Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2097

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,403,538	+				+0.7
2,403,538	+				-1.2
2,403,538	+				-0.3
2,403,539	-				-0.6
2,403,539	-				+0.7
2,403,539	-				-2.2
2,403,539	-				+0.3
2,403,539	-				+0.3
2,403,539	-				-0.0
2,403,539	-				+0.3
2,403,591	+				+1.6
2,403,591	+				-1.3
2,403,592	-				+0.3
2,403,592	-				+1.4
2,403,601	-				+1.0
2,403,990	+		Pf1N1B4_2096	0.51	-0.2
2,403,991	-		Pf1N1B4_2096	0.51	+0.2
2,404,014	+		Pf1N1B4_2096	0.54	-0.0
2,404,014	+		Pf1N1B4_2096	0.54	+0.5
2,404,015	-		Pf1N1B4_2096	0.54	+0.3
2,404,210	-		Pf1N1B4_2096	0.81	+1.0
2,404,210	-		Pf1N1B4_2096	0.81	+0.1
2,404,409	+				-0.2
2,404,409	+				+0.1
2,404,409	+				-0.0
2,404,409	+				-0.3
2,404,410	-				+1.0
2,404,610	+		Pf1N1B4_2097	0.26	-0.6
2,404,610	+		Pf1N1B4_2097	0.26	-0.1
2,404,610	+		Pf1N1B4_2097	0.26	+1.7
2,404,611	-		Pf1N1B4_2097	0.26	-1.1
2,404,611	-		Pf1N1B4_2097	0.26	+2.6
2,404,611	-		Pf1N1B4_2097	0.26	-0.5
2,404,611	-		Pf1N1B4_2097	0.26	-1.6
2,404,627	-		Pf1N1B4_2097	0.28	-1.3
2,404,627	-		Pf1N1B4_2097	0.28	-1.3
2,404,771	+		Pf1N1B4_2097	0.42	+0.5
2,404,884	-		Pf1N1B4_2097	0.53	-1.3
2,405,105	+		Pf1N1B4_2097	0.75	-0.0
2,405,106	-		Pf1N1B4_2097	0.75	-0.9
2,405,126	+		Pf1N1B4_2097	0.77	-1.0
2,405,127	-		Pf1N1B4_2097	0.77	-0.8
2,405,127	-		Pf1N1B4_2097	0.77	-1.6
2,405,127	-		Pf1N1B4_2097	0.77	-0.5
2,405,224	-		Pf1N1B4_2097	0.87	-0.4
2,405,387	+				+2.0
2,405,387	+				+0.4
2,405,387	+				+0.3
2,405,388	-				-0.0
2,405,388	-				-0.0
2,405,388	-				+1.3
2,405,388	-				+1.0
2,405,388	-				+0.7
2,405,388	-				-0.0
2,405,388	-				+0.7
2,405,388	-				-0.2
2,405,388	-				+0.3
2,405,388	-				-2.3
2,405,388	-				-1.2
2,405,388	-				-0.0
2,405,436	+				-0.8
2,405,437	-				-0.3
2,405,437	-				-1.2
2,405,437	-				-2.3
2,405,437	-				-2.0
2,405,437	-				-1.2
2,405,437	-				-0.6
2,405,712	+		Pf1N1B4_2098	0.16	-0.8
2,405,712	+		Pf1N1B4_2098	0.16	+0.6
2,405,713	-		Pf1N1B4_2098	0.16	+0.3
2,405,821	-		Pf1N1B4_2098	0.21	-0.0
2,405,833	-		Pf1N1B4_2098	0.22	-0.9
2,405,833	-		Pf1N1B4_2098	0.22	-1.3
2,405,833	-		Pf1N1B4_2098	0.22	+2.4
2,405,882	+		Pf1N1B4_2098	0.24	-0.2
2,405,883	-		Pf1N1B4_2098	0.24	-0.6
2,405,889	+				-0.6
2,405,976	+		Pf1N1B4_2098	0.29	-0.7
2,405,976	+		Pf1N1B4_2098	0.29	-0.0
2,405,976	+		Pf1N1B4_2098	0.29	+2.2
2,405,977	-		Pf1N1B4_2098	0.29	+0.2
2,405,977	-		Pf1N1B4_2098	0.29	-1.2
2,405,977	-		Pf1N1B4_2098	0.29	+0.3
2,405,980	+		Pf1N1B4_2098	0.29	-1.6
2,405,980	+		Pf1N1B4_2098	0.29	-0.1
2,405,980	+		Pf1N1B4_2098	0.29	-0.6
2,405,980	+		Pf1N1B4_2098	0.29	-0.6
2,405,980	+		Pf1N1B4_2098	0.29	+1.0
2,405,980	+		Pf1N1B4_2098	0.29	+0.8
2,405,980	+		Pf1N1B4_2098	0.29	-0.5
2,405,981	-		Pf1N1B4_2098	0.29	-0.7
2,405,981	-		Pf1N1B4_2098	0.29	-1.6
2,405,981	-		Pf1N1B4_2098	0.29	-0.0
2,405,981	-		Pf1N1B4_2098	0.29	-0.0
2,405,981	-		Pf1N1B4_2098	0.29	-0.2
2,406,072	+				+0.8
2,406,073	-		Pf1N1B4_2098	0.34	+0.2
2,406,111	+		Pf1N1B4_2098	0.35	+0.6
2,406,111	+		Pf1N1B4_2098	0.35	-1.2
2,406,112	-		Pf1N1B4_2098	0.36	-0.4
2,406,112	-		Pf1N1B4_2098	0.36	-0.2
2,406,112	-		Pf1N1B4_2098	0.36	-1.0
2,406,112	-		Pf1N1B4_2098	0.36	+0.6
2,406,113	+		Pf1N1B4_2098	0.36	-2.0
2,406,114	-		Pf1N1B4_2098	0.36	-0.4
2,406,154	-		Pf1N1B4_2098	0.38	-1.3
2,406,335	-		Pf1N1B4_2098	0.46	-0.1