Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5005

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
5,555,112	-		Pf1N1B4_5004	0.43	+1.5
5,555,348	+				-0.6
5,555,348	+		Pf1N1B4_5004	0.68	-0.6
5,555,348	+				-1.6
5,555,349	-		Pf1N1B4_5004	0.68	-1.0
5,555,349	-		Pf1N1B4_5004	0.68	+1.0
5,555,349	-				+1.3
5,555,360	+		Pf1N1B4_5004	0.69	-0.5
5,555,378	+		Pf1N1B4_5004	0.71	-1.5
5,555,379	-		Pf1N1B4_5004	0.71	-0.3
5,555,379	-		Pf1N1B4_5004	0.71	-1.5
5,555,639	+				+0.9
5,555,640	-				-1.0
5,555,643	+				+0.3
5,555,643	+				+0.7
5,555,643	+				-2.3
5,555,644	-				-0.7
5,556,068	+				-2.0
5,556,068	+		Pf1N1B4_5005	0.15	+0.4
5,556,129	-		Pf1N1B4_5005	0.22	-1.4
5,556,358	-		Pf1N1B4_5005	0.48	-1.3
5,556,488	+				-2.3
5,556,507	-				-1.3
5,556,549	+		Pf1N1B4_5005	0.70	-1.8
5,556,549	+		Pf1N1B4_5005	0.70	-0.7
5,556,815	-				-0.4
5,556,832	+				+0.7
5,556,833	-				+0.0
5,556,833	-				+1.0
5,557,010	+				-1.8
5,557,010	+				+0.6
5,557,119	+		Pf1N1B4_5006	0.14	-1.4
5,557,120	-		Pf1N1B4_5006	0.14	+0.2
5,557,212	+		Pf1N1B4_5006	0.20	-0.8
5,557,213	-		Pf1N1B4_5006	0.20	+1.2
5,557,230	-		Pf1N1B4_5006	0.21	-0.7
5,557,254	-		Pf1N1B4_5006	0.22	+0.6
5,557,296	+		Pf1N1B4_5006	0.25	+0.4
5,557,296	+		Pf1N1B4_5006	0.25	+0.3
5,557,297	-		Pf1N1B4_5006	0.25	+1.0
5,557,452	+				-1.0
5,557,537	+		Pf1N1B4_5006	0.41	+0.0
5,557,592	+		Pf1N1B4_5006	0.44	-0.6
5,557,592	+				+0.7