Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3762

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
4,172,375	+		Pf1N1B4_3760	0.46	+0.8
4,172,375	+		Pf1N1B4_3760	0.46	+0.9
4,172,375	+		Pf1N1B4_3760	0.46	-0.6
4,172,375	+		Pf1N1B4_3760	0.46	-0.6
4,172,376	-		Pf1N1B4_3760	0.46	-1.2
4,172,420	+		Pf1N1B4_3760	0.51	-0.2
4,172,420	+		Pf1N1B4_3760	0.51	-0.4
4,172,421	-		Pf1N1B4_3760	0.51	+0.1
4,172,421	-				+1.4
4,172,450	+		Pf1N1B4_3760	0.55	-0.5
4,172,451	-		Pf1N1B4_3760	0.55	+1.4
4,172,467	+				-0.9
4,172,467	+		Pf1N1B4_3760	0.57	+0.1
4,172,467	+		Pf1N1B4_3760	0.57	+0.1
4,172,467	+		Pf1N1B4_3760	0.57	-0.2
4,172,467	+		Pf1N1B4_3760	0.57	-0.6
4,172,468	-		Pf1N1B4_3760	0.57	-1.0
4,172,468	-		Pf1N1B4_3760	0.57	-0.1
4,172,506	+		Pf1N1B4_3760	0.62	-0.0
4,172,543	+		Pf1N1B4_3760	0.67	+1.1
4,172,543	+		Pf1N1B4_3760	0.67	+1.8
4,172,585	+				-1.6
4,172,585	+		Pf1N1B4_3760	0.72	+0.9
4,172,586	-		Pf1N1B4_3760	0.72	+0.7
4,172,699	+		Pf1N1B4_3760	0.87	-1.6
4,172,699	+		Pf1N1B4_3760	0.87	+1.1
4,172,699	+		Pf1N1B4_3760	0.87	-1.6
4,172,728	+				-0.2
4,172,728	+				+0.4
4,172,728	+				+0.4
4,172,728	+				-0.6
4,172,728	+				+0.7
4,172,729	-				+0.8
4,172,729	-				-0.9
4,172,823	+				+1.0
4,172,911	+				+0.8
4,173,206	-				+2.7
4,173,703	+		Pf1N1B4_3762	0.30	-0.8
4,173,703	+		Pf1N1B4_3762	0.30	-1.4
4,173,703	+		Pf1N1B4_3762	0.30	+0.1
4,173,781	+		Pf1N1B4_3762	0.36	-0.3
4,173,782	-		Pf1N1B4_3762	0.37	-1.2
4,173,782	-		Pf1N1B4_3762	0.37	-0.6
4,173,835	+		Pf1N1B4_3762	0.41	-2.2
4,173,835	+		Pf1N1B4_3762	0.41	-0.6
4,173,836	-		Pf1N1B4_3762	0.41	+0.2
4,173,836	-		Pf1N1B4_3762	0.41	-0.1
4,173,836	-		Pf1N1B4_3762	0.41	-0.6
4,173,847	+		Pf1N1B4_3762	0.42	-0.9
4,173,847	+		Pf1N1B4_3762	0.42	+2.0
4,173,848	-		Pf1N1B4_3762	0.42	-1.6
4,173,901	+		Pf1N1B4_3762	0.46	-1.2
4,173,901	+		Pf1N1B4_3762	0.46	+0.4
4,173,901	+		Pf1N1B4_3762	0.46	-1.2
4,173,901	+		Pf1N1B4_3762	0.46	-1.4
4,173,901	+		Pf1N1B4_3762	0.46	-1.4
4,173,902	-		Pf1N1B4_3762	0.46	-1.2
4,173,902	-				+0.4
4,174,096	+		Pf1N1B4_3762	0.62	-0.6
4,174,282	+		Pf1N1B4_3762	0.77	-1.2
4,174,282	+		Pf1N1B4_3762	0.77	+0.4
4,174,327	+		Pf1N1B4_3762	0.81	-1.8
4,174,328	-		Pf1N1B4_3762	0.81	-2.1
4,174,328	-		Pf1N1B4_3762	0.81	-0.9
4,174,328	-		Pf1N1B4_3762	0.81	-1.9
4,174,399	+				-0.6
4,174,400	-		Pf1N1B4_3762	0.87	+0.4
4,174,490	-				-0.4
4,174,630	-				-0.6
4,174,630	-				+0.7
4,174,630	-				+0.9
4,174,687	+		Pf1N1B4_3763	0.12	+1.0
4,174,688	-		Pf1N1B4_3763	0.12	+0.4
4,174,773	+		Pf1N1B4_3763	0.29	-0.6
4,174,773	+		Pf1N1B4_3763	0.29	-0.2
4,174,773	+		Pf1N1B4_3763	0.29	-1.2
4,174,773	+		Pf1N1B4_3763	0.29	+1.9
4,174,774	-		Pf1N1B4_3763	0.29	-0.6
4,174,774	-		Pf1N1B4_3763	0.29	+0.0
4,174,774	-		Pf1N1B4_3763	0.29	+1.0
4,174,774	-		Pf1N1B4_3763	0.29	+0.2
4,174,774	-		Pf1N1B4_3763	0.29	+0.9
4,174,774	-		Pf1N1B4_3763	0.29	+0.2
4,174,777	+		Pf1N1B4_3763	0.30	-0.6
4,174,777	+		Pf1N1B4_3763	0.30	-0.3
4,174,777	+		Pf1N1B4_3763	0.30	+0.2
4,174,777	+		Pf1N1B4_3763	0.30	+0.4
4,174,778	-		Pf1N1B4_3763	0.30	+0.1
4,174,778	-		Pf1N1B4_3763	0.30	-1.2
4,174,778	-		Pf1N1B4_3763	0.30	-0.3
4,174,778	-		Pf1N1B4_3763	0.30	-1.6
4,175,188	+				-0.4
4,175,253	+				-0.6
4,175,253	+				+1.6
4,175,253	+				-1.6
4,175,253	+				-1.0
4,175,254	-				+0.4
4,175,254	-				+0.1
4,175,257	+				+0.4
4,175,258	-				+0.7
4,175,362	+		Pf1N1B4_3764	0.11	-0.8
4,175,363	-		Pf1N1B4_3764	0.11	-0.3
4,175,363	-		Pf1N1B4_3764	0.11	+0.4
4,175,363	-		Pf1N1B4_3764	0.11	-0.4
4,175,363	-		Pf1N1B4_3764	0.11	-0.3
4,175,363	-		Pf1N1B4_3764	0.11	-1.8
4,175,488	-		Pf1N1B4_3764	0.24	-0.0