Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2924

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
3,280,995	+				-0.9
3,280,996	-				-0.3
3,280,999	+				+0.3
3,281,020	+				+2.9
3,281,055	+				-0.5
3,281,055	+				+0.3
3,281,055	+				+1.0
3,281,056	-				-1.6
3,281,056	-				-0.0
3,281,057	+				+1.3
3,281,057	+				+1.3
3,281,058	-				+0.3
3,281,079	+				+0.5
3,281,079	+				-0.6
3,281,088	+				-1.1
3,281,088	+				-1.6
3,281,089	-				-2.2
3,281,117	-				+1.7
3,281,128	+				-0.7
3,281,235	+		Pf1N1B4_2923	0.23	-1.4
3,281,319	+		Pf1N1B4_2923	0.39	+0.6
3,281,319	+		Pf1N1B4_2923	0.39	+1.5
3,281,319	+		Pf1N1B4_2923	0.39	+0.2
3,281,319	+		Pf1N1B4_2923	0.39	-0.1
3,281,319	+		Pf1N1B4_2923	0.39	+0.3
3,281,319	+		Pf1N1B4_2923	0.39	-0.9
3,281,320	-		Pf1N1B4_2923	0.39	-1.3
3,281,325	+		Pf1N1B4_2923	0.40	+1.5
3,281,325	+		Pf1N1B4_2923	0.40	+0.6
3,281,385	+		Pf1N1B4_2923	0.51	-0.9
3,281,385	+		Pf1N1B4_2923	0.51	-1.9
3,281,385	+		Pf1N1B4_2923	0.51	+1.1
3,281,415	+		Pf1N1B4_2923	0.57	+0.5
3,281,415	+		Pf1N1B4_2923	0.57	-1.9
3,281,415	+		Pf1N1B4_2923	0.57	-0.2
3,281,563	-		Pf1N1B4_2923	0.86	-0.2
3,281,563	-		Pf1N1B4_2923	0.86	-0.4
3,281,563	-		Pf1N1B4_2923	0.86	-0.3
3,281,599	+				-1.1
3,281,599	+				+1.4
3,281,600	-				-0.5
3,281,600	-				-1.2
3,281,607	+				-0.9
3,281,607	+				-0.3
3,281,607	+				-0.9
3,281,607	+				+2.3
3,281,608	-				+0.3
3,281,608	-				-0.5
3,281,619	+				+0.0
3,281,619	+				-2.7
3,281,620	-				-0.3
3,281,634	+				-0.3
3,281,634	+				-0.3
3,281,634	+				+0.0
3,281,642	-				-0.9
3,281,652	+				+0.7
3,281,652	+				+1.0
3,281,652	+				+0.3
3,281,653	-				-0.3
3,281,653	-				-0.7
3,281,766	+				+0.3
3,281,766	+				-0.5
3,281,767	-				+2.0
3,281,864	+		Pf1N1B4_2924	0.30	-0.9
3,281,864	+		Pf1N1B4_2924	0.30	-0.8
3,281,865	-		Pf1N1B4_2924	0.30	-1.6
3,281,865	-		Pf1N1B4_2924	0.30	+1.5
3,281,865	-		Pf1N1B4_2924	0.30	-1.3
3,282,070	-				+1.3
3,282,070	-				-0.9
3,282,070	-				+1.7
3,282,070	-				-0.3
3,282,090	+		Pf1N1B4_2925	0.79	-1.3
3,282,090	+		Pf1N1B4_2925	0.79	+0.7
3,282,090	+		Pf1N1B4_2925	0.79	+1.5
3,282,091	-				+0.1
3,282,091	-		Pf1N1B4_2925	0.80	-0.7
3,282,091	-		Pf1N1B4_2925	0.80	+0.3
3,282,091	-		Pf1N1B4_2925	0.80	-0.5
3,282,297	-		Pf1N1B4_2926	0.21	+1.4
3,282,364	-		Pf1N1B4_2926	0.30	+0.5
3,282,379	+		Pf1N1B4_2926	0.32	-0.6
3,282,379	+				-0.9
3,282,461	+		Pf1N1B4_2926	0.43	+0.7
3,282,461	+		Pf1N1B4_2926	0.43	-1.6
3,282,488	+		Pf1N1B4_2926	0.47	-0.5
3,282,488	+				-0.3
3,282,488	+		Pf1N1B4_2926	0.47	+0.0
3,282,488	+		Pf1N1B4_2926	0.47	+0.4
3,282,489	-		Pf1N1B4_2926	0.47	-0.4
3,282,489	-		Pf1N1B4_2926	0.47	-0.3
3,282,489	-		Pf1N1B4_2926	0.47	-0.1
3,282,489	-		Pf1N1B4_2926	0.47	+1.3
3,282,566	+		Pf1N1B4_2926	0.57	+0.1
3,282,566	+				+2.0
3,282,566	+		Pf1N1B4_2926	0.57	-0.9
3,282,566	+		Pf1N1B4_2926	0.57	+0.7
3,282,566	+		Pf1N1B4_2926	0.57	-0.7
3,282,566	+		Pf1N1B4_2926	0.57	-1.3
3,282,567	-		Pf1N1B4_2926	0.57	+0.5
3,282,638	+		Pf1N1B4_2926	0.67	-0.2
3,282,638	+		Pf1N1B4_2926	0.67	-0.3
3,282,639	-		Pf1N1B4_2926	0.67	+0.1
3,282,906	+				+0.7
3,282,906	+				-0.9
3,282,907	-				+1.9
3,282,907	-				+0.4
3,282,907	-				-0.6
3,282,907	-				-0.7
3,282,907	-				-0.1
3,282,907	-				+0.5
3,282,907	-				-1.4
3,282,928	+				-0.1
3,282,928	+				+0.2
3,282,928	+				-0.6
3,282,928	+				+1.0
3,282,929	-				-0.9
3,282,929	-				-0.5
3,282,929	-				+2.3
3,282,929	-				-0.4
3,282,955	+				-0.3
3,282,955	+				+0.7
3,282,955	+				+0.3
3,282,955	+				+0.1
3,282,956	-				+2.7
3,282,956	-				+0.9
3,282,956	-				-0.1
3,282,959	+				+0.3
3,282,959	+				+0.2
3,282,960	-				+0.2
3,282,960	-				+0.1