Experiment: Chloride stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22640 and HSERO_RS22645 are separated by 159 nucleotides HSERO_RS22645 and HSERO_RS22650 are separated by 77 nucleotides
HSERO_RS22640: HSERO_RS22640 - porin, at 5,189,818 to 5,190,882
_RS22640
HSERO_RS22645: HSERO_RS22645 - lipase, at 5,191,042 to 5,192,130
_RS22645
HSERO_RS22650: HSERO_RS22650 - spermidine/putrescine ABC transporter permease, at 5,192,208 to 5,194,019
_RS22650
Position (kb) 5191
5192
5193 Strain fitness (log2 ratio) -2
-1
0
1 at 5190.057 kb on + strand, within HSERO_RS22640 at 5190.072 kb on - strand, within HSERO_RS22640 at 5190.219 kb on - strand, within HSERO_RS22640 at 5190.223 kb on + strand, within HSERO_RS22640 at 5190.297 kb on - strand, within HSERO_RS22640 at 5190.341 kb on - strand, within HSERO_RS22640 at 5190.354 kb on - strand, within HSERO_RS22640 at 5190.594 kb on + strand, within HSERO_RS22640 at 5190.761 kb on + strand, within HSERO_RS22640 at 5191.092 kb on + strand at 5191.475 kb on + strand, within HSERO_RS22645 at 5191.521 kb on + strand, within HSERO_RS22645 at 5191.556 kb on - strand, within HSERO_RS22645 at 5191.805 kb on - strand, within HSERO_RS22645 at 5191.999 kb on - strand, within HSERO_RS22645 at 5192.235 kb on - strand at 5192.305 kb on - strand at 5192.552 kb on + strand, within HSERO_RS22650 at 5192.552 kb on + strand, within HSERO_RS22650 at 5192.673 kb on + strand, within HSERO_RS22650 at 5192.750 kb on - strand, within HSERO_RS22650 at 5192.808 kb on + strand, within HSERO_RS22650 at 5192.814 kb on + strand, within HSERO_RS22650 at 5192.816 kb on - strand, within HSERO_RS22650 at 5192.838 kb on + strand, within HSERO_RS22650 at 5192.878 kb on + strand, within HSERO_RS22650 at 5192.886 kb on - strand, within HSERO_RS22650 at 5192.905 kb on + strand, within HSERO_RS22650
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride stress remove 5,190,057 + HSERO_RS22640 0.22 +0.4 5,190,072 - HSERO_RS22640 0.24 -0.5 5,190,219 - HSERO_RS22640 0.38 -0.1 5,190,223 + HSERO_RS22640 0.38 +0.4 5,190,297 - HSERO_RS22640 0.45 -0.6 5,190,341 - HSERO_RS22640 0.49 -0.2 5,190,354 - HSERO_RS22640 0.50 -0.0 5,190,594 + HSERO_RS22640 0.73 +1.0 5,190,761 + HSERO_RS22640 0.89 +0.0 5,191,092 + +0.5 5,191,475 + HSERO_RS22645 0.40 -0.1 5,191,521 + HSERO_RS22645 0.44 +0.0 5,191,556 - HSERO_RS22645 0.47 -0.1 5,191,805 - HSERO_RS22645 0.70 +0.2 5,191,999 - HSERO_RS22645 0.88 -0.0 5,192,235 - -0.0 5,192,305 - -0.7 5,192,552 + HSERO_RS22650 0.19 -1.9 5,192,552 + HSERO_RS22650 0.19 -0.1 5,192,673 + HSERO_RS22650 0.26 -0.1 5,192,750 - HSERO_RS22650 0.30 +0.4 5,192,808 + HSERO_RS22650 0.33 +0.6 5,192,814 + HSERO_RS22650 0.33 -0.7 5,192,816 - HSERO_RS22650 0.34 +0.3 5,192,838 + HSERO_RS22650 0.35 +0.1 5,192,878 + HSERO_RS22650 0.37 -0.6 5,192,886 - HSERO_RS22650 0.37 +1.1 5,192,905 + HSERO_RS22650 0.38 +0.1
Or see this region's nucleotide sequence