Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4385

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
4,843,117	+		Pf1N1B4_4384	0.35	+0.4
4,843,536	-				+0.1
4,843,562	-				-0.7
4,843,615	-				+1.7
4,843,852	-				+0.1
4,843,852	-				-0.3
4,844,254	+				+2.4
4,844,254	+		Pf1N1B4_4385	0.56	-2.5
4,844,254	+		Pf1N1B4_4385	0.56	+0.6
4,844,255	-		Pf1N1B4_4385	0.57	-1.5
4,844,255	-		Pf1N1B4_4385	0.57	-1.0
4,844,255	-				+0.7
4,844,255	-		Pf1N1B4_4385	0.57	+0.4
4,844,255	-		Pf1N1B4_4385	0.57	-2.2
4,844,258	+		Pf1N1B4_4385	0.58	+0.1
4,844,258	+				-1.9
4,844,357	+				-0.5
4,844,358	-				+0.1
4,844,368	+				+0.3
4,844,368	+				-1.1
4,844,369	-				-1.3
4,844,369	-				-0.1
4,844,369	-				-0.6
4,844,402	+				-0.4
4,844,402	+				-1.7
4,844,402	+				-0.0
4,844,402	+				-0.5
4,844,517	+				+0.4
4,844,518	-				-0.9
4,844,518	-				-1.5
4,844,522	-				+0.2
4,844,522	-				+1.1
4,844,524	-				+0.5
4,844,524	-				+1.5
4,844,524	-				-0.5
4,845,327	+				+1.1
4,845,327	+		Pf1N1B4_4386	0.87	-0.9
4,845,327	+				-0.9
4,845,327	+		Pf1N1B4_4386	0.87	-1.2
4,845,327	+				+0.1
4,845,327	+		Pf1N1B4_4386	0.87	-0.7
4,845,327	+		Pf1N1B4_4386	0.87	-1.5
4,845,328	-		Pf1N1B4_4386	0.88	-0.2
4,845,328	-		Pf1N1B4_4386	0.88	+2.9
4,845,328	-		Pf1N1B4_4386	0.88	-3.8