2
110,698	+	dnaK	Synpcc7942_0111	0.43	+4.3
110,747	+	dnaK	Synpcc7942_0111	0.46	-2.2
110,775	-	dnaK	Synpcc7942_0111	0.48	-1.2
110,785	-	dnaK	Synpcc7942_0111	0.48	+1.0
110,789	+	dnaK	Synpcc7942_0111	0.49	-1.8
110,802	+	dnaK	Synpcc7942_0111	0.49	+0.1
110,822	-	dnaK	Synpcc7942_0111	0.51	-1.2
110,832	-	dnaK	Synpcc7942_0111	0.51	-1.2
110,843	-	dnaK	Synpcc7942_0111	0.52	-1.8
110,843	-	dnaK	Synpcc7942_0111	0.52	-1.8
110,843	-	dnaK	Synpcc7942_0111	0.52	-1.2
110,843	-	dnaK	Synpcc7942_0111	0.52	+3.0
110,846	+	dnaK	Synpcc7942_0111	0.52	+1.5
110,873	+	dnaK	Synpcc7942_0111	0.54	+3.4
110,880	+	dnaK	Synpcc7942_0111	0.54	+2.8
110,888	-	dnaK	Synpcc7942_0111	0.55	+3.9
110,888	-	dnaK	Synpcc7942_0111	0.55	+2.2
111,119	-	dnaK	Synpcc7942_0111	0.69	+2.3
111,124	+	dnaK	Synpcc7942_0111	0.70	-0.2
111,191	+	dnaK	Synpcc7942_0111	0.74	+2.3
111,211	-	dnaK	Synpcc7942_0111	0.75	+3.0
111,279	+	dnaK	Synpcc7942_0111	0.79	+3.7
111,279	+	dnaK	Synpcc7942_0111	0.79	+3.0
111,279	+	dnaK	Synpcc7942_0111	0.79	-0.2
111,279	+	dnaK	Synpcc7942_0111	0.79	+3.5
111,287	-	dnaK	Synpcc7942_0111	0.80	+2.1
111,292	+	dnaK	Synpcc7942_0111	0.80	+4.5
111,292	-	dnaK	Synpcc7942_0111	0.80	+1.8
111,313	-	dnaK	Synpcc7942_0111	0.82	+1.2
111,320	+	dnaK	Synpcc7942_0111	0.82	+3.5
111,378	-	dnaK	Synpcc7942_0111	0.86	+2.3
111,399	+	dnaK	Synpcc7942_0111	0.87	-0.2
111,405	+	dnaK	Synpcc7942_0111	0.87	-0.2
111,470	+				+2.5
111,487	+				+4.8
111,497	-				-0.2
111,506	+				+1.8
111,511	+				+2.0
111,511	+				+2.0
111,519	-				-1.8
111,519	-				+3.4
111,519	-				+0.2
111,541	+				+0.8
111,578	+				-0.8
111,600	+				+2.2
111,602	+				+3.8
111,609	-				+1.4
111,609	-				+2.7
111,612	+				+1.5
111,620	-				+2.0
111,646	-				-0.2
111,648	+				+1.8
111,660	+				-2.2
111,660	+				+4.4
111,668	-				-3.8
111,714	+				-1.2
111,714	+				-1.2
111,722	-				+1.4
111,722	-				-3.5
111,728	-				+1.9
111,728	-				+2.0
111,746	-				+0.4
111,746	-				+1.8
111,760	+				-1.8
111,787	+				-0.8
111,787	+				+3.5
111,787	+				+0.8
111,787	+				-1.5
111,795	-				-1.5
111,795	-				-0.2
111,795	-				+0.4
111,795	-				-0.2
111,856	-	phr	Synpcc7942_0112	0.12	-0.2
111,858	+	phr	Synpcc7942_0112	0.12	+1.5
111,867	+	phr	Synpcc7942_0112	0.12	+1.2
111,877	+	phr	Synpcc7942_0112	0.13	+2.8
111,885	-	phr	Synpcc7942_0112	0.14	-1.2
111,904	+	phr	Synpcc7942_0112	0.15	-1.2
111,905	+	phr	Synpcc7942_0112	0.15	-0.8
111,963	-	phr	Synpcc7942_0112	0.19	+1.3
111,987	+	phr	Synpcc7942_0112	0.21	+2.4
112,016	+	phr	Synpcc7942_0112	0.23	+1.3
112,029	-	phr	Synpcc7942_0112	0.24	+0.8
112,029	-	phr	Synpcc7942_0112	0.24	-0.2
112,034	-	phr	Synpcc7942_0112	0.24	+0.6
112,048	+	phr	Synpcc7942_0112	0.25	-1.2
112,048	+	phr	Synpcc7942_0112	0.25	-2.2
112,058	+	phr	Synpcc7942_0112	0.26	+3.9
112,058	+	phr	Synpcc7942_0112	0.26	-1.8
112,066	-	phr	Synpcc7942_0112	0.26	+4.1
112,066	-	phr	Synpcc7942_0112	0.26	-1.2
112,068	+	phr	Synpcc7942_0112	0.26	-1.8
112,068	+	phr	Synpcc7942_0112	0.26	-1.2
112,081	+	phr	Synpcc7942_0112	0.27	-0.2
112,081	+	phr	Synpcc7942_0112	0.27	-1.2
112,081	+	phr	Synpcc7942_0112	0.27	-2.2
112,081	+	phr	Synpcc7942_0112	0.27	-0.2
112,081	+	phr	Synpcc7942_0112	0.27	-1.2
112,081	+	phr	Synpcc7942_0112	0.27	-0.0
112,081	+	phr	Synpcc7942_0112	0.27	+5.0
112,089	-	phr	Synpcc7942_0112	0.28	-0.6
112,108	-	phr	Synpcc7942_0112	0.29	+3.5
112,117	+	phr	Synpcc7942_0112	0.30	+3.0
112,156	+	phr	Synpcc7942_0112	0.32	-0.8
112,157	+	phr	Synpcc7942_0112	0.32	-1.8
112,162	+	phr	Synpcc7942_0112	0.33	+2.4
112,170	-	phr	Synpcc7942_0112	0.33	-1.8
112,201	-	phr	Synpcc7942_0112	0.35	+3.6
112,217	-	phr	Synpcc7942_0112	0.36	+1.0
112,233	+	phr	Synpcc7942_0112	0.38	+1.1
112,260	+	phr	Synpcc7942_0112	0.39	-2.2
112,260	+	phr	Synpcc7942_0112	0.39	+3.0
112,268	-	phr	Synpcc7942_0112	0.40	+2.2
112,268	-	phr	Synpcc7942_0112	0.40	-0.2
112,274	+	phr	Synpcc7942_0112	0.40	+2.5
112,275	+	phr	Synpcc7942_0112	0.40	-1.8
112,278	-	phr	Synpcc7942_0112	0.41	-0.2
112,289	-	phr	Synpcc7942_0112	0.41	-3.5
112,317	-	phr	Synpcc7942_0112	0.43	-1.2
112,443	+	phr	Synpcc7942_0112	0.52	-0.2
112,451	-	phr	Synpcc7942_0112	0.53	-0.2
112,455	-	phr	Synpcc7942_0112	0.53	+3.6
112,456	-	phr	Synpcc7942_0112	0.53	-1.8
112,470	+	phr	Synpcc7942_0112	0.54	-1.8
112,470	+	phr	Synpcc7942_0112	0.54	+1.4
112,470	+	phr	Synpcc7942_0112	0.54	-0.2
112,473	-	phr	Synpcc7942_0112	0.54	+3.6
112,475	+	phr	Synpcc7942_0112	0.54	-0.2
112,481	+	phr	Synpcc7942_0112	0.55	-1.2
112,489	-	phr	Synpcc7942_0112	0.55	-1.8
112,494	+	phr	Synpcc7942_0112	0.56	+2.7
112,502	+	phr	Synpcc7942_0112	0.56	-0.2
112,512	+	phr	Synpcc7942_0112	0.57	+2.6
112,556	-	phr	Synpcc7942_0112	0.60	-3.2
112,575	+	phr	Synpcc7942_0112	0.61	-2.0
112,600	-	phr	Synpcc7942_0112	0.63	+3.4