Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1960

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
2,239,145	+		Pf1N1B4_1959	0.20	-0.2
2,239,145	+		Pf1N1B4_1959	0.20	+0.7
2,239,146	-		Pf1N1B4_1959	0.20	-0.3
2,239,146	-		Pf1N1B4_1959	0.20	-0.6
2,239,146	-		Pf1N1B4_1959	0.20	+1.6
2,239,146	-		Pf1N1B4_1959	0.20	-0.1
2,239,146	-		Pf1N1B4_1959	0.20	-0.3
2,239,146	-		Pf1N1B4_1959	0.20	-0.1
2,239,190	+		Pf1N1B4_1959	0.24	+0.2
2,239,191	-		Pf1N1B4_1959	0.24	+0.5
2,239,249	+		Pf1N1B4_1959	0.29	-1.0
2,239,249	+				-1.6
2,239,249	+		Pf1N1B4_1959	0.29	-1.6
2,239,249	+		Pf1N1B4_1959	0.29	+0.3
2,239,250	-		Pf1N1B4_1959	0.29	+0.6
2,239,250	-		Pf1N1B4_1959	0.29	+2.2
2,239,250	-		Pf1N1B4_1959	0.29	-0.6
2,239,250	-				+2.6
2,239,259	+		Pf1N1B4_1959	0.30	+0.4
2,239,317	+		Pf1N1B4_1959	0.35	+1.3
2,239,318	-		Pf1N1B4_1959	0.35	-0.0
2,239,395	-				+1.0
2,239,439	+		Pf1N1B4_1959	0.46	-0.2
2,239,439	+		Pf1N1B4_1959	0.46	+1.3
2,239,439	+		Pf1N1B4_1959	0.46	+0.1
2,239,439	+		Pf1N1B4_1959	0.46	-1.5
2,239,439	+		Pf1N1B4_1959	0.46	-0.0
2,239,440	-		Pf1N1B4_1959	0.46	-0.2
2,239,440	-		Pf1N1B4_1959	0.46	-1.8
2,239,440	-		Pf1N1B4_1959	0.46	-0.2
2,239,440	-		Pf1N1B4_1959	0.46	-1.3
2,239,440	-		Pf1N1B4_1959	0.46	-2.2
2,239,440	-		Pf1N1B4_1959	0.46	-0.0
2,239,473	+		Pf1N1B4_1959	0.49	-0.3
2,239,473	+		Pf1N1B4_1959	0.49	-1.9
2,239,604	+		Pf1N1B4_1959	0.60	+0.4
2,239,604	+		Pf1N1B4_1959	0.60	-0.7
2,239,604	+		Pf1N1B4_1959	0.60	-0.6
2,239,604	+		Pf1N1B4_1959	0.60	-0.7
2,239,604	+		Pf1N1B4_1959	0.60	+0.4
2,239,604	+		Pf1N1B4_1959	0.60	-0.6
2,239,604	+		Pf1N1B4_1959	0.60	+2.0
2,239,604	+		Pf1N1B4_1959	0.60	+0.1
2,239,604	+		Pf1N1B4_1959	0.60	+0.4
2,239,604	+		Pf1N1B4_1959	0.60	-1.3
2,239,604	+		Pf1N1B4_1959	0.60	-0.3
2,239,604	+		Pf1N1B4_1959	0.60	+0.4
2,239,604	+		Pf1N1B4_1959	0.60	-0.7
2,239,604	+		Pf1N1B4_1959	0.60	-0.8
2,239,605	-		Pf1N1B4_1959	0.60	+0.6
2,239,605	-		Pf1N1B4_1959	0.60	+0.8
2,239,605	-		Pf1N1B4_1959	0.60	+0.1
2,239,605	-		Pf1N1B4_1959	0.60	-0.4
2,239,605	-		Pf1N1B4_1959	0.60	-0.5
2,239,605	-		Pf1N1B4_1959	0.60	-0.9
2,239,605	-				+2.0
2,239,605	-		Pf1N1B4_1959	0.60	-1.0
2,239,605	-		Pf1N1B4_1959	0.60	-1.5
2,239,605	-				+1.0
2,239,605	-		Pf1N1B4_1959	0.60	-0.3
2,239,608	+		Pf1N1B4_1959	0.61	+0.3
2,239,608	+		Pf1N1B4_1959	0.61	+0.3
2,239,608	+		Pf1N1B4_1959	0.61	-1.3
2,239,608	+		Pf1N1B4_1959	0.61	-0.2
2,239,608	+		Pf1N1B4_1959	0.61	+0.7
2,239,609	-		Pf1N1B4_1959	0.61	+0.7
2,239,609	-		Pf1N1B4_1959	0.61	+1.2
2,239,609	-		Pf1N1B4_1959	0.61	+0.5
2,239,709	+		Pf1N1B4_1959	0.70	-0.0
2,239,709	+		Pf1N1B4_1959	0.70	-0.1
2,239,709	+		Pf1N1B4_1959	0.70	-1.3
2,239,710	-		Pf1N1B4_1959	0.70	-0.6
2,239,710	-		Pf1N1B4_1959	0.70	+0.1
2,239,717	+		Pf1N1B4_1959	0.70	+1.5
2,239,717	+		Pf1N1B4_1959	0.70	+1.1
2,239,717	+		Pf1N1B4_1959	0.70	-1.0
2,239,781	+		Pf1N1B4_1959	0.76	-2.0
2,239,781	+		Pf1N1B4_1959	0.76	-1.0
2,239,781	+		Pf1N1B4_1959	0.76	-1.3
2,239,782	-		Pf1N1B4_1959	0.76	-0.7
2,239,782	-		Pf1N1B4_1959	0.76	-0.0
2,239,836	-		Pf1N1B4_1959	0.81	-0.3
2,239,978	+				+0.3
2,239,979	-				+0.3
2,240,024	+				+0.1
2,240,025	-				-0.6
2,240,025	-				-0.1
2,240,025	-				+0.3
2,240,025	-				+0.4
2,240,116	+				+1.3
2,240,116	+				+1.4
2,240,116	+				+1.0
2,240,223	+		Pf1N1B4_1960	0.15	-1.8
2,240,225	+		Pf1N1B4_1960	0.15	-0.6
2,240,225	+		Pf1N1B4_1960	0.15	+1.0
2,240,225	+		Pf1N1B4_1960	0.15	-2.9
2,240,225	+		Pf1N1B4_1960	0.15	-0.0
2,240,225	+		Pf1N1B4_1960	0.15	-0.9
2,240,225	+		Pf1N1B4_1960	0.15	-2.3
2,240,225	+		Pf1N1B4_1960	0.15	-0.4
2,240,225	+		Pf1N1B4_1960	0.15	+1.6
2,240,225	+		Pf1N1B4_1960	0.15	-1.5
2,240,226	-		Pf1N1B4_1960	0.15	-0.0
2,240,226	-		Pf1N1B4_1960	0.15	-0.6
2,240,226	-		Pf1N1B4_1960	0.15	-0.3
2,240,226	-		Pf1N1B4_1960	0.15	+0.2
2,240,226	-		Pf1N1B4_1960	0.15	+0.4
2,240,226	-		Pf1N1B4_1960	0.15	-1.1
2,240,226	-		Pf1N1B4_1960	0.15	-1.3
2,240,575	+		Pf1N1B4_1960	0.46	+1.2
2,240,625	+		Pf1N1B4_1960	0.51	-0.6
2,240,625	+		Pf1N1B4_1960	0.51	+0.7
2,240,625	+		Pf1N1B4_1960	0.51	-1.0
2,240,683	+		Pf1N1B4_1960	0.56	-1.2
2,240,683	+		Pf1N1B4_1960	0.56	-1.0
2,240,684	-		Pf1N1B4_1960	0.56	+1.0
2,240,684	-		Pf1N1B4_1960	0.56	-0.0
2,240,735	+		Pf1N1B4_1960	0.60	-0.6
2,240,735	+				+1.0
2,240,735	+		Pf1N1B4_1960	0.60	-0.0
2,240,736	-		Pf1N1B4_1960	0.60	-0.6
2,240,736	-		Pf1N1B4_1960	0.60	+0.9
2,240,831	+		Pf1N1B4_1960	0.69	-1.5
2,240,975	+		Pf1N1B4_1960	0.82	-0.3
2,240,976	-		Pf1N1B4_1960	0.82	-0.3
2,240,987	-		Pf1N1B4_1960	0.83	-2.3
2,241,125	+				-0.0
2,241,125	+				+0.2
2,241,125	+				-1.6
2,241,125	+				-1.1
2,241,126	-				-2.0
2,241,369	+		Pf1N1B4_1961	0.15	-2.5
2,241,389	+		Pf1N1B4_1961	0.16	+1.0
2,241,390	-		Pf1N1B4_1961	0.16	+1.0
2,241,450	-		Pf1N1B4_1961	0.21	-0.7
2,241,477	+		Pf1N1B4_1961	0.23	-0.2
2,241,477	+		Pf1N1B4_1961	0.23	+1.7
2,241,477	+		Pf1N1B4_1961	0.23	-1.2
2,241,478	-		Pf1N1B4_1961	0.23	+0.4
2,241,510	+		Pf1N1B4_1961	0.25	-0.6
2,241,511	-		Pf1N1B4_1961	0.25	+0.1
2,241,511	-		Pf1N1B4_1961	0.25	-0.3
2,241,511	-		Pf1N1B4_1961	0.25	-0.0
2,241,687	+		Pf1N1B4_1961	0.38	-0.7
2,241,688	-		Pf1N1B4_1961	0.38	+0.5
2,241,822	+		Pf1N1B4_1961	0.48	-0.7
2,241,823	-		Pf1N1B4_1961	0.48	-0.4
2,241,823	-		Pf1N1B4_1961	0.48	-1.7
2,241,915	+		Pf1N1B4_1961	0.55	+0.2
2,241,916	-		Pf1N1B4_1961	0.55	+0.7
2,241,981	+		Pf1N1B4_1961	0.60	+0.4
2,241,981	+		Pf1N1B4_1961	0.60	+0.1
2,241,981	+		Pf1N1B4_1961	0.60	+0.6
2,241,981	+		Pf1N1B4_1961	0.60	+0.7
2,241,982	-		Pf1N1B4_1961	0.60	-0.0
2,242,014	+		Pf1N1B4_1961	0.62	+0.5
2,242,014	+		Pf1N1B4_1961	0.62	+0.1
2,242,014	+		Pf1N1B4_1961	0.62	+0.5
2,242,015	-		Pf1N1B4_1961	0.62	+2.3
2,242,015	-		Pf1N1B4_1961	0.62	+1.5
2,242,015	-		Pf1N1B4_1961	0.62	-0.9
2,242,015	-		Pf1N1B4_1961	0.62	+1.2