Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3109

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
3,495,183	+		Pf1N1B4_3108	0.11	-1.2
3,495,193	+		Pf1N1B4_3108	0.12	-1.1
3,495,193	+		Pf1N1B4_3108	0.12	-1.7
3,495,193	+		Pf1N1B4_3108	0.12	+0.6
3,495,193	+		Pf1N1B4_3108	0.12	-2.8
3,495,193	+		Pf1N1B4_3108	0.12	-2.4
3,495,193	+		Pf1N1B4_3108	0.12	-0.1
3,495,194	-		Pf1N1B4_3108	0.12	+0.6
3,495,194	-				+2.2
3,495,222	+		Pf1N1B4_3108	0.15	-0.1
3,495,322	+		Pf1N1B4_3108	0.24	-0.6
3,495,323	-				-0.4
3,495,323	-		Pf1N1B4_3108	0.24	+0.5
3,495,463	+				-0.4
3,495,463	+		Pf1N1B4_3108	0.36	-1.4
3,495,463	+		Pf1N1B4_3108	0.36	+0.6
3,495,464	-		Pf1N1B4_3108	0.36	-1.7
3,495,471	+		Pf1N1B4_3108	0.37	+1.1
3,495,529	-		Pf1N1B4_3108	0.42	-1.7
3,495,551	+		Pf1N1B4_3108	0.44	-0.4
3,495,551	+		Pf1N1B4_3108	0.44	-1.4
3,495,551	+		Pf1N1B4_3108	0.44	-0.7
3,495,551	+		Pf1N1B4_3108	0.44	+0.6
3,495,551	+		Pf1N1B4_3108	0.44	-1.9
3,495,551	+		Pf1N1B4_3108	0.44	+2.0
3,495,792	+		Pf1N1B4_3108	0.66	+0.6
3,496,036	+		Pf1N1B4_3108	0.88	-0.9
3,496,036	+		Pf1N1B4_3108	0.88	+0.2
3,496,036	+		Pf1N1B4_3108	0.88	+0.2
3,496,036	+		Pf1N1B4_3108	0.88	-0.6
3,496,037	-		Pf1N1B4_3108	0.88	-0.6
3,496,037	-		Pf1N1B4_3108	0.88	-2.2
3,496,075	-				+0.6
3,496,107	+				+0.6
3,496,108	-				-1.2
3,496,193	+				-1.4
3,496,194	-				-1.9
3,496,194	-				-2.2
3,496,194	-				+0.3
3,496,194	-				+0.1
3,496,194	-				-1.7
3,496,281	+		Pf1N1B4_3109	0.12	-2.9
3,496,281	+		Pf1N1B4_3109	0.12	-1.4
3,496,281	+		Pf1N1B4_3109	0.12	+0.3
3,496,282	-		Pf1N1B4_3109	0.12	+0.6
3,496,326	+		Pf1N1B4_3109	0.17	+0.1
3,496,500	+		Pf1N1B4_3109	0.38	+0.6
3,496,551	+		Pf1N1B4_3109	0.44	-0.4
3,496,551	+				-0.9
3,496,551	+		Pf1N1B4_3109	0.44	+1.0
3,496,551	+		Pf1N1B4_3109	0.44	-1.1
3,496,551	+		Pf1N1B4_3109	0.44	-2.2
3,496,551	+		Pf1N1B4_3109	0.44	-0.9
3,496,551	+		Pf1N1B4_3109	0.44	-2.2
3,496,551	+		Pf1N1B4_3109	0.44	-0.4
3,496,551	+				-0.9
3,496,551	+		Pf1N1B4_3109	0.44	-1.4
3,496,552	-				+1.6
3,496,552	-		Pf1N1B4_3109	0.44	+1.2
3,496,552	-		Pf1N1B4_3109	0.44	-0.9
3,496,552	-		Pf1N1B4_3109	0.44	-0.6
3,496,552	-		Pf1N1B4_3109	0.44	+0.1
3,496,552	-		Pf1N1B4_3109	0.44	+1.6
3,496,552	-		Pf1N1B4_3109	0.44	-4.1
3,496,552	-		Pf1N1B4_3109	0.44	-0.4
3,496,552	-		Pf1N1B4_3109	0.44	-2.5
3,496,552	-		Pf1N1B4_3109	0.44	-0.6
3,496,959	+				-1.0
3,496,959	+				-0.8
3,496,959	+				+0.6
3,496,959	+				-2.4
3,496,959	+				-1.5
3,496,959	+				-1.4
3,496,959	+				+1.1
3,496,959	+				-0.8
3,496,960	-				+1.5
3,497,014	+				-0.5
3,497,022	+				-0.9
3,497,181	+				-0.4
3,497,181	+				-2.8
3,497,182	-				-1.7
3,497,200	+				+0.4
3,497,200	+				+1.1
3,497,201	-				-0.4
3,497,201	-				-0.9
3,497,201	-				+2.2
3,497,741	-				+0.4
3,497,811	+				+1.0
3,497,933	-		Pf1N1B4_3111	0.21	-0.4