Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5077
Experiment: methylglyoxal 0.004 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.004 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 5,622,787 | - | Pf1N1B4_5076 | 0.79 | +0.0 | |
| 5,622,787 | - | Pf1N1B4_5076 | 0.79 | -0.4 | |
| 5,622,974 | + | -2.3 | |||
| 5,623,666 | + | Pf1N1B4_5077 | 0.66 | -0.6 | |
| 5,623,667 | - | Pf1N1B4_5077 | 0.66 | -1.1 | |
| 5,623,678 | - | Pf1N1B4_5077 | 0.67 | -1.5 | |
| 5,624,056 | + | +0.8 | |||
| 5,624,057 | - | +1.7 | |||
| 5,624,057 | - | +0.4 | |||
| 5,624,057 | - | +0.6 | |||
| 5,624,207 | - | Pf1N1B4_5078 | 0.27 | -0.3 | |
| 5,624,775 | - | -2.3 | |||
| 5,624,839 | - | +2.5 |
Or see this region's nucleotide sequence