Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1558

Experiment: methylglyoxal 0.004 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.004 vol%
1,796,859	+		Pf1N1B4_1557	0.48	+1.4
1,796,860	-				+0.9
1,796,995	+		Pf1N1B4_1557	0.56	+1.5
1,796,995	+		Pf1N1B4_1557	0.56	+0.9
1,796,995	+		Pf1N1B4_1557	0.56	-0.5
1,796,996	-		Pf1N1B4_1557	0.56	-0.9
1,796,996	-		Pf1N1B4_1557	0.56	+0.2
1,797,019	-		Pf1N1B4_1557	0.57	+0.0
1,797,019	-		Pf1N1B4_1557	0.57	+0.2
1,797,019	-		Pf1N1B4_1557	0.57	+0.6
1,797,019	-		Pf1N1B4_1557	0.57	-1.9
1,797,019	-		Pf1N1B4_1557	0.57	+1.7
1,797,019	-		Pf1N1B4_1557	0.57	+1.9
1,797,046	+		Pf1N1B4_1557	0.59	-0.7
1,797,047	-		Pf1N1B4_1557	0.59	+1.3
1,797,047	-		Pf1N1B4_1557	0.59	+1.3
1,797,186	+		Pf1N1B4_1557	0.67	-0.2
1,797,186	+		Pf1N1B4_1557	0.67	-0.3
1,797,186	+		Pf1N1B4_1557	0.67	+1.2
1,797,187	-		Pf1N1B4_1557	0.67	-2.1
1,797,187	-		Pf1N1B4_1557	0.67	+0.6
1,797,197	+		Pf1N1B4_1557	0.68	-0.7
1,797,198	-		Pf1N1B4_1557	0.68	-1.1
1,797,201	+		Pf1N1B4_1557	0.68	-1.5
1,797,201	+		Pf1N1B4_1557	0.68	+1.2
1,797,201	+		Pf1N1B4_1557	0.68	+0.7
1,797,202	-		Pf1N1B4_1557	0.68	-0.2
1,797,202	-		Pf1N1B4_1557	0.68	-2.4
1,797,202	-		Pf1N1B4_1557	0.68	+0.2
1,797,241	-		Pf1N1B4_1557	0.71	-1.0
1,797,432	+		Pf1N1B4_1557	0.82	+0.7
1,797,445	+		Pf1N1B4_1557	0.83	-0.3
1,797,446	-		Pf1N1B4_1557	0.83	+2.5
1,797,446	-		Pf1N1B4_1557	0.83	-1.1
1,797,493	+		Pf1N1B4_1557	0.86	-0.1
1,797,493	+		Pf1N1B4_1557	0.86	+0.4
1,797,493	+		Pf1N1B4_1557	0.86	-1.1
1,797,494	-		Pf1N1B4_1557	0.86	+0.1
1,797,494	-		Pf1N1B4_1557	0.86	-0.4
1,797,494	-		Pf1N1B4_1557	0.86	-0.3
1,797,494	-		Pf1N1B4_1557	0.86	+0.9
1,797,494	-		Pf1N1B4_1557	0.86	-0.2
1,797,494	-		Pf1N1B4_1557	0.86	+0.7
1,797,494	-		Pf1N1B4_1557	0.86	+0.3
1,797,535	-		Pf1N1B4_1557	0.88	+0.6
1,797,535	-		Pf1N1B4_1557	0.88	-1.9
1,797,535	-		Pf1N1B4_1557	0.88	+1.2
1,797,535	-		Pf1N1B4_1557	0.88	-0.1
1,797,535	-		Pf1N1B4_1557	0.88	+0.4
1,797,535	-		Pf1N1B4_1557	0.88	-0.5
1,797,535	-		Pf1N1B4_1557	0.88	+0.2
1,797,535	-		Pf1N1B4_1557	0.88	+0.3
1,797,576	+				-1.7
1,797,576	+				-0.5
1,797,579	+				-1.2
1,797,580	-				+1.6
1,797,580	-				+0.1
1,797,580	-				+0.9
1,797,580	-				+0.2
1,797,603	-				+0.6
1,797,687	+				+0.3
1,797,688	-				+1.8
1,797,714	-				+0.9
1,797,717	+				-2.5
1,797,717	+				-2.1
1,797,717	+				-1.5
1,797,717	+				-0.7
1,797,718	-				-0.7
1,797,718	-				-1.4
1,797,718	-				+0.8
1,797,718	-				+0.9
1,797,718	-				+0.3
1,797,718	-				+2.5
1,797,718	-				+0.0
1,797,718	-				+0.7
1,797,740	-				-0.4
1,797,782	+				-0.7
1,797,782	+				+0.1
1,797,782	+				-0.5
1,797,911	+		Pf1N1B4_1558	0.19	-1.4
1,797,912	-		Pf1N1B4_1558	0.19	-0.4
1,797,912	-				-0.7
1,797,915	-		Pf1N1B4_1558	0.19	-0.9
1,798,026	-		Pf1N1B4_1558	0.37	-0.1
1,798,275	-		Pf1N1B4_1558	0.77	+0.4
1,798,319	+		Pf1N1B4_1558	0.85	-1.1
1,798,319	+		Pf1N1B4_1558	0.85	-0.4
1,798,319	+		Pf1N1B4_1558	0.85	-1.9
1,798,319	+		Pf1N1B4_1558	0.85	-0.4
1,798,445	+				+0.2
1,798,445	+				+1.5
1,798,446	-				-0.2
1,798,526	+				-1.1
1,798,526	+				+0.1
1,798,526	+				+1.1
1,798,526	+				-0.3
1,798,782	-		Pf1N1B4_1559	0.12	+1.7
1,798,904	-		Pf1N1B4_1559	0.28	-0.1
1,798,939	+		Pf1N1B4_1559	0.32	+0.9
1,799,339	-		Pf1N1B4_1559	0.83	-0.1
1,799,385	-		Pf1N1B4_1559	0.89	-0.4
1,799,413	-				+0.9
1,799,413	-				+0.9