Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3479

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
3,884,680	+				-1.5
3,884,692	+				-0.9
3,884,693	-				-0.3
3,884,799	+				+1.1
3,884,830	-				+0.2
3,884,831	+				+1.1
3,884,832	-				-2.3
3,884,832	-				+2.5
3,884,832	-				-0.2
3,884,859	-				-2.5
3,884,875	-				-0.0
3,884,900	+				-0.5
3,884,998	+				-1.5
3,884,998	+				-0.9
3,884,999	-				+1.0
3,885,086	+		Pf1N1B4_3478	0.22	+1.5
3,885,151	+		Pf1N1B4_3478	0.31	+0.9
3,885,151	+		Pf1N1B4_3478	0.31	-1.5
3,885,151	+		Pf1N1B4_3478	0.31	+0.2
3,885,151	+		Pf1N1B4_3478	0.31	-0.5
3,885,151	+		Pf1N1B4_3478	0.31	-0.5
3,885,152	-		Pf1N1B4_3478	0.31	-0.5
3,885,152	-		Pf1N1B4_3478	0.31	-0.9
3,885,152	-		Pf1N1B4_3478	0.31	+2.7
3,885,152	-		Pf1N1B4_3478	0.31	+0.1
3,885,152	-		Pf1N1B4_3478	0.31	+2.1
3,885,152	-		Pf1N1B4_3478	0.31	+0.4
3,885,152	-		Pf1N1B4_3478	0.31	+0.5
3,885,152	-		Pf1N1B4_3478	0.31	+1.3
3,885,152	-		Pf1N1B4_3478	0.31	-0.5
3,885,232	+		Pf1N1B4_3478	0.42	+0.5
3,885,233	-		Pf1N1B4_3478	0.42	+0.2
3,885,233	-		Pf1N1B4_3478	0.42	-1.5
3,885,233	-		Pf1N1B4_3478	0.42	-0.6
3,885,233	-		Pf1N1B4_3478	0.42	+1.5
3,885,457	-		Pf1N1B4_3478	0.73	-0.5
3,885,476	+		Pf1N1B4_3478	0.76	+1.1
3,885,476	+		Pf1N1B4_3478	0.76	-0.5
3,885,477	-		Pf1N1B4_3478	0.76	+0.9
3,885,477	-		Pf1N1B4_3478	0.76	+0.8
3,885,672	+				-0.5
3,885,672	+				+0.2
3,885,672	+				-1.3
3,885,673	-				-0.7
3,886,068	+		Pf1N1B4_3479	0.26	-0.1
3,886,068	+		Pf1N1B4_3479	0.26	+1.8
3,886,068	+		Pf1N1B4_3479	0.26	-2.5
3,886,069	-		Pf1N1B4_3479	0.26	-0.6
3,886,069	-		Pf1N1B4_3479	0.26	-1.8
3,886,069	-		Pf1N1B4_3479	0.26	+0.5
3,886,320	+		Pf1N1B4_3479	0.42	+1.8
3,886,320	+		Pf1N1B4_3479	0.42	-1.1
3,886,320	+		Pf1N1B4_3479	0.42	-0.9
3,886,746	+		Pf1N1B4_3479	0.68	-2.1
3,886,746	+		Pf1N1B4_3479	0.68	-0.5
3,886,746	+				+0.1
3,886,746	+		Pf1N1B4_3479	0.68	+1.5
3,886,747	-		Pf1N1B4_3479	0.68	-0.1
3,886,747	-		Pf1N1B4_3479	0.68	-0.8
3,886,747	-		Pf1N1B4_3479	0.68	-0.1
3,886,747	-		Pf1N1B4_3479	0.68	-1.1
3,886,923	+		Pf1N1B4_3479	0.79	-1.5
3,886,923	+		Pf1N1B4_3479	0.79	+2.8
3,886,923	+		Pf1N1B4_3479	0.79	-1.7
3,886,924	-		Pf1N1B4_3479	0.79	-0.8
3,886,951	+		Pf1N1B4_3479	0.81	+0.5
3,886,952	-		Pf1N1B4_3479	0.81	+1.0
3,886,952	-		Pf1N1B4_3479	0.81	+1.7
3,886,952	-		Pf1N1B4_3479	0.81	+0.1
3,886,955	+		Pf1N1B4_3479	0.81	-1.2
3,886,955	+		Pf1N1B4_3479	0.81	-0.9
3,886,956	-		Pf1N1B4_3479	0.81	-0.2
3,886,996	-		Pf1N1B4_3479	0.84	-2.1
3,887,023	+		Pf1N1B4_3479	0.85	-0.5
3,887,024	-		Pf1N1B4_3479	0.85	-1.5
3,887,383	-				-1.0