Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2433

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,757,510	+		Pf1N1B4_2432	0.11	-0.6
2,757,619	+		Pf1N1B4_2432	0.23	-0.7
2,757,811	-		Pf1N1B4_2432	0.43	+1.4
2,758,088	+		Pf1N1B4_2432	0.72	-0.1
2,758,132	+		Pf1N1B4_2432	0.77	+1.9
2,758,132	+		Pf1N1B4_2432	0.77	-0.5
2,758,180	-		Pf1N1B4_2432	0.82	-1.3
2,758,279	-				-0.3
2,758,348	-				-0.9
2,758,488	+				+2.5
2,758,489	-				-0.7
2,758,521	+				-1.7
2,758,522	-				-1.9
2,758,522	-				-0.4
2,758,522	-				-0.5
2,758,537	-		Pf1N1B4_2433	0.12	-2.1
2,758,537	-		Pf1N1B4_2433	0.12	+0.3
2,758,660	+		Pf1N1B4_2433	0.41	-1.1
2,758,660	+		Pf1N1B4_2433	0.41	-1.7
2,758,661	-		Pf1N1B4_2433	0.42	+0.5
2,758,661	-		Pf1N1B4_2433	0.42	-0.4
2,758,661	-		Pf1N1B4_2433	0.42	+0.6
2,758,661	-		Pf1N1B4_2433	0.42	-1.1
2,758,937	+				-1.1
2,758,937	+				-0.5
2,758,937	+				-1.7
2,758,938	-				-1.7
2,758,938	-				-0.1
2,758,945	+				-0.9
2,758,945	+				-0.7
2,758,945	+				-0.4
2,759,076	+		Pf1N1B4_2434	0.52	+1.0
2,759,077	-		Pf1N1B4_2434	0.53	+0.1
2,759,180	+				+1.4
2,759,180	+				+1.9
2,759,180	+				-1.1
2,759,181	-				+0.1
2,759,181	-				-0.4
2,759,181	-				+0.5
2,759,181	-				+0.5
2,759,181	-				+1.5
2,759,247	+				-0.7
2,759,248	-				-0.1
2,759,248	-				+0.0
2,759,248	-				-0.1
2,759,248	-				+0.2
2,759,281	+		Pf1N1B4_2435	0.25	+0.3
2,759,317	+		Pf1N1B4_2435	0.48	+0.3
2,759,317	+		Pf1N1B4_2435	0.48	+0.3
2,759,329	+		Pf1N1B4_2435	0.56	-0.8
2,759,352	+		Pf1N1B4_2435	0.71	-0.6
2,759,353	-		Pf1N1B4_2435	0.72	+0.1
2,759,384	+				+0.1
2,759,384	+				-0.6
2,759,384	+				-0.7
2,759,384	+				-0.1
2,759,384	+				-2.5
2,759,384	+				-0.1
2,759,385	-				+0.5
2,759,503	+				+0.3
2,759,590	+				+0.9
2,759,622	+				-1.7
2,759,659	+				-0.7
2,759,660	-				-1.1
2,759,670	-				+0.4