Experiment: Gelatin (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21586 and SM_b21587 are separated by 151 nucleotides SM_b21587 and SM_b21588 are separated by 142 nucleotides
SM_b21586: SM_b21586 - glutathione synthetase, at 1,125,697 to 1,126,743
_b21586
SM_b21587: SM_b21587 - sugar uptake ABC transporter substrate-binding protein precursor, at 1,126,895 to 1,127,857
_b21587
SM_b21588: SM_b21588 - sugar uptake ABC transporter ATP-binding protein, at 1,128,000 to 1,129,517
_b21588
Position (kb)
1126
1127
1128 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1125.954 kb on - strand, within SM_b21586 at 1125.954 kb on - strand, within SM_b21586 at 1125.954 kb on - strand, within SM_b21586 at 1126.016 kb on - strand, within SM_b21586 at 1126.016 kb on - strand, within SM_b21586 at 1126.068 kb on - strand, within SM_b21586 at 1126.108 kb on + strand, within SM_b21586 at 1126.108 kb on + strand, within SM_b21586 at 1126.109 kb on - strand, within SM_b21586 at 1126.313 kb on - strand, within SM_b21586 at 1126.330 kb on + strand, within SM_b21586 at 1126.502 kb on + strand, within SM_b21586 at 1126.502 kb on + strand, within SM_b21586 at 1126.503 kb on - strand, within SM_b21586 at 1126.567 kb on - strand, within SM_b21586 at 1126.567 kb on - strand, within SM_b21586 at 1126.568 kb on + strand, within SM_b21586 at 1126.568 kb on + strand, within SM_b21586 at 1126.568 kb on + strand, within SM_b21586 at 1126.568 kb on + strand, within SM_b21586 at 1127.261 kb on + strand, within SM_b21587 at 1127.261 kb on + strand, within SM_b21587 at 1127.434 kb on + strand, within SM_b21587 at 1127.434 kb on + strand, within SM_b21587 at 1127.434 kb on + strand, within SM_b21587 at 1127.434 kb on + strand, within SM_b21587 at 1127.435 kb on - strand, within SM_b21587 at 1127.546 kb on + strand, within SM_b21587 at 1127.828 kb on + strand at 1127.828 kb on + strand at 1128.020 kb on + strand at 1128.265 kb on - strand, within SM_b21588 at 1128.294 kb on - strand, within SM_b21588 at 1128.432 kb on + strand, within SM_b21588 at 1128.432 kb on + strand, within SM_b21588 at 1128.433 kb on - strand, within SM_b21588 at 1128.433 kb on - strand, within SM_b21588 at 1128.560 kb on - strand, within SM_b21588 at 1128.621 kb on + strand, within SM_b21588
Per-strain Table
Position Strand Gene LocusTag Fraction Gelatin (N) remove 1,125,954 - SM_b21586 0.25 +0.2 1,125,954 - SM_b21586 0.25 -0.3 1,125,954 - SM_b21586 0.25 +0.1 1,126,016 - SM_b21586 0.30 -0.1 1,126,016 - SM_b21586 0.30 +0.4 1,126,068 - SM_b21586 0.35 +0.1 1,126,108 + SM_b21586 0.39 +0.0 1,126,108 + SM_b21586 0.39 +0.6 1,126,109 - SM_b21586 0.39 -1.5 1,126,313 - SM_b21586 0.59 +0.1 1,126,330 + SM_b21586 0.60 -0.2 1,126,502 + SM_b21586 0.77 +0.6 1,126,502 + SM_b21586 0.77 +0.2 1,126,503 - SM_b21586 0.77 +1.8 1,126,567 - SM_b21586 0.83 -0.5 1,126,567 - SM_b21586 0.83 -0.1 1,126,568 + SM_b21586 0.83 +2.5 1,126,568 + SM_b21586 0.83 -0.7 1,126,568 + SM_b21586 0.83 -0.4 1,126,568 + SM_b21586 0.83 -0.0 1,127,261 + SM_b21587 0.38 +0.1 1,127,261 + SM_b21587 0.38 -1.6 1,127,434 + SM_b21587 0.56 +0.3 1,127,434 + SM_b21587 0.56 +1.5 1,127,434 + SM_b21587 0.56 +2.4 1,127,434 + SM_b21587 0.56 +0.1 1,127,435 - SM_b21587 0.56 -0.2 1,127,546 + SM_b21587 0.68 -0.2 1,127,828 + -1.1 1,127,828 + +0.3 1,128,020 + -2.8 1,128,265 - SM_b21588 0.17 -1.8 1,128,294 - SM_b21588 0.19 -0.5 1,128,432 + SM_b21588 0.28 +0.5 1,128,432 + SM_b21588 0.28 +2.7 1,128,433 - SM_b21588 0.29 -0.4 1,128,433 - SM_b21588 0.29 +0.5 1,128,560 - SM_b21588 0.37 -0.0 1,128,621 + SM_b21588 0.41 +0.7
Or see this region's nucleotide sequence