Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_78

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
80,503	-		Pf1N1B4_76	0.86	-0.5
80,659	-				-1.0
80,705	+				-2.0
80,752	+				-0.2
80,752	+				-2.2
80,752	+				-0.4
80,752	+				+0.4
80,753	-				-0.9
80,753	-				-1.2
80,753	-				+0.7
80,753	-				-2.2
80,824	+				-0.0
80,824	+				+2.2
80,824	+				+0.5
80,825	-				+0.8
80,825	-				-1.2
80,877	-				+1.2
80,877	-				+1.4
80,911	+				+1.4
80,927	-				-1.6
81,030	+				+0.8
81,030	+				+0.4
81,031	-				+0.0
81,071	+		Pf1N1B4_77	0.22	+0.1
81,071	+		Pf1N1B4_77	0.22	+0.7
81,071	+		Pf1N1B4_77	0.22	-1.6
81,137	+		Pf1N1B4_77	0.43	-0.6
81,162	+		Pf1N1B4_77	0.51	-0.9
81,220	+		Pf1N1B4_77	0.69	-0.5
81,289	+				-0.1
81,290	-				+0.9
81,290	-				-0.4
81,315	+				-0.4
81,316	-				-1.0
81,334	+				+0.9
81,335	-				+0.8
81,335	-				-0.3
81,403	-				+0.8
81,403	-				+1.2
81,426	+				+0.6
81,778	-		Pf1N1B4_78	0.59	-0.8
81,778	-		Pf1N1B4_78	0.59	+0.9
81,778	-		Pf1N1B4_78	0.59	+0.5
81,778	-		Pf1N1B4_78	0.59	+0.5
81,967	+				+0.6
81,968	-				+1.1
82,022	+				+1.4
82,064	+				-0.2
82,064	+				+0.4
82,064	+				+0.5
82,065	-				+1.5
82,065	-				+2.1
82,065	-				+0.2
82,065	-				+0.4
82,065	-				+0.5
82,070	+				-1.2
82,071	-				-0.6
82,071	-				-0.6
82,071	-				+1.4
82,090	+				+1.2
82,090	+				-1.0
82,091	-				-1.0
82,091	-				+0.3
82,091	-				-0.3
82,124	+				+2.4
82,125	-				+1.4
82,324	+		Pf1N1B4_79	0.41	-1.1
82,324	+		Pf1N1B4_79	0.41	-1.1
82,325	-		Pf1N1B4_79	0.41	-0.1
82,357	+		Pf1N1B4_79	0.50	+3.5
82,358	-		Pf1N1B4_79	0.50	-0.1
82,358	-		Pf1N1B4_79	0.50	-1.0
82,358	-		Pf1N1B4_79	0.50	+0.6
82,358	-		Pf1N1B4_79	0.50	-2.0
82,358	-		Pf1N1B4_79	0.50	+0.9
82,492	+		Pf1N1B4_79	0.86	+0.4
82,526	+				-0.2
82,526	+				-1.6
82,526	+				+0.1
82,527	-				-0.4
82,527	-				-1.2
82,527	-				-2.0
82,527	-				+0.1
82,540	+				-0.6
82,564	+				+0.6
82,564	+				-0.2
82,564	+				+2.0
82,565	-				-1.0
82,565	-				+0.5
82,688	+				+1.1
82,688	+				+0.4
82,689	-				+0.6
82,719	-		Pf1N1B4_80	0.12	-0.1
82,744	+		Pf1N1B4_80	0.14	+0.8
82,744	+		Pf1N1B4_80	0.14	+0.0
82,745	-		Pf1N1B4_80	0.14	+1.7