Strain Fitness in Sinorhizobium meliloti 1021 around SMc01867

Experiment: Gelatin (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc01868 and SMc01867 overlap by 4 nucleotidesSMc01867 and SMc01866 overlap by 4 nucleotides SMc01868: SMc01868 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 2,342,211 to 2,343,185 SMc01868 SMc01867: SMc01867 - UDP-N-acetylmuramate--L-alanine ligase, at 2,343,182 to 2,344,597 SMc01867 SMc01866: SMc01866 - UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase, at 2,344,594 to 2,345,718 SMc01866 Position (kb) 2343 2344 2345Strain fitness (log2 ratio) -1 0 1at 2344.642 kb on - strandat 2344.642 kb on - strandat 2344.649 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Gelatin (N)
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2,344,642 - -0.6
2,344,642 - +0.9
2,344,649 - -1.2

Or see this region's nucleotide sequence