Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4585
Experiment: methylglyoxal 0.004 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.004 vol% |
---|---|---|---|---|---|
remove | |||||
5,055,682 | - | Pf1N1B4_4584 | 0.57 | -0.3 | |
5,055,927 | + | Pf1N1B4_4584 | 0.68 | -2.5 | |
5,055,928 | - | Pf1N1B4_4584 | 0.69 | -0.1 | |
5,055,928 | - | Pf1N1B4_4584 | 0.69 | +0.5 | |
5,056,221 | + | Pf1N1B4_4584 | 0.82 | +0.1 | |
5,056,221 | + | +0.6 | |||
5,056,221 | + | Pf1N1B4_4584 | 0.82 | -0.5 | |
5,056,222 | - | Pf1N1B4_4584 | 0.82 | +0.9 | |
5,056,367 | + | Pf1N1B4_4584 | 0.89 | -0.5 | |
5,056,420 | - | +0.5 | |||
5,056,758 | + | Pf1N1B4_4585 | 0.25 | -2.1 | |
5,056,860 | + | Pf1N1B4_4585 | 0.43 | -0.2 | |
5,056,861 | - | Pf1N1B4_4585 | 0.43 | -2.5 | |
5,057,185 | - | -1.1 | |||
5,057,236 | - | +0.0 | |||
5,057,236 | - | +0.5 | |||
5,057,759 | + | Pf1N1B4_4586 | 0.81 | +1.6 | |
5,057,842 | + | -0.0 | |||
5,058,126 | + | Pf1N1B4_4587 | 0.51 | -0.2 | |
5,058,126 | + | Pf1N1B4_4587 | 0.51 | +0.0 | |
5,058,126 | + | Pf1N1B4_4587 | 0.51 | -1.3 | |
5,058,127 | - | Pf1N1B4_4587 | 0.51 | +0.6 |
Or see this region's nucleotide sequence