Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2372

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,686,840	+				+1.1
2,686,841	-				-1.1
2,686,949	-				-1.1
2,686,995	+				-0.5
2,686,995	+				-0.1
2,686,995	+				+0.9
2,687,006	+				+0.9
2,687,006	+				-0.1
2,687,007	-				+0.4
2,687,017	+				+0.2
2,687,017	+				-0.6
2,687,018	-				+0.0
2,687,018	-				+0.6
2,687,018	-				+0.1
2,687,028	+				+0.9
2,687,066	+				-0.1
2,687,066	+				+0.3
2,687,066	+				-0.7
2,687,066	+				+0.9
2,687,066	+				-1.1
2,687,066	+				+1.2
2,687,066	+				+0.0
2,687,066	+				+0.1
2,687,066	+				-0.3
2,687,066	+				-0.8
2,687,066	+				+0.2
2,687,066	+				+0.4
2,687,066	+				-0.1
2,687,066	+				-0.1
2,687,066	+				+0.0
2,687,066	+				+0.5
2,687,066	+				-1.1
2,687,067	-				-0.1
2,687,067	-				+0.1
2,687,067	-				-2.4
2,687,067	-				-1.5
2,687,067	-				+0.9
2,687,067	-				-0.1
2,687,067	-				+0.3
2,687,067	-				+0.2
2,687,067	-				+0.4
2,687,067	-				-0.7
2,687,067	-				+1.3
2,687,067	-				+0.9
2,687,067	-				-1.0
2,687,067	-				-0.6
2,687,067	-				+0.9
2,687,067	-				-1.3
2,687,067	-				-0.0
2,687,067	-				-0.9
2,687,072	+				-0.5
2,687,072	+				-0.4
2,687,072	+				-1.7
2,687,072	+				-0.7
2,687,072	+				+0.9
2,687,072	+				-2.3
2,687,072	+				+0.3
2,687,072	+				+0.6
2,687,072	+				+0.5
2,687,072	+				-0.3
2,687,073	-				+0.6
2,687,073	-				+0.1
2,687,073	-				+0.9
2,687,073	-				+1.9
2,687,201	+		Pf1N1B4_2371	0.21	-0.3
2,687,225	+		Pf1N1B4_2371	0.25	-0.7
2,687,226	-		Pf1N1B4_2371	0.25	-0.6
2,687,244	-		Pf1N1B4_2371	0.28	-0.3
2,687,244	-		Pf1N1B4_2371	0.28	+1.4
2,687,303	+		Pf1N1B4_2371	0.38	+0.4
2,687,304	-		Pf1N1B4_2371	0.38	+1.5
2,687,324	+		Pf1N1B4_2371	0.41	-1.1
2,687,325	-		Pf1N1B4_2371	0.41	-0.2
2,687,325	-		Pf1N1B4_2371	0.41	+1.1
2,687,462	+		Pf1N1B4_2371	0.64	-0.1
2,687,462	+		Pf1N1B4_2371	0.64	+0.7
2,687,463	-		Pf1N1B4_2371	0.64	-0.5
2,687,505	+		Pf1N1B4_2371	0.71	-0.3
2,687,561	+		Pf1N1B4_2371	0.80	+1.1
2,687,561	+				-0.1
2,687,561	+		Pf1N1B4_2371	0.80	+0.1
2,687,561	+		Pf1N1B4_2371	0.80	+0.7
2,687,561	+		Pf1N1B4_2371	0.80	-0.1
2,687,561	+		Pf1N1B4_2371	0.80	+0.3
2,687,561	+		Pf1N1B4_2371	0.80	-1.2
2,687,561	+		Pf1N1B4_2371	0.80	+0.9
2,687,561	+		Pf1N1B4_2371	0.80	+2.2
2,687,562	-				+0.9
2,687,562	-		Pf1N1B4_2371	0.80	-1.4
2,687,675	+				-0.4
2,687,675	+				+0.8
2,687,675	+				+0.9
2,687,675	+				+0.1
2,687,676	-				-0.3
2,687,676	-				-0.5
2,687,684	+				+0.3
2,687,684	+				-0.1
2,687,684	+				-1.9
2,687,700	+				-2.1
2,687,700	+				+0.9
2,687,701	-				+0.1
2,687,701	-				+0.1
2,687,902	+		Pf1N1B4_2372	0.16	-1.4
2,688,031	+		Pf1N1B4_2372	0.30	-2.4
2,688,051	+		Pf1N1B4_2372	0.32	+0.6
2,688,052	-		Pf1N1B4_2372	0.32	-1.4
2,688,052	-		Pf1N1B4_2372	0.32	-0.1
2,688,082	+		Pf1N1B4_2372	0.35	-0.1
2,688,082	+		Pf1N1B4_2372	0.35	-1.6
2,688,082	+		Pf1N1B4_2372	0.35	-1.8
2,688,082	+		Pf1N1B4_2372	0.35	-0.4
2,688,083	-		Pf1N1B4_2372	0.35	+0.6
2,688,083	-		Pf1N1B4_2372	0.35	-0.9
2,688,083	-		Pf1N1B4_2372	0.35	-0.6
2,688,083	-		Pf1N1B4_2372	0.35	-2.6
2,688,083	-		Pf1N1B4_2372	0.35	-0.9
2,688,083	-		Pf1N1B4_2372	0.35	+0.3
2,688,729	+				+0.9
2,688,746	+				-0.5
2,688,747	-				-1.4
2,688,778	-				-0.4
2,688,778	-				-0.5
2,688,778	-				+1.8
2,688,870	+				+0.0
2,688,870	+				-1.3
2,688,967	-		Pf1N1B4_2373	0.12	-1.0
2,688,973	-		Pf1N1B4_2373	0.13	+0.9
2,689,163	-		Pf1N1B4_2373	0.28	+0.2
2,689,309	+		Pf1N1B4_2373	0.40	+0.3
2,689,309	+		Pf1N1B4_2373	0.40	-0.7
2,689,309	+		Pf1N1B4_2373	0.40	+1.9
2,689,309	+		Pf1N1B4_2373	0.40	-0.7
2,689,309	+		Pf1N1B4_2373	0.40	+0.3
2,689,310	-		Pf1N1B4_2373	0.40	-0.3
2,689,310	-		Pf1N1B4_2373	0.40	+1.1
2,689,310	-		Pf1N1B4_2373	0.40	-0.4
2,689,377	+		Pf1N1B4_2373	0.45	+0.4
2,689,377	+		Pf1N1B4_2373	0.45	+0.5
2,689,377	+		Pf1N1B4_2373	0.45	+0.5
2,689,378	-		Pf1N1B4_2373	0.45	-0.7
2,689,537	+		Pf1N1B4_2373	0.58	+0.4
2,689,537	+		Pf1N1B4_2373	0.58	-0.1
2,689,632	+		Pf1N1B4_2373	0.66	-0.1
2,689,692	+		Pf1N1B4_2373	0.71	+0.3
2,689,692	+		Pf1N1B4_2373	0.71	+0.5