Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3956

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
4,394,642	+		Pf1N1B4_3955	0.87	-1.3
4,394,913	+				+0.8
4,394,913	+				-1.3
4,394,913	+				+0.1
4,394,914	-				+0.3
4,394,916	+				-0.7
4,394,916	+				-0.7
4,394,917	-				+0.7
4,394,917	-				+1.3
4,394,922	+				+1.3
4,394,922	+				-0.9
4,394,922	+				+2.1
4,394,922	+				-0.3
4,394,922	+				+0.7
4,394,922	+				-0.3
4,394,923	-				+0.6
4,394,987	+				-2.3
4,394,987	+				-1.7
4,394,988	-				-0.0
4,395,071	+				-1.3
4,395,071	+				+0.2
4,395,072	-				+0.7
4,395,523	-		Pf1N1B4_3956	0.27	-1.9
4,395,523	-		Pf1N1B4_3956	0.27	-0.9
4,395,627	-		Pf1N1B4_3956	0.42	-1.3
4,395,707	+		Pf1N1B4_3956	0.53	-1.1
4,395,708	-		Pf1N1B4_3956	0.54	-1.3
4,395,759	+				-0.7
4,395,759	+		Pf1N1B4_3956	0.61	+0.3
4,395,759	+		Pf1N1B4_3956	0.61	-0.5
4,395,759	+		Pf1N1B4_3956	0.61	-1.3
4,395,759	+		Pf1N1B4_3956	0.61	-0.2
4,395,759	+		Pf1N1B4_3956	0.61	+0.9
4,395,759	+		Pf1N1B4_3956	0.61	-0.1
4,395,760	-		Pf1N1B4_3956	0.61	-1.7
4,395,760	-		Pf1N1B4_3956	0.61	-1.3
4,395,760	-				-0.1
4,395,794	+		Pf1N1B4_3956	0.66	-0.5
4,395,902	+		Pf1N1B4_3956	0.81	-0.5
4,396,043	+				+0.0
4,396,043	+				-2.3
4,396,250	+				+0.7
4,396,251	-				-0.1
4,396,251	-				+0.3
4,396,251	-				-1.9
4,396,251	-				+0.5
4,396,251	-				-0.6
4,396,251	-				-0.7
4,396,260	-				-0.3
4,396,260	-		Pf1N1B4_3957	0.11	+2.0
4,396,260	-		Pf1N1B4_3957	0.11	+0.1
4,396,385	+		Pf1N1B4_3957	0.34	+0.2
4,396,386	-		Pf1N1B4_3957	0.34	-2.0
4,396,386	-		Pf1N1B4_3957	0.34	-0.1
4,396,455	+		Pf1N1B4_3957	0.46	+2.7
4,396,456	-		Pf1N1B4_3957	0.46	-0.6
4,396,456	-		Pf1N1B4_3957	0.46	+1.3
4,396,458	-		Pf1N1B4_3957	0.47	+0.9
4,396,458	-				+1.3
4,396,664	+		Pf1N1B4_3957	0.84	-0.5
4,396,665	-		Pf1N1B4_3957	0.85	-0.7
4,396,665	-		Pf1N1B4_3957	0.85	-0.5
4,396,682	-		Pf1N1B4_3957	0.88	-2.0
4,396,711	+				-0.9
4,396,711	+				+1.2
4,396,722	-				+0.5
4,396,749	+				-0.1
4,396,749	+				+0.1
4,396,813	+				+0.2
4,396,813	+				-0.9
4,396,813	+				-0.3
4,396,813	+				-0.3
4,396,813	+				-1.3
4,396,872	-				+0.7
4,396,872	-				-1.1
4,397,028	+				+1.5
4,397,028	+		Pf1N1B4_3958	0.11	+0.0
4,397,028	+		Pf1N1B4_3958	0.11	+1.3
4,397,029	-		Pf1N1B4_3958	0.11	+0.3
4,397,029	-		Pf1N1B4_3958	0.11	-0.7
4,397,029	-		Pf1N1B4_3958	0.11	-0.7
4,397,029	-		Pf1N1B4_3958	0.11	-0.0
4,397,029	-		Pf1N1B4_3958	0.11	-0.4
4,397,029	-		Pf1N1B4_3958	0.11	+0.1
4,397,029	-		Pf1N1B4_3958	0.11	+0.3
4,397,029	-		Pf1N1B4_3958	0.11	+0.4
4,397,029	-		Pf1N1B4_3958	0.11	-0.7