Experiment: Gelatin (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20520 and SM_b20521 are separated by 292 nucleotides
SM_b20520: SM_b20520 - hypothetical protein, at 546,127 to 546,684
_b20520
SM_b20521: SM_b20521 - hypothetical protein, at 546,977 to 548,086
_b20521
Position (kb) 546
547 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 545.466 kb on - strand at 545.536 kb on + strand at 545.700 kb on + strand at 545.748 kb on - strand at 545.748 kb on - strand at 545.786 kb on + strand at 545.786 kb on + strand at 545.868 kb on - strand at 546.025 kb on + strand at 546.209 kb on + strand, within SM_b20520 at 546.209 kb on + strand, within SM_b20520 at 546.210 kb on - strand, within SM_b20520 at 546.210 kb on - strand, within SM_b20520 at 546.225 kb on + strand, within SM_b20520 at 546.250 kb on + strand, within SM_b20520 at 546.250 kb on + strand, within SM_b20520 at 546.250 kb on + strand, within SM_b20520 at 546.250 kb on + strand, within SM_b20520 at 546.250 kb on + strand, within SM_b20520 at 546.250 kb on + strand, within SM_b20520 at 546.251 kb on - strand, within SM_b20520 at 546.251 kb on - strand, within SM_b20520 at 546.251 kb on - strand, within SM_b20520 at 546.251 kb on - strand, within SM_b20520 at 546.251 kb on - strand, within SM_b20520 at 546.341 kb on + strand, within SM_b20520 at 546.342 kb on - strand, within SM_b20520 at 546.456 kb on + strand, within SM_b20520 at 546.457 kb on - strand, within SM_b20520 at 546.603 kb on + strand, within SM_b20520 at 546.603 kb on + strand, within SM_b20520 at 546.604 kb on - strand, within SM_b20520 at 546.725 kb on + strand at 546.726 kb on - strand at 546.840 kb on + strand at 546.840 kb on + strand at 546.840 kb on + strand at 546.841 kb on - strand at 546.943 kb on - strand at 546.962 kb on + strand at 546.962 kb on + strand at 546.963 kb on - strand at 546.963 kb on - strand at 547.129 kb on + strand, within SM_b20521 at 547.129 kb on + strand, within SM_b20521 at 547.157 kb on + strand, within SM_b20521 at 547.157 kb on + strand, within SM_b20521 at 547.157 kb on + strand, within SM_b20521 at 547.157 kb on + strand, within SM_b20521 at 547.311 kb on + strand, within SM_b20521 at 547.311 kb on + strand, within SM_b20521 at 547.312 kb on - strand, within SM_b20521 at 547.440 kb on + strand, within SM_b20521 at 547.441 kb on - strand, within SM_b20521 at 547.441 kb on - strand, within SM_b20521 at 547.544 kb on + strand, within SM_b20521 at 547.545 kb on - strand, within SM_b20521 at 547.583 kb on + strand, within SM_b20521 at 547.583 kb on + strand, within SM_b20521
Per-strain Table
Position Strand Gene LocusTag Fraction Gelatin (N) remove 545,466 - -0.3 545,536 + +2.2 545,700 + +0.2 545,748 - -2.4 545,748 - +1.1 545,786 + -0.6 545,786 + -2.9 545,868 - +0.2 546,025 + -0.1 546,209 + SM_b20520 0.15 +0.7 546,209 + SM_b20520 0.15 +1.6 546,210 - SM_b20520 0.15 +0.2 546,210 - SM_b20520 0.15 +0.7 546,225 + SM_b20520 0.18 -0.8 546,250 + SM_b20520 0.22 +0.4 546,250 + SM_b20520 0.22 -0.2 546,250 + SM_b20520 0.22 +1.2 546,250 + SM_b20520 0.22 +1.0 546,250 + SM_b20520 0.22 +0.1 546,250 + SM_b20520 0.22 +0.1 546,251 - SM_b20520 0.22 +0.3 546,251 - SM_b20520 0.22 -0.2 546,251 - SM_b20520 0.22 +0.6 546,251 - SM_b20520 0.22 +0.9 546,251 - SM_b20520 0.22 +0.6 546,341 + SM_b20520 0.38 +1.5 546,342 - SM_b20520 0.39 +0.3 546,456 + SM_b20520 0.59 +2.2 546,457 - SM_b20520 0.59 +1.3 546,603 + SM_b20520 0.85 +0.7 546,603 + SM_b20520 0.85 +0.1 546,604 - SM_b20520 0.85 +0.9 546,725 + +1.0 546,726 - -1.8 546,840 + -0.0 546,840 + +0.0 546,840 + -0.2 546,841 - -1.4 546,943 - +0.5 546,962 + -0.3 546,962 + -0.6 546,963 - +0.2 546,963 - -0.4 547,129 + SM_b20521 0.14 -0.2 547,129 + SM_b20521 0.14 -2.3 547,157 + SM_b20521 0.16 +0.2 547,157 + SM_b20521 0.16 +0.1 547,157 + SM_b20521 0.16 -0.4 547,157 + SM_b20521 0.16 -0.2 547,311 + SM_b20521 0.30 -0.4 547,311 + SM_b20521 0.30 +1.2 547,312 - SM_b20521 0.30 -0.1 547,440 + SM_b20521 0.42 +0.0 547,441 - SM_b20521 0.42 +0.5 547,441 - SM_b20521 0.42 +0.6 547,544 + SM_b20521 0.51 +0.5 547,545 - SM_b20521 0.51 +2.1 547,583 + SM_b20521 0.55 -0.2 547,583 + SM_b20521 0.55 +0.4
Or see this region's nucleotide sequence